Strigops habroptila (Kakapo): 115612702
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Entry
115612702 CDS
T08851
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115612702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115612702
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
115612702
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
115612702
NCBI-ProteinID:
XP_030353167
UniProt:
A0A672U1A7
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Position
9:24451448..24476203
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AA seq
562 aa
AA seq
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MATELEPPAAGAVPGAAPLEAEEDEEHWLYGDDTTGKQEDGPISGHTESSHPLQDAPQEN
RPVSNEDREISQHALPSGEDEEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTG
RGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEE
TWKAYCEKQRRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVG
GRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQ
PQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPI
PGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTV
DKGTSSSSSSHWEYSGSRRERERERDRERDRERDRDRTPTTSEYNNDDERYRYYSRERSY
DFERDYRRSRDRSREREDRHRERRHRDKDESSKHKSSRRKQHESEEGESHRRHKHKKNKR
SKEEKETSEDGAQEGEEQDTKE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccgccggcggctggcgccgtgccgggcgcggcgccgctggag
gcggaggaggacgaggagcactggctctacggggatgacaccactggtaagcaagaagat
ggaccaatatctggacacacagagtcttcccatccattgcaagatgctcctcaggagaac
cggcctgtcagcaacgaagaccgggagatctcacaacatgctcttccaagtggtgaagat
gaagaagatgacagcgatagcgacagtgacgatgacgacgtgaaggttactattggcaat
attaaaacgggagcaccatcgtacatgggaactcctatgaatctaaacttaaaaacgggt
agaggctatggagcatctgcttcagccaagttgcagcccaaaggtattgacttagatgct
gcagggaacataaatggattgcctgttatcgaagtggatttagattcatttgaagacaaa
ccatggaggaaaccaggtgctgatctttccgattactttaattatggattcaatgaagaa
acatggaaagcttattgtgaaaagcagcgacggcttcagcttggactggatcctgctcct
cccatcagcactgaaaacaagatcacggttcagcaaggaagaacaggaaatgctgaaaaa
gaagtggaaaacaacatcatcaaaacagaattcaaaacagacttcttggctctggtggga
ggacgcatgaaggctgggcctcctcctaataggaagctgggtgggacgattgatgtgatc
ggtggccaggctggcacaatcaggagagtagaaggaaggcgccgtgataaacatgcctct
gaggaaaacccaatccaggtgcttggagaccacgggagtaagccacaacccccccagcag
ccccaacagccatcacagccccagcagccacctcagcagcagccgttcgcaccaccagca
ggcccaccgcctcctccactggctgggccacctccaccacacttcctccaccctcctcca
ccagttacttctgttccacctcccctgcatcctccaggtctgccaccacccggtcctatt
ccagggttgttcccgcctcctctggcaccaccaccagctctcctcatcccaaccttggat
ggccagccagccagctacaacaacaggcagccacctccattcggctacaactctgcagat
tcaggtttcatcagctacccacccatctccacatcccacacaccctgggtgacgacggtg
gacaagggcacaagcagttccagcagcagccattgggaatactcaggctcaaggcgcgag
agggagcgggagcgggacagggagcgggaccgggagcgggaccgagaccgcaccccgacc
acgagtgaatacaacaacgacgacgagcggtaccgctactacagccgggagcgcagctac
gacttcgagcgcgactaccgccggagccgcgaccgcagcagggagcgggaggaccggcac
cgggagcgccggcaccgcgacaaggacgagagcagcaagcataagtcttccagacggaag
caacacgagagcgaggagggggagagtcaccggcgccacaagcacaaaaagaacaagcgc
agcaaagaggagaaggagaccagtgaggacggtgcccaggagggagaggagcaggacacc
aaggagtga
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