Strigops habroptila (Kakapo): 115612917
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Entry
115612917 CDS
T08851
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04080
Neuroactive ligand-receptor interaction
shab04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115612917
04082 Neuroactive ligand signaling
115612917
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115612917
Ion channels [BR:
shab04040
]
Ligand-gated channels
GABA-A
115612917
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF4985
Motif
Other DBs
NCBI-GeneID:
115612917
NCBI-ProteinID:
XP_030353655
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Position
9:complement(29993555..30066644)
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AA seq
473 aa
AA seq
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MALKLPGMGSLSFVSLGVLVLVLALPADAGLSQKHVSDVVDDSKDNITIFTRILDRLLDG
YDNRLRPGLGDSVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMKILP
LNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLED
FPMDVHACPLKFGSYAYTKTEVIYTWTLGKDKSVEVAKGGSRLNQYDLLGHVVGTEMVRS
STGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLT
MTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKVLEA
QEMKKKEPVALAKKTNNTYNIVGTTYALNIAKDPGLPTISKSAGATATATNVPPKMPRTE
EKLPESKKTYNSVSKVDKMSRIVFPVLFAIFNLVYWATYVNRESAIKGMIPKQ
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaagctcccaggaatgggctcgctctcctttgttagccttggagtcctagtt
ctggttttggctctccctgctgatgctgggctttctcagaaacatgtttcagacgtcgtc
gatgacagcaaagacaacatcaccattttcacccggatcctggacaggctgttggatgga
tacgacaaccgcctgagacctggacttggagacagtgtaactgaagtcaagacagacata
tacgtgacgagtttcggccctgtctcagacacagatatggaatacactattgatgtcttt
ttccggcaatcctggagagatgaaaggttgaagtttgatggtcccatgaaaatacttccc
ctgaacaacctgctggccagtaagatctggactcctgacaccttcttccacaacgggaag
aaatctgttgcccataacatgacaacacccaacaagctgctgcgcctggtggacaatggc
accctcctgtacaccatgaggctaacgattcatgcagagtgccccatgcacttggaggac
ttcccaatggatgtgcatgcctgcccgctgaaatttgggagctatgcctacacaaagaca
gaggtgatctacacctggacactggggaaggataaatcagtggaagtagcaaagggtgga
tctcgcctgaaccagtatgacctgctgggccacgttgtggggacggagatggttcgatcc
agcacaggggagtatgtcgtcatgaccacacacttccacctcaaaaggaagatcggctac
tttgtgatccagacctacctaccctgtattatgacggtcatcctgtcccaggtctccttc
tggcttaacagggagtctgtccctgcccgaacggtttttggcgtcaccaccgtcctcacc
atgaccacactaagcatcagcgcaagaaactcgttacctaaagtggcgtatgcgacggcc
atggactggttcatagccgtctgttatgcctttgtgttttctgcgctgatcgaatttgcc
actgttaactacttcaccaagcgcagctgggcttgggatggcaagaaggtgctggaagcc
caagagatgaagaaaaaagagccagtggcactagcgaagaaaaccaacaacacctacaac
attgttggcaccacatatgccctcaacattgcgaaggaccctggcctgcccaccatctcc
aagagtgctggtgccactgctactgccaccaacgtaccccccaagatgccccgcacagag
gagaagctcccagagagtaagaagacatacaacagcgtcagcaaggtagacaagatgtcc
cgcatcgtctttccagtcctctttgccatcttcaacttagtctactgggccacgtacgta
aaccgggagtcagctatcaagggaatgatccccaaacaataa
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