Strigops habroptila (Kakapo): 115613362
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Entry
115613362 CDS
T08851
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115613362 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115613362 (MYO5C)
04131 Membrane trafficking [BR:
shab04131
]
115613362 (MYO5C)
03029 Mitochondrial biogenesis [BR:
shab03029
]
115613362 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shab04812
]
115613362 (MYO5C)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
115613362 (MYO5C)
mRNA cycle factors
P-body specific factors
115613362 (MYO5C)
Membrane trafficking [BR:
shab04131
]
Others
Actin-binding proteins
Myosins
115613362 (MYO5C)
Mitochondrial biogenesis [BR:
shab03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
115613362 (MYO5C)
Cytoskeleton proteins [BR:
shab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
115613362 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
DUF5646
Motif
Other DBs
NCBI-GeneID:
115613362
NCBI-ProteinID:
XP_030354593
LinkDB
All DBs
Position
9:complement(12951648..12987051)
Genome browser
AA seq
1736 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDRFLHVQLEDGTELNYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFMESRLIYTYSGIILVAINPYKELPIYGDA
IIHAYSGQNVGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSRSSSNAHVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDQSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASATQPEYKHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMVETQKTFALLGLKGDFQMDVFKMLAAILHLGNVEITAVGDERSAISLKDKHLDIFCE
LLDLNWDKMAQWLCHRKIITTSETVIKPMTRAQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQRVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKDSKFHLCANFFQDSPVSISPF
SSTINIKSARPVLKSPNKQLRMTVGSKFRNSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDHNQYQFGRTKIFFRAGQVAYLEKLRSDKLRHACIMVQKSVRGWLQRKKFLRIK
QAALTIQQYFRGQRTVRQAITARTLKETWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAY
TRGFLARKKYQKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKIEE
QSRENHGLLERLTSLASTHMNDMDTIQKLELDLQKLTAQKRTCEEKGKKDKEDSEQKILK
LENWNKELQEQKKTLEIKLHEKTEEMKEKMDDLTKQLFNDVQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKILKEEKNQLQQQIQQEIVIQDGLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAQSQKRELREKMSEVTQQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVMESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVSELENQKLDLENRLQEQTVKLKEMSHRLHYEQEGERTQRRSN
EAQNEVSIKEKERLKVNTQEIEGLSNGLVQDETQDEVQSKIKQETTRLTVENMDLEEKLD
MKDRIIKKLEDQIKTLTKTIEKAEAHVPNSSKEYIGMIEYKKEDEERIIQNLILDLKPRG
VVVNMIPGIPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKEHSEDFEMMSFWLS
NTYYFLNCLKQYSGEEEFMKCNTPRQNENCLKHFDLSEYRQILSDLAIRIYYQFIVVMEN
SIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDNTDTYTMTSILQQLSYFYSTMCQNG
LDSELLKQAVKQLFFLIGAITLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQSSN
AKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKRVTPS
FVRKVQAMLNNREDAPQLMLDTKYLFQVMFPFTPSPHALELIQVPSSFKLGFLTRV
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagaccgttttctccatgtg
cagttagaagatggaactgaactgaactaccctgttgatccagctgctttgccacccctc
cgaaaccctgacatacttgttggtgaaaatgatctcactgcacttagttatctccatgaa
cctgctgttctacacaatcttaaagttcgttttatggagtctaggctaatctacacctat
agtggaataattttggttgcaataaacccctataaagagttgccaatatatggagatgct
attatccatgcatatagtgggcaaaacgtgggcgacatggatccacatatatttgctgtg
gcagaagaagcatacaagcaaatggcaagaaataacaaaaatcagtctattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaagatacactatgagatactttgccact
gtgagtaggtcaagcagcaatgcacatgtggaggataaagtattggcatccaatccaata
actgaggctattggcaatgcgaaaaccacacggaatgataatagcagtcgatttggaaaa
tacactgaaatcagttttgatcagagttaccagatcattggcgctaacatgagaacatac
ctgcttgagaaatccagagttgtctttcagtcggagaatgagagaaactaccacatattt
tatcagttgtgtgcatctgctacgcaacctgaatataagcatctcaaattgggaagcgca
gaagaatttaactacacaagaatgggtggcagcacagtaatagaaggagttgatgacaga
gcaaatatggtggagactcagaagacatttgccttactgggtctgaagggggattttcag
atggatgtttttaaaatgctggcagcaatcctacacttgggcaacgtggaaataacagct
gttggagatgaaagatcagccatcagtctgaaggataaacatcttgatatattctgtgaa
ctgctggatttaaactgggacaaaatggcacaatggttgtgccaccgaaagattatcact
acctcagagactgtaataaagccaatgacaagagctcaggctgttaacgcaagggatgct
ctggcaaagaagatctattcccacctatttgactttattgtggaaagaattaaccaagct
ttgcagttccctggcaaacaacatacttttattggtgttttggacatttatggctttgaa
acatttgatgtgaatagttttgaacaattttgcatcaattatgctaatgagaaactgcag
cagcaatttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaattgacttctatgacaaccagcgtgtcattgaccttattgaagctaaa
atgggaattttggaacttctggatgaagagtgcttgttgcctcatggaacagatgaaaac
tggcttcaaaaactatataataattttgtcaataaaaatgcactctttgaaaagccaagg
atgtcaaacacatctttcatcattcaacactttgctgataaggtagaatacaaatgtgaa
ggatttctggaaaaaaacagagatacagtacacgaagtattgattgaaatcttgaaagac
agcaagtttcatctgtgtgcaaatttttttcaagacagtccagtgtccatttcacctttc
agttcaactataaacatcaaatctgcaagacctgttctcaagtcccctaacaaacaactc
cggatgacagttggcagtaagttccggaattctttgtctttacttatggtgacactcaat
gcaaccacccctcattatgtacgatgcataaagccaaatgatgagaagttgccttttgag
tttgattcaaaacgagttgctcagcaactgcgagcatgtggtgttttggaaactattcga
attagtgcacagagctacccgtccaggtggacttacattgagtttttcagccgttatagc
atccttatgacacagcaggaactttccataaatgataagaagcagatttgcaagattgtt
ttgcagcggctaatccaggatcataaccaatatcagtttgggagaacaaaaattttcttc
agagcaggacaggttgcttacttagaaaagctgcgatcagacaaactgagacatgcatgc
atcatggtccagaagagtgttcgaggctggctgcagcggaagaaattccttcgtataaaa
caagcagctcttacaatacagcagtatttccgggggcagcggactgtacggcaagctata
actgcaagaactctgaaggaaacatgggcagctataattattcagaaatactgtcggggt
tacctggtccgtagactttgccagctcatccatgtggctgctgtaacaattcaagcttat
acaagaggatttctagcaagaaaaaagtatcagaagatgcttgaagagcacaaggctgtg
atccttcagaagtatgcccgtgcatggcttgccaggcgcagatttcagaatattcgtcgg
tttgtattgaatatccagctttcatacagagttcagcaactgcagaagaagatagaagag
cagagtagagaaaatcatggtttgctggagcgattgaccagtctggcttctacccatatg
aatgacatggatacaattcagaaacttgaattggatcttcaaaagttaactgctcagaag
agaacatgtgaagagaaagggaaaaaagataaagaggacagtgaacagaaaatcttaaaa
cttgagaattggaataaagaattacaagaacagaaaaagaccttagaaataaagctccat
gaaaaaactgaggaaatgaaagagaaaatggatgacctcacgaagcaactcttcaatgat
gtacaaaaagaagaaaatcagcgaatgatactcgagaaaaatttccagaatcagaagcag
gactatgaaaaggagattgagttgctcaagggagaaattaagattctgaaagaagaaaaa
aatcagctacagcaacaaattcagcaagaaattgtcattcaggatggcttgaaaatggaa
gtaggacaacttacaaaacaagcacagaaaatacctgagttacaaaaggaaattgagctg
ctgcagacacaaaaattggatgttgaaaagcaggcccagtcacagaagcgagaattgagg
gaaaagatgtcagaagttacacaacagcttcttgaaagttacgattttgaagatgtgaga
agcagactctctacagaggatttggaacacctaaatgaggatggagaactgtggtttgct
tacgagggcttgaaaaaagctacaagagtaatggaaagtcatttccagtctcagaaagaa
atatatgagaaggagattgaaggtttgaactttaaagttgaacatctcagccaagatatt
aatcatctacaaaagttatttcgagaggaaaatgacataaatgatggtattcgacttgaa
gttagcagacttacttcagaaaacctggtgatcccagatcttaaacagcaagtttctgaa
cttgaaaatcaaaaactagatcttgaaaaccgtcttcaagaacagactgtgaagttgaaa
gagatgtctcatcggctgcattacgagcaagaaggggagagaacacaaagaagaagtaat
gaggcccagaatgaagtaagcataaaagaaaaagagagactgaaagtcaacacccaagaa
attgagggtctgagcaatggtttggtgcaagatgaaacccaggatgaagtacaaagcaag
ataaagcaagagacaacacgacttactgttgaaaacatggatcttgaggaaaaactagat
atgaaagatagaataataaaaaaattggaggatcagatcaaaactcttaccaagactatt
gaaaaagctgaagctcatgtgccaaattcgtccaaagagtacattggaatgatagagtac
aaaaaagaagatgaagaaaggatcattcaaaatctcatcctcgatttaaagccacgtgga
gttgtagttaatatgatacctggcattccagctcacatcctgttcatgtgtgtgagatat
gcagattatctgaatgatgctgacatgctgaaatccttcatgaatgtaaccattgatggc
atcaagcaagttgttaaggaacattcagaagactttgagatgatgtccttctggctttcc
aatacatattattttcttaactgtttgaagcagtacagtggggaagaggaattcatgaag
tgtaacactccacgtcagaatgagaactgtttgaagcattttgatctctcggaatacaga
cagattcttagtgatttggccattcgtatctattatcaattcattgttgtaatggagaac
agcattcagcccatgattgtaccaggcatgctggaatatgaaagtcttcagggaatttct
ggtttgaaacctacagggttccgtaaacgttcttctagtatagacaacacggatacctac
acgatgacctctatcctgcaacagctcagctatttttatagtactatgtgccagaatggc
ttggactctgagcttctaaagcaggcagtgaagcagcttttctttctgattggagctatc
accctcaatagcctcttcctccgcaaggacatgtgctcgtgtagaaaaggaatgcagata
agatgtaatatcagctacttggaagaatggcttaaggacaagaatcttcaaagcagcaat
gccaaagaaactttggagcctctatctcaggcagcctggctccttcaggtcaaaaagatc
acagatgatgatgccaaggaaatatgtgaacactgcacatctctttctactgtgcagata
gttaagatcctcaactcatacactccaatagatgattttgagaaaagagtgactccatca
tttgttcgtaaagtccaggctatgctaaacaatcgtgaggatgctccacagttgatgctc
gataccaaatatctctttcaagtgatgtttcctttcaccccctctccacatgccttggaa
ctgatacaagtccccagcagcttcaaacttggctttcttacaagggtttag
DBGET
integrated database retrieval system
