Strigops habroptila (Kakapo): 115613214
Help
Entry
115613214 CDS
T08851
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115613214 (DENND4A)
Membrane trafficking [BR:
shab04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115613214 (DENND4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_long
PPR_3
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
115613214
NCBI-ProteinID:
XP_030354234
LinkDB
All DBs
Position
9:2637340..2689111
Genome browser
AA seq
1893 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDISKPLEEEIHFNDACHKIAKPKEPITDVTVLNKSLGEEVPQ
GYKCIDVTPSGLSADLNNGSLVGPQMYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQ
TTPYGRPANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDK
NLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLSEKQKSQLGLAAAAEGK
SDTCRTVQTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPS
PQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILI
HSLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGIDSRYFDLYDP
PPDVSCVDLDTNTISQTGDKKTIAWKILPKKPCKNLMNTLSNLYQQLAELQQRPREDALM
ELAMNDYDFNSGKKLHLLDLEIQEAFLCFMASILKGYRSYLRPITEAPSETATDASSLFE
LQGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKTGET
RLIELDESYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLDLFERPEGFLKAPNN
KLSSKASSPNSPSPMFRRTKQEIKSAHKIAKKYSSIPQMWSRCLLRHCYGLWFICLPAYV
KVCHSKVRALKTAYDVLQKMHTKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMQKAG
VDPNAITYGYYNKAVLESTWPSSNRGGYFLWMKVRNVVLGIAQFKKALKKLPANTSHTAT
PGGLSDSGNNTSFKEEAKQGKTCLQDIQEQKEDKRESDSSSLSEVESTKGSGDCLPKLNY
QNSSNAKTASSIVRLNGTVDNTIAEASTESSVGLLFTSSFEDASEAEVIKSKSLRKRHKS
AVEPDLREIPWESRNRNLSGDGLVGLMMNRINQETNPGEMVEKLGADAKILSSALQKSIR
PKTLNIRSSSLGSKRESLEKESSDEDATFDCSFTDKTESPVIFDLEDLDAEPETATAVKP
SSEKSKRLQRKSSFPVKPVEKTDVETGFDPLSLLVAETEQQKEEEEEDDDRSVSTPSARR
DLAEEIVMYMNNMSSPLSSRAPSIELQKPFDDRNANKKSPTIIQPCRRSSLPPNSPRPSS
LIKSKSYHARNEERTRDRLWSSPAYSPNSPAKEQPQDATSALTLVSSPSFNLDTLLTPKF
DVLKSSMFSAGKGVAEKASKWYSKFTMYAASSKDQNSDRASVSSLGALDSESTSLTDEDV
CNDFESASPQENTTSEIKGIGLSRTSLESSASHDGSSKQFDQCGSLSKFPLPDKSELISS
CSTSSTSVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFLP
FLSIEIRDLRRPGRFFFPCSYFLKSSPSTENMQYPSIFSNQSGKSCNTAATVGLATSLMS
VQEDINSNSKSKQHENSCARSIQIPSGRRQNTSGSECTSHPVARSISTFGPLEEDEKENQ
KISHIIPTGSLPATLQGPTDSLGLEWRLPSPDPITVPYLSPLVVWKELESLLENEGDHAI
TVADFVDHHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRSCMSEDSKYVLIQ
MLWDNMKLHQDPRQPLYILWNAQSQNRTLLFETQKYPMVHLLQKDDDSFNQELLRSMVKS
IKMNDVYGPMSQILERLNKWPHMKRQRSLYREILFLSLVALGRDNIDIDAFDREYKMAYD
RLTASQVKNTHNCDRPPSTGVMECRKIFGEPYL
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggggctcgtgttgctgactacttcgttgtcgcaggactaacagatatt
tccaaaccactagaggaagaaatccacttcaatgatgcttgccataaaatcgctaaacca
aaagaacctattacagatgtaacagtacttaataaatctctgggggaggaagttcctcag
ggatataaatgtatagatgttactccctcaggactgtctgcagatctcaataatggcagt
cttgtaggaccgcaaatgtacctttgttatcgccgaggaagggataagcccccgcttact
gatttgggggttttatatgatgggaaagaaagagtaaagcaaggttgtgaaataattcaa
accactccctatggtcggcctgctaacatcagtggcagtgcctcatcacagcgagtgtac
atcacttaccgaagagcatccgaaaacatgacacagaacacgctggctgttacagatata
tgtataatcataccaagtaaaggagaaacccctccacacacattctgcaaggttgacaag
aatcttaataatagcatgtggggctcagcagtgtatttatgttataaaaagtctgtggca
aaaaccaacaccatatcatataaagctggattaatatgtagatatcccgaagaagattat
gaatcattcccattaccagagtctgtgcctcttttttgtctacctatgggtgcaacgatt
gaatgttggccatctaacagtaaataccctctcccagttttttctacatttgtactaact
ggagcttctgcagaaaaggtatatggtgctgctattcagttttatgaactgtatcctgaa
gagaatctctcagagaaacaaaaatctcagctgggattagcagctgctgctgagggaaag
tcagacacatgcagaacagttcaaacaaataaatgcatctgtctgctctctcactggcct
ttctttgatgctttcaagaagtttcttacctttctgtatcgctactccatctctggtcca
cacgtcctacccattgaaaaacacatttcccatttcatgcataaagttccctttccatcc
ccacagaggccaagaattctagttcagctatctccacacgataatctgattcttagccaa
cctgtgtcatcaccccttccactgagtgggggcaagttttctacactacttcagaattta
ggacctgaaaatgcagtaactctacttgtgtttgctgtgacggaacataaaattctcatc
cattcgttacgaccttctgtccttactagtgtgacagaggcattagtctctatgatattt
cccttccactggccttgcccgtatattcctctctgtcccttggcactggcagatgtgtta
agtgcaccatgccctttcatagtgggaattgattcaagatactttgatctctatgaccct
ccaccagacgttagctgtgttgacctagataccaatacaatttctcaaactggagataag
aaaactattgcatggaagatcttaccaaagaaaccttgtaaaaatctgatgaacacttta
agtaatttatatcagcaactggcagaattgcaacagcggccaagagaagatgcattaatg
gaattagcaatgaatgactacgattttaattctgggaagaaattgcatctgttagatttg
gagatccaggaagcatttctatgtttcatggcctcaatactaaaaggttacaggtcttac
ctcaggccaataacagaggcaccctctgaaacagccacagatgcaagttctctctttgaa
ctacaaggtttcctcaaaagtcgagatcgttcacatcagaagttctacacgctgatgacc
aaaactcagatgtttattcgcttcattgaagaatgttcttttgtcagtgataaggatgca
agccttgctttttttgatgactgtgtagataaagtagatatggacaaaactggggaaaca
cgacttatagagctggatgagtcatacaaaagtgagcatacagttttcataacaccacct
gagatcccccatctgccaaatggtgaagagcaccctctacaatacagctataatggattt
ccagtgttaaaactagatttgtttgagcgaccagaaggatttctcaaagcaccaaataac
aaactgtcctcaaaagccagtagtcccaacagcccatcgccaatgttcagaagaactaaa
caggaaattaaatcagcacataaaattgctaagaagtactcatccataccacagatgtgg
tccaggtgtttgctgcgtcactgctacggtctttggtttatctgcctccctgcgtacgtg
aaagtgtgccattcaaaagtcagggctctgaaaactgcttatgatgtgctgcaaaaaatg
cataccaaaaaaatagatccacctgatgaggtgtgctaccgagtactcatgcaactgtgt
ggacagtatgggcagcctgtgctagcagtgcgagtgctgtttgaaatgcagaaagctggt
gttgaccctaatgccattacttatggctactacaataaggctgttctggaaagcacctgg
ccttcaagcaatcgaggtggctatttcctgtggatgaaagtacgaaatgttgttttagga
atagcacagtttaaaaaagcattgaaaaagctaccagcaaacacatcccatacagccact
cctggagggctttcagactctggcaataacacatcattcaaagaagaagccaagcaaggg
aaaacttgtcttcaagatatacaagaacaaaaggaggacaagagagagagtgactccagt
tctttgtccgaagtagagagcacaaaagggagtggcgactgcctgcctaaactaaattac
cagaactcaagcaatgccaaaaccgcttccagcatagtgcggctcaacggtacagttgac
aataccatagcagaagccagcacagagagttctgtaggattgctgtttacatcatctttt
gaggatgccagtgaagcagaagttataaaaagtaaatccttaagaaagagacataaaagc
gcggtagaacccgacttaagggagataccatgggaaagcaggaaccgtaacctgagtgga
gatggcttagtaggactcatgatgaatagaataaatcaggaaacaaaccctggagaaatg
gttgaaaaactaggagctgatgccaaaatcctatctagtgcattacagaaaagcataagg
ccaaaaactcttaatattagaagttcttctttaggatctaagagagaaagcctggagaaa
gaatctagtgatgaagatgcaacttttgattgcagttttacagataaaacagagtctcct
gttatctttgatttggaagacttggatgcagaacctgaaacagctacagcagtgaaaccc
tccagtgaaaaatccaaaaggctgcaaagaaagagcagctttccagtaaagccagttgaa
aagacagatgttgaaactggatttgatccgctgtctctgctggttgcagagacagaacag
cagaaagaggaagaggaggaggatgatgatagaagcgtttctactccatctgcaaggcga
gatttagctgaagagatagtcatgtacatgaacaatatgagcagtcctttgtcaagtcgt
gccccaagcattgagttgcaaaagcccttcgatgacagaaatgctaataaaaaaagccca
acaataatccaaccttgcaggaggtccagtcttcccccaaactccccaaggccatccagc
cttatcaaatccaagagttatcatgcaagaaatgaagaaaggacaagagacaggctctgg
tcatccccagcttattccccaaatagtccagcaaaggaacagccacaagatgcaactagt
gcattaacacttgtgtcttcaccgtcattcaacttggatacgctgttaacacccaagttt
gatgttctaaaaagcagcatgttttctgctggaaaaggggttgcagagaaagctagcaag
tggtactcaaaatttacaatgtatgctgcatcctcaaaggatcaaaattcagaccgagca
agtgtttcatctcttggagctctggactcagagtctacttctctaactgatgaagatgtc
tgcaatgattttgaaagtgcttctcctcaggagaacactacatcagaaattaagggaatt
ggcctcagcaggacaagcctagaaagctcggcttcccatgatggctcatcaaaacaattt
gaccagtgtggttctctttcaaagttccctttacctgacaaatcagagttgatatcttct
tgcagtacaagcagtaccagtgtgtttcagaactacgctatggaggtcctcatctcaagc
tgttcacgatgtagaacttgcgactgtttggttcatgatgaagaaatcatggcaggttgg
acagcagatgattcaaatctcaacaccacgtgtccattctgtggcaatttattcctgcct
tttttaagcatagaaatccgagatctccggcgaccgggacgctttttctttccctgcagt
tacttcctgaagtccagcccttctacagaaaacatgcagtacccatcaattttctcaaat
cagagcgggaagtcctgtaacactgcagctactgttggccttgctacatctctaatgtct
gttcaagaggatataaattcgaacagcaaatctaagcagcatgagaatagttgtgccaga
agtatccagatcccctcaggaagaagacaaaatacctctgggtcagaatgtacaagtcac
cctgtagcaaggagtatcagtacttttggtccactggaagaagatgagaaggaaaaccag
aagatcagccatatcattcctactggtagcctgcctgctactttgcaaggaccaacagat
tccttgggcctagaatggcgcttgcctagtcctgatcctataacagttccttatctcagt
cctctagtggtatggaaagagcttgagagcttgcttgaaaatgaaggggatcatgcaata
acagtggcagacttcgtagatcatcaccccattgtgttctggaatttggtgtggtatttc
aggcgcttggacttgcccagcaacttaccaggattaatactttcttctgagcactgtaac
aaaaactccaagattccacgaagctgtatgtcagaggacagtaaatatgttcttattcag
atgctatgggacaatatgaaattgcaccaggatccaaggcagcctctgtatatattgtgg
aatgctcagagtcaaaatcgcactcttttgtttgagacccagaagtacccaatggtccat
ttattgcagaaagacgacgactcctttaatcaggagctcttgagaagtatggtgaaaagc
attaagatgaatgatgtgtatggaccaatgagtcagatattggagagattgaacaaatgg
ccacatatgaaaagacagcggagtctttacagagaaatactatttctttcacttgttgct
ctaggaagagataacattgatatagatgcttttgacagagagtacaaaatggcctatgat
cgtctcacagctagtcaagtgaagaacactcataattgtgatagaccaccaagtactgga
gtgatggaatgcagaaagatttttggagaaccatatctttaa
DBGET
integrated database retrieval system
