Strigops habroptila (Kakapo): 115612674
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Entry
115612674 CDS
T08851
Symbol
BRCC3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03440
Homologous recombination
shab04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115612674 (BRCC3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115612674 (BRCC3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shab01002
]
115612674 (BRCC3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115612674 (BRCC3)
03036 Chromosome and associated proteins [BR:
shab03036
]
115612674 (BRCC3)
03400 DNA repair and recombination proteins [BR:
shab03400
]
115612674 (BRCC3)
Peptidases and inhibitors [BR:
shab01002
]
Metallo peptidases
Family M67
115612674 (BRCC3)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
115612674 (BRCC3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
115612674 (BRCC3)
BRISC complex
115612674 (BRCC3)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
115612674 (BRCC3)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
115612674 (BRCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
Prok-JAB
BRCC36_C
UPF0172
REP_ORF2-G2P
Motif
Other DBs
NCBI-GeneID:
115612674
NCBI-ProteinID:
XP_030353121
LinkDB
All DBs
Position
9:complement(29396802..29402806)
Genome browser
AA seq
278 aa
AA seq
DB search
MAVQAVYLEADAFLVCLNHALSTEKEEVMGLCIGEVDTSRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRILYTCFQSIQAQKSSEYERIEIPIHVVPHETIGKVCLESAVEL
PKILCQEEQDAYRRIHSVHKEPLQPDVSHQWASPSVAGGQTRAEQTAGAGAAAGEGAAPG
GTRCLRMKEETQTLQKRDMRETLQDLLLAEGWPDIALQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaggctgtgtacttggaggctgacgcgttcctggtgtgcctgaaccatgcg
ctgagcaccgagaaggaggaggtcatggggctctgcatcggcgaggttgataccagccgc
atcgttcacatccactctgtgatcatcctgcgccgctcggataagaggaaggaccgtgtg
gagatttcaccagagcagctttcagctgcctctactgaagcggagaggttggctgaaatg
acaggacgtcccatgagagttgtgggctggtatcactctcatcctcacattactgtctgg
ccatcacatgttgatgtccgcacacaagcgatgtatcagatgatggaccaaggtttcgta
gggcttatcttttcctgcttcatcgaggacaaaaacacaaagacaggcaggattctctac
acctgtttccagtccattcaggcccagaagagctcagaatatgaaaggatcgaaattcct
attcacgttgtcccccatgaaaccattgggaaagtgtgtctggaatcagctgtagagctg
cccaagatcctttgccaagaagagcaagatgcctacagaagaattcacagtgttcacaaa
gaacctctgcagccagatgtcagccatcagtgggcctctccttcagtggctggaggacag
actagagcagaacaaacagcgggtgcaggagctgcagcaggagaaggagcagctcctgga
ggaactcgctgccttagaatgaaagaggaaacgcagacccttcagaaaagagacatgaga
gaaactctgcaagacctactcctggctgaagggtggcctgacattgccttacagtga
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