KEGG   Strigops habroptila (Kakapo): 115613054
Entry
115613054         CDS       T08851                                 
Name
(RefSeq) caltractin-like
  KO
K10840  centrin-2
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    115613054
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shab03019]
    115613054
   03036 Chromosome and associated proteins [BR:shab03036]
    115613054
   03400 DNA repair and recombination proteins [BR:shab03400]
    115613054
Messenger RNA biogenesis [BR:shab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     115613054
Chromosome and associated proteins [BR:shab03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    115613054
   Centrosome duplication proteins
    Centriole replication proteins
     115613054
DNA repair and recombination proteins [BR:shab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      115613054
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EH SRI EF_EFCAB10_C EF-hand_5 EF-hand_14 DUF7645 LETM1_RBD DUF7390 SUB1_ProdP9 DUF445 FCaBP_EF-hand DUF5693 SurA_N_3 SurA_N_2 DUF6955 Formyl_trans_N MgtE_N
Other DBs
NCBI-GeneID: 115613054
NCBI-ProteinID: XP_030353937
LinkDB
Position
9:23590655..23594161
AA seq 190 aa
MRKRSCRDRSRRGAAAAGMASSLPKPSQGGASRERKASPKLELTEEQKRDIREAFDLFDT
GGTGNMDVKELKVAMRALGYEPRREEIKKMVLDIDKEGTGKISFSGFMRVITQKMVEKDS
KEEILKVFKLFDDDETGKISFKNLKRVARELGENLTDEELQEMIDEADRDRDGQVNEQEF
LHIMSKTSLY
NT seq 573 nt   +upstreamnt  +downstreamnt
atgagaaagcgcagctgccgtgaccggagccgccgcggggcagcggccgccgggatggcc
tccagcttgccgaagccctctcagggaggcgcgtcccgggagaggaaagcgagccccaag
ctggagctcaccgaggagcagaagcgggatatccgcgaggctttcgacctgtttgacacg
ggcggcaccgggaacatggatgttaaggagctaaaggtggccatgagagcgcttgggtat
gaacctagaagagaagagatcaagaaaatggtattggatatcgataaggaaggaacagga
aagatcagcttcagtggcttcatgagagtgataacacagaaaatggttgaaaaagattcc
aaagaggagattctcaaagtcttcaaacttttcgatgacgatgaaactggcaaaatctct
ttcaaaaacctcaaacgtgtcgccagagaactgggggagaatctcacggatgaggagctg
caggaaatgattgatgaagcggacagagacagggatgggcaagtgaacgagcaggaattc
ctgcacatcatgagcaagaccagcctttactga

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