Strigops habroptila (Kakapo): 115613284
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Entry
115613284 CDS
T08851
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115613284 (AFF2)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115613284 (AFF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
115613284
NCBI-ProteinID:
XP_030354404
LinkDB
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Position
9:32110070..32452257
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AA seq
1266 aa
AA seq
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MDLFDFFRDWDLEQQCHYEQDRSALKRKEWERRNQEVQQDEDLFASGFNLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNSVPQTPIDKNEQNFFPEPRNRMIP
SHQISGHSSTSMPPPSSLSSNSTLLHSHQSSRKSRTDWSRGGHNSSGAQPSQSSSQQSRT
KHSSSHDQPQGRYEDLYSCQSEQHKSGGTEEANSMAASSHSRRHTHSKSAPGEHTYKENS
HSKSPAELEFVGHGPGSPLPSTSLLSANNGLSSQNFPPGLHCKNSMVQQKPTAYVRPMDG
QDQVPNDSPELKPPIEIESGYGNQSFGTLLEGKVNTPSSKNKVPKLTIPPVSEVPNDSSC
VEDILREMTHSWPPPLTAIHTPGKAEQTKFSIPSKDSQHLTSGYNVQKWSDPAGKVATKS
VPQKSMLEDDLKLSSDEDDNEQAAEKTKLRNIPVNSLPVPAAHATGLAHSSGGSGSSSES
ESSSESDSDSESSSSDSECNEESRSATPEPEPPSTNKWQLDKWLNKVNPHNKTIINNQNE
PHSETSSQTQSNQQAEGPNKGKLNSSLPPTDSKDRAILSPIREKAKPRVAQKTPEAKSSK
QKSPAHNEPTSQRTTGKKQPKKVERTSSVEEYNWPKPNNTSNTPKEKDTQEPPEQPKVRT
KAAVGKTAPRKEPRTSTGLTSEKKKYRGPSKIVPKSREFIETDSSTSDSNTDQEESLQAK
VLPACPGSANGVKAKDSGSNILSVSSLTSNGSNTSIDQTSNDLEEQLFSPIPIVQNELLS
PLREYEELKSLWVKIDLSLLSRIPGQEPFETTSVKSEPREANVKHRRPSRESPTPAAEKP
PTKSKRKHKQTESLDTFVESKKQRLEDSSASCLLPPCISPIPNHRLTSTKESSGNSVKKV
AKKREEKLFPPPLSPLLDEPVHRRHSSDNSSFSQETNITNTSQTSNSSSSVSKHRKNENK
SSSNPKGMCEEESHNTPTANPLLDTSHLETDIWSAMPTLSNGSSESRRPKITFDDVLHNA
DYYMQEAKKLKHKADALLEKFGKAVNYADAALSFIECGNAMERDPLEAKSPYTMYSETVE
LIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKNS
SKASQAPSPWGGNGKSTETPSPMSLSPSPVSSAGSSTGTTGSSSAGTITIPQRIHHMAAS
HVNITNNVLRSYEHWDMADKLTKENKEFFVDLDSVMGPLTQHSSMTNLVRYVRQGLHWLR
IEAHLL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgactttttcagggactgggacttagagcagcagtgtcactatgagcaa
gaccggagtgcacttaagcggaaagaatgggagagaagaaaccaggaggtccaacaagat
gaagatctttttgcttcaggttttaacctctttggggaaccctacaagacaaataaaggt
gatgcccttgcaaaccgtgtccagaacacattgggaaattatgatgagatgaaggacctg
ttaaccaaccattccaaccagagtcaccttgtaggaatcccaaagaattctgtcccacag
acacccattgacaaaaatgaacagaactttttcccagaaccgagaaacaggatgatccca
tctcatcagatcagtggccactcatcgacatcaatgcctccaccttcttcgttgtcatct
aattctactttgctacacagtcaccagagtagcaggaagtcaaggacagactggtctcgt
ggtggtcacaactctagtggggcccagccaagccaatccagtagtcagcagagtcggaca
aagcatagctcctctcatgaccagccacagggcaggtatgaagacctctatagttgtcag
agtgagcagcataaaagtggaggaactgaggaagcaaattctatggcagcatcttcacat
tcgaggaggcacactcattccaagtcagcacctggagaacatacttacaaagaaaacagt
cattcgaagtctcccgcagagcttgagtttgtaggtcatggtcctggatctccacttcct
tccacttcgttgttatctgcaaacaacggtctttcgtctcagaatttcccaccaggactt
cactgcaagaacagcatggtccagcaaaagcctacagcctatgtcaggcctatggacggt
caggaccaggtacccaatgactcacctgaactgaaacctccgatagaaattgagagtgga
tatggaaatcagtccttcggaacactgctggaaggaaaagtgaacacacctagttcgaag
aacaaagtaccaaagctcaccattcctcctgttagcgaagttcccaatgactccagctgt
gtggaagacatattacgggagatgacccattcctggcctcctcctcttactgctattcac
actcctggcaaggctgagcagaccaagttttctatcccaagcaaggactcccaacatctg
acctcaggatacaatgtacaaaagtggagtgatccagcagggaaagttgcaactaagtca
gtgccacaaaagtcaatgcttgaggatgatctgaaactcagcagtgatgaagatgacaat
gaacaggctgctgaaaagacaaaattgagaaatattcctgtaaacagcctgcccgtgcca
gcggcacacgcaactggcttagcccattccagcggcggctccggcagctccagtgagtcc
gagagcagctccgagtccgattctgacagtgagagcagctccagtgacagcgagtgcaac
gaggagtcacgcagtgccacgccagagcctgaacccccctcaacaaacaaatggcagctg
gataaatggctaaataaagtgaacccccacaacaagaccatcatcaacaatcaaaatgag
cctcacagcgagaccagctcccagacccagagcaaccagcaggctgaagggcctaacaaa
gggaaactcaacagcagcctgcccccgactgattccaaagaccgagcgatccttagtccc
atccgagagaaagccaaaccgcgggttgcccagaaaaccccagaggcaaaaagctccaag
cagaagtcaccagctcataatgagccaacttcacaaaggactactgggaaaaagcaaccc
aaaaaggtagaaaggacttccagtgtagaagagtataactggcccaaaccaaataatacc
agcaacactcccaaagaaaaagacacacaggaaccccccgagcagccaaaggttcgaact
aaagcagcagttgggaagaccgccccaaggaaagaaccacgaactagcacaggtctcact
tcagagaagaagaagtacagaggccccagcaaaattgtccccaaatcccgggaattcatt
gaaacagattcgtctacttctgactcaaacactgaccaggaggagagcttgcaggctaag
gtattgccagcttgccctggctctgccaatggtgtcaaagcgaaggactctggcagtaac
atcctcagcgtaagtagtttaactagcaatggcagcaacacatccattgaccagaccagc
aatgacctggaggagcaactcttttctcctattccaattgtacaaaacgaacttctgtcc
ccactgagagaatatgaagaactcaaatctctgtgggtgaaaatagaccttagtttactc
tctagaatacctggacaagagccttttgagaccacgtctgtgaaaagtgaaccaagagag
gcaaatgtgaaacacaggcgaccatctcgagagtcccctaccccagcagctgaaaaacca
ccaacaaaatccaaaagaaaacacaagcagacggaaagcctggatacctttgttgaaagc
aagaagcagcgcctggaggactcttcagcttcatgcctactcccaccttgtatctctcca
ataccgaatcacagattaaccagcactaaagagagcagtggtaactcagtgaaaaaggtg
gcaaagaaaagagaagagaagctgttccctccaccgttatccccactcttggacgagcct
gtgcaccggcggcacagcagtgacaacagctccttcagccaagagaccaacatcacaaac
acctctcagaccagcaactcttcctcctctgtttctaaacacagaaagaatgaaaataaa
tcttcttctaaccccaaaggaatgtgtgaggaagaatctcacaatacaccaacagccaac
cctcttcttgacaccagccatctagaaacggacatctggtctgcaatgccaactctttcc
aatgggagttctgagtccagaagacccaaaataacatttgatgatgtgcttcacaatgcg
gattattatatgcaggaggctaagaagcttaagcataaagcagatgcattgctggagaag
ttcggcaaagcagtgaattatgctgatgctgccctctccttcatcgagtgcgggaatgct
atggagcgagatccattagaagctaaatctccatacaccatgtactcagagactgtggaa
ctcatcaggtatgcaatgagactcaagaatttcacaggctcttctgccacggaaggggac
aagaaattagcagttttatgctaccgatgcttatcacttctctacttgagaatgtttaaa
ctaaagaaggaccatgctatgaagtactccagatctctgatggaatattttaagaactct
tcaaaagcctcacaggccccctcaccttggggcggcaatggaaagagcacagaaacgcca
tcgcccatgtccctgagcccgtcccccgtcagctctgctggaagcagcacgggcaccact
ggctcctcctcagcagggaccatcaccatccctcagcgcatccaccacatggctgccagc
catgtcaacatcaccaacaacgtcctgcggagctacgagcattgggatatggctgacaag
ctgactaaggagaacaaagaattctttgtagacctggactcggtgatgggacccttaaca
caacacagcagtatgaccaatctggttcgttatgttcgccaaggactccactggctccgc
attgaggctcatttgttgtag
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