Strigops habroptila (Kakapo): 115613042
Help
Entry
115613042 CDS
T08851
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shab02000
]
115613042 (TMC3)
03037 Cilium and associated proteins [BR:
shab03037
]
115613042 (TMC3)
Transporters [BR:
shab02000
]
Other transporters
Pores ion channels [TC:
1
]
115613042 (TMC3)
Cilium and associated proteins [BR:
shab03037
]
Other cilia and associated proteins
Stereociliary proteins
115613042 (TMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
START
Motif
Other DBs
NCBI-GeneID:
115613042
NCBI-ProteinID:
XP_030353922
LinkDB
All DBs
Position
9:complement(9346583..9375501)
Genome browser
AA seq
1358 aa
AA seq
DB search
MAAATGSAAVKTAKSCKKYRTVKRHAGIYTYQEPPHSNSDEDISEEKAESHDPEQIFQNI
QYQKEIMSNIRCRPWPMRQKLRALRQAKEIVLKYEGRLTRTRGYQAAGAELWRKFIRLAY
NFVVIFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLAGAAF
GTTDRKTIPEEHVASAQDLDTIWSLGGYLQYSVLFYGYYGRDRKIGKAGYRLPLAYFLVG
MAVFAYSFIILLKKMAKNSRMSLASASDENYTFCWRLFCAWDYLIGNPEAAESKAAAIVN
SIREAILEEQEKKKSKNLAVTISLRIIANILVLLSLAGSIYIIYFVVDRSQKLERTKKEL
TLWEKNEVSVVVSLITMIAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIAL
LDKVDSMSVTDSDVNHNATNFATFSTTKTPSKEDNLSTTIPDVRSKRNGIVILEESRAQG
MTVSDSLVNRTVSLNSNTQNPQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLCV
RYLSDCWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMY
LRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIARYKPSLSCGPFSGQ
EKIYDIVSETIKSDFPTWFNTVITYISSPVVVLPALLLLFMLIYYLQSIARSLKFTNNQL
RMKIQTERTEDKKKVVQMAVARIQNLDGNDKRPEPETDIISQESSVRSSTPRKNGSVLNF
ESPVTKGTRIQTISQSVPQTVPSTDVARPINATPTTSTSLTPAPSASSVQKPRNDHITNR
YPSIVHRSASELCKTKPYTPVTFKKHTEDVHSEPLFRKGIRQVNPDALGAGAPVFLGCRP
YATRYFVVNENETRKKSLRSTSRLQRHFRKEEPGGIIELYPRNIRRYVVRTPHQMYSPHP
SEDEEDEEELGREFMNRSHRPRSLSDLRPAPRFYIGEHGDGHILMSKDLARVHYKSWDDG
FELDLDRPPYAYKKVHLNYPEPRVKPKSKQKLEQSLTESDSISIESSSDPQNSGNDQYIQ
VIHSKEKYAKPGSKLNKKKTKNSVDLNMSEPNELVCSNVCGAAAIGPRGRCARSPHRRQP
SGSSALPAMDYAELAVAAAEKMELYRQDPGGWRGCRRTSEVSVSWRPSAEFAGNVYRGEG
ILPASPLDVWECIKPVAGGLRTKWDQNVKDFEVIEAINDAVSVCRTTTSSAFMRVISPRE
FVDVVLMKQFEDGTMLSAATNVEHPLCPPRPNFVRGLNYPCGCFCIPLPGEPDRTQLLSF
FQTDLGGYLPQTVVDSFFPASIAGFYSNLTKAVKQLKA
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcgacgggctctgctgcagtgaaaactgccaagtcctgcaagaagtatcgc
acagtgaagcggcacgctggcatctacacctaccaggagccaccccacagcaactcagat
gaagatatcagtgaagaaaaggctgagagccatgatccagagcagatcttccagaatatc
cagtaccagaaggagattatgtccaatatccgctgccgaccatggccgatgaggcagaag
ctgagagcactcagacaggcgaaggagattgtgctgaagtatgaagggaggctcactaga
acaagaggttaccaggctgctggggcagagctttggaggaagtttattcgacttgcatat
aattttgtggtcatctttattccttgggaaatgagaataaagaagatagagagtcatttt
gggtctggagttgcctcttacttcatcttcttgagatggctgtttggaatcaatattgta
cttactataatgacaggagcatttgtagtcttaccagagctactggccggggcagcgttt
ggcaccacagacagaaagaccattcctgaggagcatgttgcatctgctcaagacctggac
accatctggtcactagggggctacctccagtactctgttttgttttatggctactacggt
cgtgacaggaagattgggaaagctggatatcgtctgcctcttgcctacttccttgttgga
atggcagtgtttgcttacagcttcatcattctcttaaaaaaaatggcaaaaaactcaaga
atgagtttagcaagtgcctctgatgaaaattacactttctgttggagactgttctgtgct
tgggactacttaataggaaaccccgaggctgcagagagcaaagctgctgccatagttaat
agcattagggaagccatactggaagagcaggaaaagaagaaaagcaaaaacttggcagtg
actataagcttaagaattattgcaaacatcctcgtgctcctctcgcttgctggaagtatt
tacattatatactttgtcgtggatcgatcccaaaagttagagcgcactaaaaaggaattg
actctttgggaaaaaaatgaggtaagcgtagttgtgtcactgattacaatgattgcaccc
tctgcttttgagcttgtggcagctttagagatgtaccatccaaggaccactcttcgcttc
cagcttgccagggttcttgttctatacctgggaaacctctacagtttaatcattgctctc
ctggataaagtggacagtatgagtgtcactgactctgacgttaaccacaatgcaactaac
tttgccaccttttcaacaactaaaacgccttctaaagaagacaatttatctacaactatt
cccgatgtgcgcagtaagagaaatggcattgtcatactggaagagagtcgtgctcaaggc
atgacagtctctgactcactagttaacagaacagtctccttgaactctaacacccagaac
ccacaagatcagtgctgggagacctatgttggtcaagagatgctaaagctttcaattatc
gacatgattttcacagtcgcaagcatcctgctaattgattttttccgtggactgtgtgtc
cgatatttaagtgattgttggtgctgggatctagaaagcaagtttccagaatatggagaa
ttcaaaattgcagagaatgtattgcatttagtctacaaccaaggaatgatctggatggga
gctttcttttcaccttgcttaccagcattcaatgtcctcaagttgattggactcatgtac
ctgaggagctgggctgtgttaacgtgtaatgtaccacatcagcaggttttcagagcatct
cgatccaataatttctacttggccatgttgctgttcatgttgttcttatgcatgttacca
acaatttttgctattgcccgatataagccatctttaagctgtggtcccttcagtggacaa
gaaaaaatatatgatatcgtttctgaaacaattaaaagtgattttcccacatggtttaac
acggtgattacttacatcagcagtcccgtggttgttctccctgcactattactattattc
atgctgatctattacttacaaagtattgcaagatcattaaaattcaccaacaatcaactc
agaatgaagatccaaacagaaagaactgaagataagaaaaaggtggttcagatggcagta
gccagaatacaaaatctggatgggaatgacaagaggccagagccagaaactgatattatc
agccaggagtcttctgttcggtcctcaactcctcgaaagaatggcagtgtcctgaacttt
gaatctcctgtgaccaaaggcaccagaatacaaaccatttcccagtccgtgccccaaact
gtgccctcaactgatgttgcaagacccatcaacgcaactcccacaacttcaacctcttta
acgccagctccctcagcatcaagtgtacagaaaccaagaaatgatcatatcacaaacagg
tacccaagcattgtgcataggagtgcaagtgagctctgtaaaacaaagccctatacaccg
gtgacattcaaaaagcacactgaagatgttcattctgagcctctcttcagaaaagggatc
cggcaggtaaatccggatgcccttggggcaggagctcctgtttttctgggatgtagacca
tatgctaccaggtattttgttgttaatgaaaatgagacccgcaagaaatcgctccgttct
acctcccgactccaaaggcacttcaggaaggaggaaccaggtggtattattgagttgtat
ccacgcaacatcaggagatacgtggttcgaacaccacaccagatgtattcccctcatccc
agtgaagatgaggaggatgaagaggaacttggtagagaattcatgaacagatcccaccgc
cctcgctcactgtctgatcttcgcccagcaccacggttttacattggggaacacggtgat
ggccacattcttatgagcaaagatctagccagagtgcattacaaatcctgggatgacggt
tttgagctagacctggacaggcctccatatgcttacaagaaagtgcacctgaactatcct
gagcctcgtgtgaaaccaaaatcaaagcaaaagctggagcaatcactaacagagtctgat
tccatttccattgaatccagcagtgatccgcagaacagtggcaatgaccagtacattcag
gtcattcatagcaaggaaaagtatgcgaaacctgggtcaaaactcaacaaaaagaaaaca
aaaaacagtgttgatctaaatatgtctgagcctaacgagctggtctgctcaaatgtctgc
ggcgccgccgccatcggcccacgggggcggtgcgcacggagccctcataggcggcagccg
agcggtagctccgccctcccggccatggactacgcggagctcgccgtggcggcggccgag
aagatggagctgtaccggcaggatcccggtggctggcggggctgccggcgcacaagcgag
gtttcggtgtcatggagaccctccgcggagtttgccggcaacgtgtacaggggcgagggg
atcctgcctgccagtcccctggatgtctgggagtgtataaagccggtggccggagggctc
aggaccaagtgggaccaaaacgtgaaggactttgaggtcatcgaagccatcaatgatgct
gtctctgtatgcagaaccacaacctcttcagctttcatgagggttatttcaccaagagaa
tttgtggatgtggtactgatgaagcaatttgaagatgggacgatgctatctgctgcaacc
aatgtggaacacccgctgtgtcctcctagaccaaattttgtgagaggtttgaattatccc
tgtggctgtttctgtatacctcttccaggggaaccagacaggactcaactcctcagtttc
tttcagactgatcttggtggctatcttccccaaacggtggtggattccttctttccagct
agcatagctggtttttacagtaacctgaccaaagctgttaagcaattaaaagcatga
DBGET
integrated database retrieval system
