Strigops habroptila (Kakapo): 115612919
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Entry
115612919 CDS
T08851
Symbol
TP53BP1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115612919 (TP53BP1)
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
Tudor_5
BRCT_2
DUF4537
RTT107_BRCT_5
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
115612919
NCBI-ProteinID:
XP_030353663
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Position
9:complement(106272..135468)
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AA seq
1923 aa
AA seq
DB search
MEGGGSQLDPGFSQQDTPRLIVEDSQPEGAGAEEDGEQACLGVLARRLPARRSPSPVLEI
VRGPASSRAPASGGAARERPAEPMESPARQDAARPRGRVAEEVPPPSGERSALGEAGGGG
GDGEECTTSSCVEDTGLSQLQFGALELSQSQDFESDFMPSEGDARHQFRLGATGLVKNDS
TDELPGDSTEALSSTEVCTALEGQPEKSERSVTVSCFSRTLQEAEEHTRKQMPVCDPTKT
EKSLYSGHQELGIFSSQEEMFPENNATGSGCPITRAEEGSSLACTPARSLQLLQLSGQGS
LVQESHSTGFSGLVIPPPVAFGSNALVPSSPTEQEQAKDEQMDISSPAEGREVMQKQRGD
TLAEMAIPHIPPGPLVLPQASTPVSQSAPTFFPGSLPIPSQPEFSHDIFVPTQSPEKKHE
EKAAALTLLCLPEDLSRPTDALSKLSACGTASQPSESCKLMLSASECSQPTDTGVSSGSL
NTSQDSKTTQVEMISECRASDLRLCSLENDDIKLRLDAGDQVLSENCEKANQEDLQTSGK
PVMQLASADVAGYGSLAPTAHQEIECISGSQAAADQACLPEILSYSQGREAQSEDYPLQK
TSEHEAVPETQCEEQEEELQVKEKQIKEDESFLNIPLSQRFILDREVQCHEDTEVEFADS
FCKNSKNLPDKAQELEKIGPESWEKETSKGCTFGTEAAKSMDKLSFETASENMPKLNKVL
SKPSVGELLEQHNNLFPKLKSDVPSEMVVCAKKHPGGSESGQITGNQPLLQERGVDMLVT
QQENQVPENTEDMLMRRNLEQEEQVQPQEKAAAKSHSPSSGSPFHFTLPKEGDVIQPLTS
ITPPLIGQLKMGPRRHSTPIVDDSCPDSTMATSDVTAEGTNSVTVESAVVSTDVSEMCDK
GDSCVVPEADAKLSLRMNLVTPVNDGSEESLPFSLEKPTASDRKNGASAAAGAAASSQKT
SSVFSVVCEVHREDEARGRGLSTSPFRGNLFSFPGMQEDAELQNNPSGWQYQQHKAGDSA
GQVQIPQRMQQDCHQQPSNAEGGESVETGIESTEREEERRMQKKPSKAVKIDESQERWAN
TRNKGIQTTADCLVTPTTVTAATQTSEEICRQVEVGTSMSGQRPGRQDANVQTEESGEKI
LNASGEDMDSLHSQVGEEEFNLLHPPKGRVQHRHMRTIREVRTVVTRVITDVYYINGAEV
ERKVVEETEEPVVECQECETDASSSRTAAGSSLTSGDLGDVSSFSSKASSLHRTSSGASS
GHSATHSSSSSSGRGAGAVKGKACGTGTGEFALPIGRGVLGKLSPRKGAGQPASSLRVSQ
TGALPCEEEEESLPGTRQGGKAPMTPRGRGRRGRPPSRTTGTRDLAGLPGTEDLSTTASP
EDKSFTRSVRLPDGGEKPNTSGFCALRRSDSPEIPLQVVTGPSDCADSSSGSSFVGLRVV
AKWSSNGYFYSGMITQDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLETEVTALSEDEY
FSAGVVKGHRKESGELYYCIEKEGQRKWYKRMAVILSLEQGNKLREQFGLGPYEPVTPLT
KAADISLDNLVEGKRKRRSNLGSPSISSSSTTPTRKGQESPRIPPGTLSGKRKLVASEDE
RSPAKRGRKSAVIKLGAVRTGESVSTCERVDAVDLPVLEDHHGPLPHNKTLFLGYAFLLT
MATPSDKLVNHQKPSDGPAGSSEEEEEFLEMTPYDKHYVAQQLRAGAGYILEDFNETQCN
AAYQCLLIADQHCRTRKYLLCLARGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLQEQ
KLLEWHPRENPFHNLKVLLVSDQQQNFLDLWSEILMTGGAASVKQHYSNAHNKDPCLSSC
ADIPLGVYDVVVTDFSCPAGVLKCAEALQLPVVSQEWVIQSLIAGERVGYKKHPKYKHDY
ASH
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtggcggcagccagctggatcccggcttctcgcagcaggacacgccccgccta
atcgtggaggattcgcagcccgagggcgcgggcgcagaggaggacggggagcaggcctgc
ctcggtgtgcttgctcggcggctgccggcccggcggagcccgagccccgtgctggagatc
gtccgcggtcctgccagcagccgggcacctgcgagtggcggggcggcccgggagcggccc
gcagagccaatggagagccctgcccgccaggacgccgcccgaccgcggggccgcgtcgct
gaggaagtgccgccgcccagcggggagcgcagtgcccttggagaggctggaggaggtgga
ggtgatggtgaggaatgtactacttcgtcgtgtgtagaagacacaggcttgtcacagctg
cagtttggagctctagagctctcacagagccaggactttgagagtgacttcatgcccagt
gaaggagatgctaggcatcagtttcgccttggagctactggactcgtgaagaacgatagt
acggatgaactgcctggggacagcacggaagctctctccagcacagaagtgtgtactgct
ttggaaggccagccagagaagtctgaaaggtcagtgactgtgtcttgcttttccagaact
ctgcaggaagcagaagaacataccaggaaacaaatgcctgtctgtgaccccactaaaact
gagaaatccctctattctggtcaccaggagttgggtatcttttcaagtcaggaagagatg
tttcctgagaataacgcaacagggagtggctgcccgataaccagggcggaagagggaagt
tccctggcgtgcacccctgcccgcagtctgcaacttctgcagctctctggacagggttcc
cttgtacaggagagtcattccactggcttttcaggtctcgttattcctcctcctgttgcc
tttggatccaatgctcttgtccctagcagtcctactgaacaggagcaagcaaaagatgaa
cagatggatatatctagccctgcagaaggaagagaggtgatgcagaagcagagaggagat
acgctagcagagatggccatcccacatataccaccaggacctcttgtcctgccacaggct
tcaactccggtgtcccagagtgccccaaccttttttccaggatctttacccataccatca
caaccagagttctctcatgatatctttgttccaactcagagcccagagaagaagcatgaa
gaaaaagctgctgctttaacccttttatgcttaccagaagatctctctcgacccacagat
gctttgtcaaagctgtctgcatgtggcactgcgtctcagccttctgagtcctgtaagctg
atgctttctgcaagtgaatgtagccagcccacagatacaggtgttagttcaggttctctt
aacaccagccaagacagcaaaaccacacaggtagagatgatttctgaatgcagggcctca
gacttgagactctgttctttggagaatgatgatataaaactgaggctggatgcaggtgat
caggtcctctctgaaaattgtgaaaaggcaaaccaggaggatttacagacctcgggaaag
cctgtaatgcagttagctagtgcagatgtagcaggatatgggtcattagcccctacagct
catcaggagattgagtgtatttctggaagtcaggctgctgcagatcaggcttgtctgcct
gagattttgtcatacagtcagggtagagaagcacagtctgaggattatccactgcaaaag
acttctgaacatgaggcagttcctgagactcaatgtgaagaacaagaagaagaactgcaa
gtaaaagagaaacaaataaaagaagatgagtcctttcttaatataccgctttctcagagg
tttattcttgacagggaagtacagtgtcatgaagatacggaagtggaatttgctgatagt
ttttgtaaaaatagcaaaaatttgcctgataaggcccaagaattagaaaagattggacca
gaaagctgggaaaaagaaacttcaaaaggttgcacttttggcactgaagcggcaaagagc
atggataaattgtccttcgagactgcttcagaaaacatgccaaagctcaataaagtttta
tctaagccttctgtaggggagttactggaacagcacaacaatttgtttcctaagttaaag
agtgatgttccatcagaaatggtggtgtgtgccaagaaacatccaggtggttcagaatca
ggacagataacggggaatcagccactacttcaggagagaggggttgacatgctggtgact
cagcaggagaatcaggtgccagagaacacagaggacatgcttatgagaaggaatctggag
caagaagagcaggtgcagccacaagagaaggcagctgctaaatcccacagtccttccagt
ggaagtccatttcattttactttgccaaaggagggtgatgtcattcagcccttgaccagc
ataacgccaccgcttattggccagcttaaaatgggacccagaagacacagcacaccaatt
gtggatgatagttgcccagacagcactatggcaactagtgatgttacagcagaggggacc
aacagtgtcactgtggaaagtgcagtggtatcaacagatgtgtcagaaatgtgcgacaaa
ggagattcttgtgtggttcctgaggctgatgcaaaactctcactccgaatgaaccttgtt
acgcctgtgaatgatgggagcgaggagtccctgccattcagcttggaaaagcctacagca
agtgacaggaaaaatggagcctctgctgctgctggggctgctgccagctcccagaaaaca
tcatctgtgtttagtgttgtctgtgaagttcatcgagaggatgaggccagaggtcgtggt
ctttccacttctccatttagggggaatctgttcagttttcctggcatgcaagaagatgct
gaattacaaaacaatccaagtggttggcagtaccagcaacacaaagcaggtgacagtgct
ggacaggtccaaattcctcagaggatgcagcaggactgccatcaacagccttctaatgca
gagggtggagaatctgtggagactggtattgaaagcactgagagagaagaagagaggagg
atgcagaagaaaccaagtaaggctgttaaaattgatgaaagccaagagaggtgggcaaac
accaggaataaagggattcagactacagcagactgtcttgttaccccaacaactgttaca
gcagcaacacagacatcagaagaaatctgtaggcaggtggaagtgggaaccagtatgtct
gggcaaagacctgggcgacaagatgcaaatgtccaaactgaggagagtggggaaaagatt
ctgaatgcctctggagaggacatggactctctgcacagtcaggtgggagaggaggagttt
aatcttcttcatccgcccaaaggccgagtgcagcatcgccacatgcgaactattcgagaa
gtacgcactgttgttacgcgggttataactgatgtttactacataaatggtgcagaggtg
gaacgaaaggtagttgaggaaactgaagagcctgtagtggagtgccaggagtgtgagact
gatgcatcctcctctagaactgcagcgggctcatcactgacctcaggggaccttggtgat
gtcagctccttctcatccaaggcctcaagcctccaccgtacatccagtggagcaagcagt
ggtcactctgccacacacagcagcagtagcagctcagggcgaggagctggagctgtcaaa
gggaaagcgtgtgggacaggaactggagagttcgctttacccattggcaggggcgtctta
ggaaaattaagccctaggaaaggagctggtcagccagcatcttcactcagagttagccag
acaggagcactgccttgtgaggaagaggaagaatctttgcctggcactcgtcagggtggc
aaagcacccatgacacctcgcgggcgaggaagaagaggccgcccaccatctcgaacaaca
ggaacaagagatttagctggactgccaggtacggaggatctctcaactacagcatcgcct
gaggacaaatcatttactcgttcagttcgcctgccagatggaggggagaaacccaacact
tctggcttctgtgccttacgtcgaagtgactctccagaaatcccattacaggtggtgact
ggtccttcggactgcgcggactcatcttctggaagcagctttgtgggcctcagggtggta
gcaaagtggtcctcaaatgggtacttctattctgggatgattacccaagatgttggagca
ggaaagtacaagctgctctttgatgatggatatgaatgtgatgtgctaggaaaagatatt
ttactctgtgatcctatcccactggagactgaggtgactgcattgtcagaggatgagtac
tttagtgcaggtgtggtgaagggacatcgtaaggagtctggagagctatactattgcatt
gaaaaggaaggccagagaaagtggtacaaacgaatggctgttatcctgtctctggaacaa
ggaaataagctacgggagcaatttggactaggaccttatgaacctgtcacccccctgacc
aaagcagctgacatcagtctcgataatcttgtggaggggaagcggaagcgtcgtagtaac
cttggttctcccagcatttccagcagcagcacaactcccactcgtaaagggcaggagagc
ccacgcatcccaccaggcacactgtctgggaaaaggaaacttgttgcttctgaagatgag
agatccccagctaaacgtggccgcaagtcagcagtgataaagcttggggctgtgagaact
ggagaatctgtaagcacctgtgaacgtgtagatgctgtagatcttccagtactggaggac
catcacggacccttgccccataataagactctctttttgggctatgcctttctcctcacc
atggcaacacccagtgacaaattggtcaatcaccagaagccatcagatggtcctgcaggg
agtagtgaggaggaagaagagtttttagagatgactccatatgacaaacattacgtagca
cagcagctgagagcgggagctggttatattctggaagacttcaatgaaacccagtgcaac
gcagcgtatcagtgtcttttaattgcggatcagcattgccgaactaggaaatacttgctg
tgccttgccagagggatcccttgtgtgtctcatgtctgggtccatgacagctgtcatgct
aaccagcttcagaattaccggaattaccttttgccagctggttatagcctccaggagcaa
aaattgctggaatggcatccacgagaaaacccattccataacctgaaggttctcctggtg
tcggaccagcagcagaacttcctggatctgtggtctgaaatcctcatgacagggggagca
gcatctgttaaacagcattactcaaatgctcacaacaaagatccctgtctttcttcctgt
gcagatattcctttgggtgtttatgatgtggtggtgactgatttttcctgcccagctggt
gtcctgaagtgtgctgaagctttacagctgcctgttgtctcccaagagtgggtgatccaa
agccttattgctggggagagagtaggctacaagaagcatccaaaatataaacatgactat
gcctcccactaa
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