Strigops habroptila (Kakapo): 115612862
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Entry
115612862 CDS
T08851
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115612862 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
shab04990
]
115612862 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
shab04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
115612862 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
115612862
NCBI-ProteinID:
XP_030353561
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All DBs
Position
9:complement(15522180..15800902)
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AA seq
1027 aa
AA seq
DB search
MVDSLIVSLRLLSSLAVLGFQFVIPQPSIEHRKVPQRIEEQRDASEDSSAGIPGMWGSWG
PWSACSRSCSGGVMEQTRPCLPAYYRERGYRRPGRQYPASERTLAHENSRHHEDSLTAYP
GHVISAIRTSVPLHRNEEQLWAGLRASASSGGHNNSHLSRGALRGSRHSQSQRQNTKPEK
RSRNRNPIGPGKYGYGKVPYILPLQTDTGQQPQKLRRQRQSSRNHVFHQSPGLMNTYSQG
ASPSLQHGNLYQEENGPQAGHQVLGPSVYQSSSFPVSQSLFHSSDSNHHGSASHQTVQGQ
PQPQRAAAIVCIGTYKQYKLCNTNMCPESSRNIREVQCASYNNKPFMGRFYEWEPFAEVK
GSQKCELNCRAVGYRFYVRQAEKVIDGTPCDQNGTSICVAGQCKSIGCDDYLGSDKVIDK
CGICGGDNTACKVVSGVFKHTLTNLGYHKIVEIPEGATKINITEMSKSNNYLALRSRSGR
SIINGNWAIDRPGRYEGGGTMFIYKRPNEISSTAGESFLADGPTNEVLDVYMIHQQPNPG
IHYEYIIPGDNVISPQLLAHRRPGEPLNGQLGMPESTNHEDEDLHRETDTLTGQPAGTFP
VIQPGRFPSHQPENQVPAVQPPRQNREHNWKQVGKTECTTTCGKGSQYPVFHCVNRITHE
EVSESYCDSSTKPIPEEEACNLFPCPAFWDIGEWSECSKTCGLGMQHRQILCRQMYANRT
LTVQQYRCHHLEKPETTSTCQLKICSEWQIRTEWTSCSVPCGVGQRTRDVKCVSNLGDVV
DDEECNMKLRPNDIENCDMGPCAKSWFLTEWSDRCSAECGDGVRTRSVVCMTNHVSSLPL
EGCGNNRPSETTPCNNGPCAGKVEWFAGGWTQCSTECGSGTQQREVVCVRKTEGNFDVLN
PYECSYLEKPPSQQSCYLKPCGSKWFHTEWSTCSKSCEGGFRVREVRCLSDDMTASTQCD
PQLKPEEKEPCNTQDCIPEIDENCKDKYYNCNVVVQARLCVYTYYKTACCASCTRVANRQ
SGFLGRR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagtttaatagtttctttgagacttctcagttcactagcagtgctgggattt
cagtttgtcatcccacagccttcaattgaacacagaaaggttccccagaggatagaagag
caaagagatgcatctgaggatagcagtgcaggaatcccaggcatgtggggaagttggggc
ccctggtctgcctgctctcggagctgcagtggtggtgtgatggagcagacacggccctgc
ctcccagcctattaccgggaaaggggctaccgaaggccagggcggcagtatccggcctca
gagagaactcttgctcatgagaattcccgccaccacgaggactcgctgactgcttatcct
ggccatgtcatttccgccatccgtacatctgtgccacttcacaggaatgaagagcagctt
tgggctggccttcgggcctctgcttcttctggaggccataataacagccatctgagcaga
ggagcattgagaggcagcaggcattctcagtcccagaggcagaacaccaagccggaaaag
agaagcagaaatagaaatcctattggtccaggaaagtatggatatggaaaagtgccctac
attttacctttacaaactgacactggtcagcagcctcagaaacttcggagacagcgacag
tcgtcaaggaaccacgtatttcatcagagtccaggtctcatgaacacttacagccaggga
gctagtccttcacttcaacatgggaatctttatcaagaagaaaatgggcctcaggctgga
catcaagtgctgggaccctcagtttatcagtcatcttcatttcctgtatctcaaagcctg
tttcacagcagtgactcaaaccatcatgggtctgcatcacaccagacagtccagggtcag
ccccagcctcaaagggctgcagcaattgtgtgcattggcacctacaagcaatataaactc
tgcaacacaaatatgtgtcctgaaagcagcagaaatattagagaggtgcagtgtgcatca
tacaataacaagccatttatgggtcgattttatgaatgggaaccttttgcagaagtgaag
ggaagtcagaagtgtgagctgaattgccgtgcagtaggctaccgattctatgtgagacaa
gctgaaaaggtgatcgatgggacaccctgtgaccagaatggaacttcaatctgtgtggca
gggcagtgcaagagcattggctgtgacgactatctgggttcagacaaggtgattgacaag
tgtggaatatgtggaggggacaacactgcttgcaaggttgtgtctggagttttcaaacac
acgctaacaaatcttggctaccacaagatagtggaaattcctgaaggagctactaaaatc
aacatcactgagatgtcaaagagcaacaactatttggcactgcggagtcgatcaggacgg
tccatcatcaatggaaactgggcaattgatcgacctgggagatacgaaggtggtgggaca
atgttcatttataaacgcccaaatgaaatctccagcactgcaggagagtcgtttttagca
gatggtccaacgaatgaagtccttgatgtctatatgatacatcagcagcctaacccaggg
atacactatgagtatatcattccaggagacaatgtcattagtcctcagttgcttgctcac
aggaggccaggggagcccttgaatggtcagttaggaatgccagaaagcacaaatcatgag
gatgaggatttgcatagggagacagacactctcactggacagccagctggaacttttcca
gttattcagccaggaagatttccctctcatcagccagaaaaccaggtgcctgctgtgcaa
ccaccaagacaaaaccgagaacacaactggaaacaggttggaaaaactgagtgcacaact
acctgtgggaaagggtcacagtacccagttttccactgcgtcaacagaatcactcatgag
gaggtatctgagagttactgtgacagcagtaccaaacccattccagaagaggaagcctgc
aacctcttcccatgtccagctttctgggatataggggagtggtctgagtgcagcaaaaca
tgtggccttggtatgcagcatcgacagatcttatgccggcaaatgtatgccaatcgtacc
ttgacagttcagcaataccgctgtcatcacctggagaaaccagagacaaccagcacttgc
cagctgaagatttgcagtgaatggcagattaggacagagtggacttcatgttcagtgcct
tgtggagtggggcagaggacccgagatgtgaaatgtgtcagcaaccttggagacgtcgtt
gatgatgaggaatgtaacatgaagctgcggccaaatgatattgagaactgtgacatgggt
ccctgtgctaagagctggttccttacagagtggagtgacaggtgttctgcagaatgtggt
gacggagtccgtacgcgttcagtggtttgcatgacgaaccatgtcagcagtttgcctctg
gaaggctgcggcaataacagaccttctgaaacaactccctgtaataatggaccctgtgct
ggtaaagtggagtggtttgctgggggctggacacagtgctctacagaatgtggcagtgga
actcaacagagagaagtcgtttgtgttaggaaaactgaaggtaatttcgatgttttgaac
ccctatgaatgttcatatttggaaaagcctcccagccagcaatcctgctacctcaaacca
tgtggatctaagtggtttcatacagaatggagcacatgttccaaatcctgtgaaggagga
tttcgggttcgagaggtacgatgtctgtcagatgacatgacagccagtactcaatgtgat
ccacagcttaaacctgaagaaaaagaaccatgtaacacacaagattgtatccctgaaata
gatgagaactgcaaagacaaatactacaattgcaatgtggtggttcaggcccggctctgt
gtctacacctattacaaaacagcctgttgtgcatcctgtacacgtgtggcaaacagacaa
tctgggtttctaggacgtagataa
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