Strigops habroptila (Kakapo): 115613523
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Entry
115613523 CDS
T08851
Symbol
HEATR1
Name
(RefSeq) HEAT repeat-containing protein 1 isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115613523 (HEATR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shab03009
]
115613523 (HEATR1)
Ribosome biogenesis [BR:
shab03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
115613523 (HEATR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_EZ
HEAT_2
HEAT_GCN1
RTP1_C1
TOR1L1_N
CLASP_N
Vac14_Fab1_bd
TPR_IMB1
Motif
Other DBs
NCBI-GeneID:
115613523
NCBI-ProteinID:
XP_030354908
LinkDB
All DBs
Position
10:complement(16396331..16431857)
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AA seq
2157 aa
AA seq
DB search
MTSLAEQLKRLALPQSDPSLLNRSEVASLLFSSKEAATIDRDTFFAMGCTGLEELIGIDP
SFEVFQSSLFSSTSKGLERSVQSKAVNQQLNKNISLFLIHLSPYFMLKPAQKCLEWLIHR
FHIHLYNQDSLIGCVLPYHETNLFVRVIQLLNITSPTHKWHWMDPIRKPGVPLARGTVIT
HCYKDLDFMDFICRLVAKSVKVFSECPGNSAQLRVLLVFYASTIVSALGAAEKITDAIIS
MLLPYIQKGLKSSIQDYRAATYMIICQMTVKVTVETPLVHSLMLQISKTLSKVPSLVRDG
LACLNLLLQTQKRDKLGKKPFHYLCRTPELVTLLQGLSTDYDISPLLHYLLPHLVSTVMK
SDTEEQEESEEAEREIYVRHLEAILQSIPLEKDLDNLLASKFLEEFISCGTETESNPTKM
AALNQKVLPLIRLLERKYPKALESVLEKHLEDCTDEADQNLFHQFISLSLSCGKYKFLED
SDTSLLLSLNHPQPAVRVLALQHLKDIIESSKEGFDQSFIEEAILDRLKDDNKDVVMSAL
SSLEIFSKQVNPEVVVLSILDIFQKADLSKDGKWCKVLERAINILVEEEILKEKKELLDE
AVMRLLPFMVITNANSKSSDWKMAVCLSESDLCSLHPLLKGWQEALEEAIKSSKTAELIE
VANKKMILLFSKNMTSGDPSLLLPMVDDLILVAESESDSVRQKVTTHIIGSVLVQCCCNT
QMKESYFSVAIRVFCFLDKKIKNLRSCDPDEETPLNWSVETTEETLVPKDLLTACLEKLD
SDQAAHAEESAMFLFLLKTFINGLKSPLSFSEEKTWWNPESLNQDGQDYLHLLLGLFDLL
VCGASEGSNAVQYRALMNLLLRVHLKDSEVLFKFLSILWTYSYNLSNQLNYEVNAMLQTQ
ALYIGYALLESQTCQKKKQLLLPSSPVVISLLINLGSPVSEVRRAALNCLHSLRGIKESL
FHPVLQHLEQKTEEIISDPKYIAQIMETLFEELETQPKQKSQQKKLSEALENILDCVQNP
IFPSYITRNLMKIIHEVHGEMILSHLLPALDRLLEKVFKNPEAMLKDEVVLLHLILGKFN
EYSATLLCKNQQSLDLFIKSLHAAKKIYEEIPPFQITALGQITKPFFAALSDGMVQQKLL
KVLFDLLLNCKNPLCAQTISSVFKGISVCAEQIVRELEPPGKTTSLATVQQTRRQKMQQQ
RKPQDAELAPETSHFSWQRIMLILELLQHKKKLRRPQALVPPLFNLLSRCLEPMASEEEN
MEYTKQLILSCLLSICQKLTSERSKIPAGTLDKEKFNVELIVQCIRISKMPQTHHHALLL
LGAVAGMFPDKVLHNIMPIFTFMGANVLRLDDTYTFQVINKTVQMVIPALIQAEDSDLSG
SSGSVEEVVIKIIRVFVDALPHVPEHRRLPILAQLITTVGGDKFLWVLLVLLFEQYVTKT
VTATSSTEKDAVLEADTAFWISICCEFNVQTQFQSMMKIIQYLTELPENKEDDPGPKKST
CKTKLKNQDGQLFNVECHSDKQLRHFKFLSVSFLSQLLSSQSFVKKIVECEETEELQNLE
QRLLEEVLHYINTVASSVEGNVDKPTAKFWRVLLSKSYDMLDKVNALLPTETFIPVIRGL
ITNQLPSVRRKAMDLLNNKVQQRTKWQKSQILQLLELVPELIAIAQCKRKEEEEEQAINR
QTALFSLKLLCKGFGTENPVPFVPVLKTAIDLISSEKEEKNVMGSALLCIAEVTCTLKAQ
AIPQLPRLMPALLKTLKNKKELVSNEIYLLSAVTALLKVAETLPHFLSPYLLDCLLQVVR
LEKIVLEFGPSSQISLRVSSLKTILATRLAPRILLPAVMKCYSEVANTRKNCLVPLMNIL
KEHIVSMEKEHLISHQSELTAFFMKALDFRTDHAQVDDLEEVGKTETHIIDCLISMVMKL
SEASFRPLFFKLFDWSKTESALKDRLLTFHRIADCIADKLKGLFTLFAGHLLKPFAETLN
QVNVSKTDEAFFDSENSTEKSCLLLQFTMNCLHKLFLFDTQKFLSKERAETLMMPLVDQL
ENTLGGDEKFQDRVTAHLIPCIAQFAVAMADDSLWKPLNYQILLKTRHTSPKVRFAALLA
LVEVAQKLKENYLVLLPESIPFLAELMEDECEEVEQLCQKTIQQLEVILGEPLQSYF
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccctcgcggagcagctgaagcggctggcgcttccccagagcgatcccagcctc
ctcaaccgcagcgaagtagcgtcgctgctgttcagtagcaaggaagccgctaccattgac
agggacacgttctttgcaatgggatgcactggcttagaagaactgattgggattgatcct
tcatttgaagtgttccagtccagtttgtttagttccacgtccaaaggcctggaacgcagt
gttcagtctaaagcagtaaatcagcagctcaataagaatatttcattgttcctgattcac
ctgtccccttattttatgcttaagccagcccagaagtgccttgaatggctgattcacaga
tttcacatccatctctacaatcaagatagtttgattggttgtgttctgccgtatcatgag
actaatctatttgtgagagttattcaacttttaaatataacaagcccaactcataaatgg
cattggatggatccaataaggaaacctggagtcccactggcgaggggtactgtcattaca
cactgctacaaagacctggatttcatggatttcatctgcaggctggtggcaaaatctgtg
aaggtcttttcagagtgtcccggcaactcagctcaattgagagttcttcttgtgttttat
gcctccaccattgtatcagctcttggtgccgcagagaagataacagacgctataatctct
atgctgctcccttacattcaaaagggcttgaaatcatctatacaggattacagagcggca
acatacatgataatctgccagatgacagtgaaagtgacagtggagactcccttggtgcat
tccttgatgttacaaataagcaaaacattgtctaaagtgccctcattggtcagggatggg
ctggcgtgcttgaacctgcttctgcaaactcagaagagagacaaacttggaaaaaagcca
tttcattacctgtgcagaaccccagaactggtaacgcttttgcaaggcctttcaacagac
tatgatatttctcctcttctgcattacttgttgcctcaccttgttagcactgttatgaaa
agtgatacagaggaacaagaagaatctgaggaggcagagagagagatttatgtcagacat
cttgaagctattcttcagagtataccactggaaaaggatttagataatctattggcttcc
aagtttcttgaagagtttatctcctgtggtacagagactgaatctaatcccaccaaaatg
gctgcactcaatcaaaaggtgcttcctcttatcagacttctcgagagaaagtatcctaaa
gccttagagtctgtgttggagaaacatctggaagattgcacagatgaagctgaccaaaat
ctttttcaccaatttatttctctttcattaagctgtggcaaatacaagtttctggaagac
tctgatacctcccttctacttagtttgaatcatcctcagccagctgtgcgggtcctggct
cttcagcatttgaaagatattattgaatcatcaaaggaaggctttgatcagtctttcata
gaagaagcaattcttgatcgcctcaaggatgacaacaaagatgttgtaatgtctgctctc
agttctttggagattttcagtaaacaagtcaatccagaagtagtagtattaagtattctg
gacatcttccagaaagctgatctttcaaaggatggaaagtggtgcaaggttctggagcga
gcaataaacattttggtcgaagaggagattttgaaagagaaaaaggaactcctggatgaa
gcagtaatgcggttgttaccttttatggtaatcactaatgcaaattcaaaatcttcagat
tggaaaatggctgtttgcctgtcagaatctgatctctgctccttacaccctttactgaaa
ggttggcaagaagctcttgaagaggcaattaaatccagcaagactgcagagttaattgaa
gtggccaacaagaaaatgattctgctgttttctaaaaacatgacttcaggggacccttcc
ttactattgccaatggttgatgatctgatactcgttgctgaatctgaatctgacagtgtg
agacagaaagtaactactcatataattggttcagtgcttgttcagtgctgctgcaatacg
cagatgaaggagagttatttttcagtggctatcagagtcttctgtttcttggataaaaaa
ataaaaaatctcagatcttgtgaccctgacgaggaaactcccctaaactggtctgttgaa
acaacagaggaaactttagtgcctaaggacttgttaactgcctgtttagaaaagctcgat
agtgatcaggctgctcatgcagaagagtcagccatgttcctgttcttattgaaaaccttc
attaatggcctaaaatctcctctctccttttcagaagagaaaacttggtggaatcccgaa
tctctgaatcaggatggccaagattacctgcacctccttttggggctatttgacctgctt
gtctgtggagcaagtgagggaagcaatgctgtccagtacagagcattgatgaacctctta
ctcagggtacatctaaaagattcagaggttctcttcaaattcctttcgattttatggact
tacagttataacctttcaaatcagctgaactatgaagtcaatgcaatgctacagactcaa
gctctatatattggctatgcactgcttgaatcacagacgtgccaaaaaaagaaacaactg
ctattgccatcatctccagtggtgatatctttgctaattaacttgggtagtcctgtgagc
gaagtacgaagggctgctctcaactgcctccattccttgagagggataaaggagtctctg
tttcatcctgttcttcagcatttagagcaaaagacagaagaaatcatatctgaccctaaa
tacatagcacagattatggaaactctatttgaggagcttgagactcaaccaaaacagaag
tcccagcagaaaaaattgtcggaagctttggaaaacatacttgattgtgtacagaacccc
attttcccatcatatattacaagaaacttaatgaaaattattcatgaagtccatggtgaa
atgattctttctcacctcttgcctgcactagaccggttactagagaaggtctttaagaat
cctgaggcaatgttgaaagatgaagttgttctcctgcatctcatccttggaaagtttaat
gaatattcagcaaccctcttgtgcaagaatcagcagagtctggatttatttatcaaaagt
ctgcatgctgccaagaaaatctatgaagaaattccaccatttcagatcactgctcttggg
cagattactaaaccattctttgcggctctgtcagatgggatggtgcaacagaagctattg
aaagtgttgtttgacttactgttaaactgcaagaatccactttgtgcccagacaattagc
agtgtgtttaaagggatttcggtgtgtgctgagcagatagtcagggaactggagcctcct
gggaaaaccacaagcctggccactgttcagcaaactagacggcagaaaatgcagcaacag
agaaagcctcaagatgcagaactggcaccagaaacaagccacttcagctggcagaggatt
atgcttattctagaattgttgcagcataagaagaaacttagacgtccgcaggcattggta
cctccgctttttaacctgctgagccggtgtctggaacctatggcatcagaagaagaaaat
atggaatatacaaagcagctaatcctcagctgcctgctaagcatctgtcagaaactgact
tcagagcgtagcaagatcccagcaggtaccctcgacaaagaaaaattcaatgtggaactg
atagttcagtgcatcaggatttctaaaatgccccagacacaccaccatgcactgcttctc
cttggtgctgttgctggcatgtttcctgataaagttctccacaatattatgcccattttt
acattcatgggagcaaatgtcttgcgtctggatgatacttacacattccaagtaattaat
aagacagtgcagatggttattccagctcttatacaggctgaagacagtgatctgtcaggg
tcctctggaagtgtggaagaggtggtgatcaagatcatccgtgtgtttgtggatgccttg
ccccatgtgccagagcaccgccgcctgccaatcctggcccagttgatcactacagtggga
ggagacaagttcctctgggttctcctagtgctgctgttcgagcagtatgtcaccaaaacc
gtgactgcaacatcaagcacagagaaggatgctgttctggaagcagacactgcattttgg
atttccatctgttgcgaatttaacgtacagactcagttccagagcatgatgaaaataatc
cagtacttgacagagctgccagagaacaaagaggatgatcctgggccaaaaaagtcaaca
tgcaagacaaagctaaaaaatcaggatgggcagctctttaatgtggagtgtcactcagac
aaacagcttcggcatttcaagttcttgtcagtctccttcctgtcacagcttttatcctct
cagagttttgtgaagaagatagttgaatgtgaagaaacagaagagctgcagaatttggaa
cagaggctattagaagaagttcttcactatattaacactgtggcatcttcagtggaagga
aacgtggacaagccaacagccaaattttggagggttctacttagcaagtcctatgatatg
ctggataaagttaatgccttattgccaacagaaaccttcatccctgtaattaggggacta
ataacgaatcagctcccatctgtgagacgtaaggcaatggaccttttgaacaataaggtg
cagcaacgcacgaagtggcagaagagccagatcctgcagctcttagagctagttcccgag
ctcattgctattgcacagtgtaaaagaaaagaggaagaggaggagcaagccatcaacagg
caaactgctttgttcagcctcaagctactctgcaaaggctttggcacagaaaatccagtg
ccgtttgttcctgttctgaaaactgccattgatctgatttcttcagagaaagaggaaaag
aatgtgatgggaagtgctttgctttgtatagctgaggtcacctgtacgctgaaagcccaa
gcaatacctcagcttccaaggctgatgccagcattgttgaagactttaaaaaataagaag
gagctggtttccaatgagatttacttgctgagtgctgtcactgctctgctgaaggttgca
gaaacgttaccacacttccttagcccttatcttctggattgcttgctgcaggttgtccgc
ttggaaaagattgtgctcgagtttggtccttcttcccagataagcttacgtgtatcatca
ttgaaaactatcctagctacaaggcttgctccccgaatactcctgcctgcggttatgaag
tgttacagtgaagtggcaaatacccgaaagaactgcctggttccccttatgaacattttg
aaggagcacattgttagtatggagaaggagcacctgatctcccatcagtctgagctgaca
gcatttttcatgaaagccctggacttccgaacagatcacgcccaggtggatgatttagag
gaagttggtaagacagagactcacattattgattgtctaataagtatggttatgaaactt
tccgaggcttctttcagacccctcttctttaagctctttgattggtccaaaacagagtct
gccctaaaagacagactgctgacattccaccgaatagcagactgcatcgcagacaagctc
aagggcctcttcaccctgtttgctggtcatttattgaagccatttgctgagacactgaac
caggtcaacgtttctaaaactgatgaagctttctttgactccgagaatagcacagagaag
agctgtctgctgttgcagttcaccatgaactgtctgcacaagctcttcctgtttgacacc
cagaagttcctgagtaaggaaagagcagaaaccttgatgatgcctctggttgatcagtta
gaaaatacacttggaggagatgagaagttccaggacagagtgacagcacacctgataccg
tgcatagctcagtttgcagtagcaatggcagatgattctctttggaaaccactgaactac
cagatcctgctgaaaacaaggcacacctctcctaaggtccgatttgctgctctgcttgct
ttggtagaagttgcacaaaaactgaaagagaactacctggtcctgctacctgaatccatt
ccattcttagctgagctcatggaagatgaatgtgaagaagttgaacagctgtgtcagaag
acaattcaacaactagaagtcattttaggagaaccactccaaagctacttctaa
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integrated database retrieval system
