Strigops habroptila (Kakapo): 115612838
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Entry
115612838 CDS
T08851
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115612838 (RLIM)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115612838 (RLIM)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115612838 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
115612838
NCBI-ProteinID:
XP_030353494
UniProt:
A0A672U1K7
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Position
9:complement(24686791..24705177)
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AA seq
618 aa
AA seq
DB search
MAYFITLDKGFVFSFLGTLPLVKMESSDSSDKGNIDQSEAQRQSQLDRLDREEAFYQFVN
NLSEEDYRLMRDNNLLGTPGEITEEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDS
IIDWLNSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENE
PSVEPSTGEDLENSQSDSEIPRSESPSVRQPGSERSTSEELTTEEASPPRGQRRARSRSP
EQRRTRARTDRSRSPINPVSETPRRAHHNTSSQTLDHSSVNEVEGSSRTRQHVTLRQHTV
GTEMPSENAVLFSTPETRPVPQAAGSSETNGTSESATPGQRPPTIVLDLQVRRVRPGEYR
QRDSIANRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGL
SETTSVAIQTMLRQIMTGFGELSYFMYSDSDADPSGPAPNQNVDASEPQNGGSGTSGNES
TDVSSGEVYEGGNEGGSTSGARREGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPR
GLTKEQIDNLAMRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENST
CPICRRAVLASGNRESVV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcatatttcattacactggataaagggtttgttttctcctttttaggtactcttcca
cttgtcaagatggaaagctcagattccagtgataaagggaatatcgatcaatcggaagca
caacgtcagagtcagctggatcggttagatcgagaagaagctttctatcagtttgtaaac
aacctgagtgaagaggactacaggcttatgagagacaacaatttgctaggaacaccaggt
gaaattactgaagaagagttgctgagaaggctacaccaagttaaagaaggtccgccacag
caaaacagtgatgagaatagaggtgcagagtccgcagaagatgtttcaaatggagattct
ataatagactggcttaattcagtccgacagactggaaatacaacacggagtgggcaacga
ggaaaccagtcttggagagcagtgagccggactaacccaaatagtggtgacttcagattc
agcttggaaataaatgtcaaccgtaataatgggaacacaaatccagaaactgagaatgag
ccatctgtagagccttccactggggaggatctggaaaacagccaaagtgactctgaaatt
ccaaggtccgaatcgccatctgtaaggcagcctggatcagaaaggagcacttcagaggag
ctaacaactgaggaagcttcccctcctagaggccagaggagagcaagaagtaggagtcca
gaacagaggagaacacgggctaggactgatagaagtaggtcacctattaatccagtgagt
gagactcctcgcagggctcatcacaatacatcatctcaaacacttgaccactcctcagtg
aatgaagtcgagggaagctctagaactaggcagcatgtgacattaaggcagcatacagtg
gggactgagatgccaagtgaaaacgcagttctgttttcaacccctgaaacaagacctgtg
cctcaagcagcaggttcgtcagaaactaacggtaccagtgagtccgcaactcctgggcag
aggcctcctaccatagtgcttgatcttcaggtgagaagagttcgtccaggagagtatcgg
caaagagacagcatagccaacagaactcggtccaggtcccagacacccaacaacaccgtc
acctacgaaagtgaacggggagggtttaggcgcacgttttcacgttcagaacgggctgga
gtgagaacttatgtcagtaccattaggattccaatccgtaggatcttaaacacaggcttg
agcgagactacatcagttgctattcagactatgctaaggcagataatgacaggcttcgga
gagctgagttactttatgtatagtgatagcgatgcagatcctagtggcccagctccaaac
cagaacgtggatgcttctgagccacagaacggaggtagtggtacttcaggcaatgaaagt
acagatgttagctcaggggaggtatatgaaggtggcaatgaaggtggttcaacatctggt
gccagacgggaaggtcggaatacgaggggctcggtcacatttgaagaaagtggttctcta
ccattccttagcctagcacagtttttccttctaaatgaagatgatgatgaccaaccaaga
ggactcaccaaagaacaaattgacaacctagcaatgaggaattttggtgagagtgatgct
ctgaaaacctgtagtgtgtgtattaccgagtacacggaaggcaacaagctccggaagctg
ccttgttcacacgagtatcacgtccactgcattgatcgctggttatcagagaattccact
tgtcccatttgtcgcagagcagtcttagcttccggtaacagagagagtgttgtctaa
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