Strigops habroptila (Kakapo): 115613054
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Entry
115613054 CDS
T08851
Name
(RefSeq) caltractin-like
KO
K10840
centrin-2
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
115613054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115613054
03036 Chromosome and associated proteins [BR:
shab03036
]
115613054
03400 DNA repair and recombination proteins [BR:
shab03400
]
115613054
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
115613054
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
115613054
Centrosome duplication proteins
Centriole replication proteins
115613054
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
115613054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
AIF-1
EH
SRI
EF_EFCAB10_C
EF-hand_5
EF-hand_14
DUF7645
LETM1_RBD
DUF7390
SUB1_ProdP9
DUF445
FCaBP_EF-hand
DUF5693
SurA_N_3
SurA_N_2
DUF6955
Formyl_trans_N
MgtE_N
Motif
Other DBs
NCBI-GeneID:
115613054
NCBI-ProteinID:
XP_030353937
LinkDB
All DBs
Position
9:23590655..23594161
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AA seq
190 aa
AA seq
DB search
MRKRSCRDRSRRGAAAAGMASSLPKPSQGGASRERKASPKLELTEEQKRDIREAFDLFDT
GGTGNMDVKELKVAMRALGYEPRREEIKKMVLDIDKEGTGKISFSGFMRVITQKMVEKDS
KEEILKVFKLFDDDETGKISFKNLKRVARELGENLTDEELQEMIDEADRDRDGQVNEQEF
LHIMSKTSLY
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagcgcagctgccgtgaccggagccgccgcggggcagcggccgccgggatggcc
tccagcttgccgaagccctctcagggaggcgcgtcccgggagaggaaagcgagccccaag
ctggagctcaccgaggagcagaagcgggatatccgcgaggctttcgacctgtttgacacg
ggcggcaccgggaacatggatgttaaggagctaaaggtggccatgagagcgcttgggtat
gaacctagaagagaagagatcaagaaaatggtattggatatcgataaggaaggaacagga
aagatcagcttcagtggcttcatgagagtgataacacagaaaatggttgaaaaagattcc
aaagaggagattctcaaagtcttcaaacttttcgatgacgatgaaactggcaaaatctct
ttcaaaaacctcaaacgtgtcgccagagaactgggggagaatctcacggatgaggagctg
caggaaatgattgatgaagcggacagagacagggatgggcaagtgaacgagcaggaattc
ctgcacatcatgagcaagaccagcctttactga
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