Strigops habroptila (Kakapo): 115612685
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Entry
115612685 CDS
T08851
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115612685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115612685
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115612685
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Motif
Other DBs
NCBI-GeneID:
115612685
NCBI-ProteinID:
XP_030353138
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Position
9:29809874..29818778
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AA seq
574 aa
AA seq
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MSQFSFGTGAAGGGFALGTPSTAATTTATATAGFSFASSAPAASGGFSFGSAAQTAASSQ
PSGLFSFSRPAATAAQPAGFSFGTPGTGSAAPAASVFQLGANAPKLSFGGSAAAPATGIT
GGFAFGSSAPTSAPSSQAAAPSGFVFGSAGTSTTAQSGTTGGFTFSSSTTTQAGAANVSI
GAAAPQTAPAGLSFGAAPAAAATSAATLGAATQSAAPFSLGGQSTGLNFGSLTSTAATSV
PTATLTTSTSSGPALSFGAKLGVTSTAATTASTSTTSVLGSTGPTLFASVASSAAPASST
TTGLSLGAPSTGTASLGTLGFGLKAPGTTSAATTSTATGTTTASGFALNLKPLTTTGATG
AVTSTAAITTTTSTSAPPVMTYAQLESLINKWSLELEDQEKHFLHQATQVNAWDQTLIEN
GEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLTPLEESVKEQSGTIYLQHADE
ERERTYKLAENIDAQLKRMAQDLKDITEHLNTSRGPADTSDPLQQICKILNAHMDSLQWI
DQNSAVLQRKVEEVTKVCESRRKEQERSFRITFD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttcagcttcgggacgggcgcggcgggcggcggcttcgctctgggcacgccc
agcaccgccgcgaccaccacggccacggccacggccggcttctccttcgcctcgtccgcg
cccgcggcctcggggggcttcagcttcgggagcgcggcgcagacggccgccagcagccag
ccctccgggctgttctccttcagcaggcctgcggcgaccgccgcgcagcccgctggcttc
agcttcgggacgccgggcacgggcagcgcggctccggcagcgagcgtgttccagctgggg
gcaaatgcacccaaattaagcttcggaggcagtgctgctgctccagccacgggaatcaca
gggggctttgcatttggtagctctgcaccgaccagcgcgccctcgagtcaagcagcagct
ccttctggctttgtgtttggatctgctggcacaagcaccacggctcagtccgggacaacg
ggagggtttaccttttccagcagcaccacgactcaggccggagcagccaacgtgagcatc
ggcgctgcagcgccgcagacagcgcccgcggggctgagctttggagcagcacctgcagct
gctgccacctctgctgccaccttgggagctgcaacccagtctgcagcccccttcagcctc
ggggggcagagcacaggcctaaactttgggtcattaacttcaactgcagccactagtgta
cccacggcaacactgaccacaagcaccagctcgggacctgctctgtcctttggggccaaa
cttggagtaacatccactgctgctacaactgcctctaccagcacaacctccgttcttggc
tcaacggggccaactttgtttgcatctgtagcaagttctgcagccccagcatcatctacc
accacaggcctctcacttggtgccccttccactgggacagccagtcttgggacgcttggg
tttgggttaaaagctcctggaacaacaagtgctgccacaacaagcactgccactggcacc
actactgcttctggctttgctttgaatcttaagccattaactacaactggtgccactgga
gctgtgacttctacagctgccatcaccacaacaacaagcaccagtgcacctccggtgatg
acctatgcccagctggagagtttgatcaacaagtggagcctggaactggaagaccaggag
aaacactttctccatcaagctacacaagttaatgcctgggatcagacactgatagagaat
ggagagaagattacttcgttgcacagagaagtagagaaagtgaagcttgatcagaagaga
ctggatcaggaactggacttcatcctgtcccagcagaaggagcttgaagacttgttgacc
cctctggaggagtctgtgaaggagcagagcgggaccatctacttgcaacacgcagatgaa
gaacgggagaggacttacaaactggctgaaaacatagatgctcagttgaagcgcatggct
caagatctgaaggacatcactgagcacttgaatacatcaagaggcccagcagacacgagt
gacccgcttcagcagatctgtaagatcctgaacgcacacatggattcattgcagtggatt
gaccagaactcagccgtgttgcagaggaaggtagaagaggtgacaaaggtctgcgagagc
cgccgcaaggagcaagagcgcagtttccggatcacatttgattga
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