Strigops habroptila (Kakapo): 115612686
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Entry
115612686 CDS
T08851
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115612686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115612686
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115612686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
115612686
NCBI-ProteinID:
XP_030353139
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Position
9:29799161..29809081
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AA seq
574 aa
AA seq
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MSQFSFGTGAAGGGFALGTPSTAATTTATATTGFSFASSAPAASGAFSFGSAAQTAASSQ
PSGLFSFSRPAATAAQPAGFSFGTPGTGSAAPAASVFQLGSNAPTVNFGGSAAAPATGIT
GGFAFGSSAPTSAPSSQAAAPSGFVFGSAGTSTTAQSGTTGGFTFSSSTTTQAGAANVSI
GAAAPQTAPAGLSFGAAPAAAATSAATLGAATQSAAPFSLGGQSTGLNFGLLTSTAATSA
PTATLTTSTSSGPALSFGAKLGVTSTAATTASTSTTSVLGSTGPTLFASVASSAAPASST
TTGLSLGAPSTGTASLGTLGFGLKAPGTTSAATTSTATGTTTASGFALNLKPLTTTGATG
AVTSTAAITTTTSTSAPPVMTYAQLESLINKWSLELEDQEKHFLHQATQVNAWDRMLIEN
GEKISSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLTPLEESVKEQSGTIYLQHADE
ERERTYKLAENIDAQLKRMAQDLKDIIEHLNTSGGPADTSDPLQQICKILNAHMDSLQWI
DQNSAVLQRKVEEVTKICESRRKEQERSFRITFD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttcagctttgggacgggcgcggcgggcggcggcttcgctctgggcacgccc
agcaccgccgcgaccaccacggccacggccacgaccggcttctccttcgcctcgtccgcg
cccgcggcctcgggggccttcagcttcgggagcgcggcgcagacggccgccagcagccag
ccctccgggctgttctccttcagcaggcctgcggcgaccgccgcgcagcccgccggcttc
agcttcgggacgccgggcacgggcagcgcggctccggcagcgagcgtgttccagctggga
tcaaatgcaccaacagtaaacttcggaggcagtgctgctgctccagccacgggaatcaca
gggggctttgcatttggtagctctgcaccgaccagcgcgccctcgagtcaagcagcagct
ccttctggctttgtgtttggatctgctggcacaagcaccacggctcagtccgggacaacg
ggagggtttaccttttccagcagcaccacgactcaggccggagcagccaacgtgagcatc
ggcgctgcagcgccgcagacagcgcccgcggggctgagctttggagcagcacctgcagct
gctgccacctctgctgccaccttgggagctgcaacccagtctgcagcccccttcagcctc
ggggggcagagcacaggcctaaacttcgggttattaacttcaactgcagctactagtgca
cccactgcgacactgaccacaagcaccagctcgggacctgctctatcctttggggccaaa
cttggagtaacatccactgctgctacaactgcctctaccagcacaacctccgttcttggc
tcaacggggccaactttgtttgcatctgtagcaagttctgcagccccagcatcatctacc
accacaggcctctcacttggtgccccttccactgggacagccagtcttgggacgcttggg
tttgggttaaaagctcctggaacgacaagtgctgccacaacaagcactgccactggcacc
actactgcttctggctttgctttgaatcttaagccattaactacaactggtgccactgga
gctgtgacttctacagctgccatcaccacaacaacaagcaccagcgcgcccccagtgatg
acctatgcccagctggagagtttgatcaacaagtggagcctggaactggaagaccaggag
aaacactttctccatcaagctacacaagttaatgcctgggatcggatgctgatagagaat
ggagagaagatttcttcattgcacagagaagtagagaaagtgaagcttgatcagaagaga
ctggatcaggaactggacttcatcctgtcccagcagaaggagcttgaagacttgttgacc
cctctggaggagtctgtgaaggagcagagcgggaccatctacttgcaacacgcagatgaa
gaacgggagaggacttacaaactggctgaaaacatagatgctcagttgaagcgcatggct
caagatctgaaggacatcattgagcacttgaatacgtcaggaggcccagcagacacgagt
gacccgcttcagcagatctgtaagatcctgaacgcacacatggattcattgcagtggatt
gaccagaactcagctgtgttgcagaggaaggtagaagaggtgacaaagatctgcgagagc
cgccgcaaggagcaagagcgcagtttccggatcacatttgattga
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