Strigops habroptila (Kakapo): 115613454
Help
Entry
115613454 CDS
T08851
Symbol
TULP4
Name
(RefSeq) LOW QUALITY PROTEIN: tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
shab04990
]
115613454 (TULP4)
Domain-containing proteins not elsewhere classified [BR:
shab04990
]
Other domain-containing proteins
Tubby family proteins
115613454 (TULP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
SOCS_box
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Prp19
WD40
Beta-prop_HPS5
WDR55
Beta-prop_ELP1_1st
EIF3I
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
115613454
NCBI-ProteinID:
XP_030354720
LinkDB
All DBs
Position
10:complement(1269266..1407275)
Genome browser
AA seq
1575 aa
AA seq
DB search
MYAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDADGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGILSMSWNYPSFLVEDSSESDTDSDDYSPP
QDGPAAYPVPVQNTKPLLTVSFTSGDISLMNNYDDLSPTIIRSGLKDVVVQWCTQGDLLA
VAGMEKQSQLVDLSNGSLLKSALVKFYNVRGEHIYTLETPVQRPIISICWGHRDSRLLMA
SGPALYVVRVEHRVSSLQLLCQQTIASCLRDDKDISKLTLPPRLCSYLTTAFIPTIKPPI
PDPNNMRDFVSYPTAGNERLHCTMKRTEDDPEVGGPCYTLYLEYLGGLVPILKGRRISKL
RPEFVIMDPKTDGKADEIYGNSLISTVIDSCNCSDSSDIELSDDWAAKKSPKISRASKSP
KLPRINIEARKSPKMSRAAQEISRSPRLPIRKPSIGSPSLNRREFPLEDITQHNYLAQVT
SNIWGTKFKIXGLAASLPTNLGAVIYKTXLLHLQPRQMTIYLPEVRKISMDYINLPVFNP
NVFSEDEDDLPVPGAPGAPASSPPCTVNIPIAPIHSSAQAMSPTQSIGLVQSLLANQNVQ
LDVLTNPPAESGGEGAGPFPGPPGRFPGPGGPLAGAGGDMGRAAPVPPALAPPPPPPAIT
LADLXDHGDREHEPLPKAKPPRPAPQLVEGDAVVFGATPELQLNKMNPPPPYPGTIPLRR
LPPLPPPPGPPQPPLDLCLKKGEFSLYPAGNYQTPLGYERITTFDSSGNVEEVCRPRTRM
LCAQSTYTLPGPGSSATLRITXAEKKMQQPCTSATLNRLTVPRYSIPTGDPPPYPDIASQ
LAQGRSITQRLDSSIIHATLRRNSREAALKMAQLVEGQRATLQLPPKAKSNVVTAQYQQR
VPTALYTCSQCSSSSSGSGGGSNPSAGGVGSIASANASSSTSSIGGMRPDLSTGSASQHS
SVMAHSVSTSPLASQSSYSLLSPPDNSRDRADYINSAFTEDEALSQHCPVEKSIRHVPVS
LAEAALGVKRPPPYQWDPMVSEEIWVPQERTSQSSVPNPLKPTPLIIGQAQHLDMSRVPF
VSPKSPTSPTATFQTSYGVGVPYPGSYSAPPLQGMQPPCSPKEALAPTQFAQQEPTVVLQ
PGYPSNLXYCPLPPXYPGSSACSSLQLPQXRLAPVSSYSACPPVQNPQGTLPPKPLLVWE
KPVMSPPPXELQGHVGTEVMVETADTFQEVLSLTESPVPQRTDKFGKKSRKRLDSRAEEG
NVQAITEGKVKKEARTLTDFNSLISSPRLGREKKKVKSQKDQLKSKKLNKTNEFQDSSES
EPELFISGDELMNQSQGSKKGWKTKRSLRTASELDEFKCRKASEKEDGRLGSQGFVYVMA
NKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAV
QAFAVALANVTQRLK
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcagcagtggaacatgggcctgttctttgcagcgattccaacatcctctgcctc
tcctggaaagggagagtccccaaaagtgagaaggagaaaccagtgtgcaggaggcggtac
tatgaggaaggctggttggcaacaggcaatggcagaggagttgtaggtgtcacttttact
tccagccattgcaggagggaccggaacacccctcagagaatcaacttcaatttgaggggc
cacaacagtgaggtcgtgctggtgagatggaatgaaccgttccagaaattagcaacctgc
gatgcagatggagggatatttgtttggatacaatacgaaggcagatggtcggtggagctt
gtgaacgatcgtggggcacaggtaagcgactttacatggagccatgatgggactcaagca
cttatctcctatagagatggatttgtgctggttggttcagtcagcggacaaagacactgg
tcttcagaaataaacttggagagtcagatcacctgtggcatatggactccagatgaccaa
caggtactatttggcactgctgatgggcaagttatcgtcatggactgccatggccgaatg
ctggcccacgtgctccttcacgaatcagatggcatcctcagcatgtcctggaactaccct
agtttcctggtggaggacagcagtgagagcgacacagactctgacgactattccccaccg
caagacggaccagctgcgtatccagtcccggtgcagaacaccaagccactacttactgtc
agcttcacgtcgggagacatcagtttaatgaacaattacgatgacttatctcctactatc
atccgctcagggttgaaagatgtggtggtacagtggtgtacacaaggagacctattggca
gtagcaggcatggagaagcaaagccaactggttgacctcagcaatggttccttgttgaaa
agcgcacttgtcaagttctacaatgtgcgtggggaacacatctacactctggagacacct
gtgcagcggcccatcatctccatctgttggggtcacagggattcacgcctgctgatggct
tccgggcctgcattgtacgttgtcagagtggagcacagggtctccagcctgcagctgctg
tgccagcagaccatcgcgagctgcctgcgggatgacaaggatatcagcaaactgaccctg
ccccctcggctctgctcatacctcaccactgcctttataccaacaatcaagcctcctatc
ccagacccaaacaacatgagagattttgtcagctacccaacagctggtaatgaacgactt
cactgcacgatgaagcggacagaagatgacccagaggttggtggtccatgttatactctg
tacctggaataccttgggggactggtgcctatactgaagggacgtcgcattagcaagttg
cggccggagtttgtcatcatggatcctaaaacagatggaaaagcagatgaaatctatgga
aacagcttgatttccactgtgattgacagctgcaactgctctgactccagcgatatcgaa
ctgagtgatgactgggcagcaaagaaatctcccaaaatcagtcgagctagcaaatcaccc
aaactccccagaatcaacatagaagctcgcaaatctccaaagatgtcacgagctgcgcag
gagatatcaagatcaccaaggctgccaataaggaaaccttctattggttcaccaagccta
aaccgaagagagtttcctttagaagatattactcagcacaactaccttgctcaggtcaca
tctaatatctggggaaccaaatttaaaattngtggtttggctgcttcgctaccaactaac
cttggtgcagtaatatataaaaccnagttgctgcatctgcagcccagacagatgacaata
tatctcccagaagtgcgcaagatttcaatggactacattaacctgcctgtctttaatcca
aatgttttcagtgaagatgaagatgatttaccagtgccgggcgcgccgggcgcccctgcc
agcagcccgccctgcaccgtcaacatccccatcgcgcccatccacagctcggcacaggcc
atgtcgcccacccagagcatcggcctggtccagtcgctgctggccaatcagaacgtgcag
ctggatgtgctgaccaatccgccggcggaaagcgggggcgaaggggcggggccgttcccg
ggcccaccgggccgcttcccgggcccgggggggccgctggccggcgccggaggggacatg
ggccgcgctgcccctgtgcccccggcgctcgccccgccgcccccgccccccgccatcacc
ctggccgacctgncggaccacggcgaccgcgagcacgagcccctgcccaaggccaagccc
ccgcggccagcgccacagctggtggaaggagacgccgtcgtcttcggggccactccggag
ctgcagctgaacaagatgaacccgccgccaccctaccctggcaccatcccactgcgccgc
ctgccgcccctgccaccaccgcccggccccccgcagccgcccctcgacctctgtctgaaa
aagggggagttctccctctaccctgccggcaactaccagacaccgctggggtacgagcgg
ataaccacgttcgacagcagcgggaacgtggaggaggtgtgccggccccgcaccaggatg
ctctgcgcccagagcacatacaccctgccggggcccggcagctctgccaccttgcgtatc
acgnctgctgagaagaagatgcagcagccctgcaccagcgccaccctgaaccgactcaca
gtcccccgttactccatcccaaccggggacccgccgccctaccctgacattgccagccag
ctggcccagggcagaagcatcacgcagaggctggacagcagtatcattcacgcgactctg
cggaggaacagcagagaggcagccttgaaaatggctcagctggtggaaggtcagagagcc
acgttgcaacttcctccaaaagccaagagcaacgtcgtgacggcgcagtaccagcaaaga
gtacccaccgccttgtacacctgcagccagtgcagcagcagcagcagcggcagtggtggc
ggcagcaacccaagcgctggtggtgtgggcagcatcgctagcgccaatgctagtagcagc
acttccagtattggtggcatgaggcctgatctgagcacggggagtgcctcccagcacagc
tctgtcatggctcactctgtcagtacttcgcctctggcctcccagtcatcctacagcctg
ctgagcccgcctgacaattcccgtgaccgagcggattatatcaactccgccttcacggag
gatgaggccctttctcagcactgcccagtggagaaatcaatacggcacgtgcccgtgtcc
ctggcagaggctgccctcggtgtaaaacggccaccgccgtaccagtgggaccccatggtg
agtgaagagatatgggttcctcaggaaaggacatctcagagctcagtgcccaaccctcta
aaacctactcctctcatcatcggtcaagctcaacatctggatatgtctcgagtaccgttt
gtttcccccaaatctccaaccagtcccactgccactttccagacgagttatggggttgga
gtaccttacccaggaagctacagtgcccctccccttcagggaatgcagcctccatgctcc
cccaaagaagctctggccccaacacagtttgcacagcaggagcccacagttgtgcttcag
ccaggttatccatccaacctcncctattgccctttgccacccnattacccgggaagtagc
gcctgctctagtttacagctgccacaanntcgccttgcacccgtgagttcctacagcgcc
tgcccacccgtacagaacccccagggcaccttgccccccaaaccgctccttgtgtgggag
aagccggtgatgtctcccccgccgncggagctgcagggccacgtgggcacagaggtgatg
gtggagacagcagacaccttccaggaagtgctctccttgacagaaagccctgttcctcaa
agaacagataaatttggcaagaagagccggaagcgcttggacagtcgagctgaggaagga
aacgtgcaggccatcaccgagggcaaggtcaaaaaggaggcaaggacgctgactgacttc
aattcgctaatatccagccctcggctggggagggagaagaagaaggtcaagagccagaaa
gaccagctgaagtccaagaagctaaacaagacaaacgagttccaggacagttcagagagc
gagccagagctttttattagcggggatgaactgatgaaccagagccagggcagcaaaaaa
ggttggaaaaccaaaaggagtttaaggacagccagtgaactggacgaattcaagtgccgg
aaggccagtgagaaggaggacgggaggctgggaagccagggctttgtgtatgtgatggcc
aacaagcagccgctgtggaatgaggcgacacaagtgtaccagctggacttcggagggcgg
gtgacccaggagtcagcaaaaaacttccagattgagctggaaggacgacaggtgatgcag
tttggaaggattgatggcaatgcttatattttggactttcagtatccattttctgcagtg
caagcctttgctgttgctctggctaatgtgactcaacgcctcaaatga
DBGET
integrated database retrieval system
