Strigops habroptila (Kakapo): 115613623
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Entry
115613623 CDS
T08851
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115613623 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shab03400
]
115613623 (MSH2)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115613623 (MSH2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
DUF6437
Motif
Other DBs
NCBI-GeneID:
115613623
NCBI-ProteinID:
XP_030355197
UniProt:
A0A672URH9
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Position
10:complement(33397561..33447909)
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AA seq
945 aa
AA seq
DB search
MAGGGSMAAAAVEPPRDAVWPEGAGVEAGFVRAVLSLPEKPDTTVRFFERGDYYTVHGAD
ARLAARELFRTRAVIRQLAGTPGTQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAG
SKSVKENDWYLAYKGSPGNLAQFEEVLFANNDMSMAIGVVGVKLSTTDGQRVVGVGYVDT
TLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRK
KADFTTKDIVQDLNRLLKSKKQEQMNSAALPEMEKQVAVSSLSAIIKFLELLADESNFGQ
FELTTFDLSQYMVLDNAAVQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQ
PLMDKNRIEERLNLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMY
QAINQLPNVVQALEKHEGAHQMLLLAVFITPLNDIYSDFSKFLEMIETTLDMDKVENHEF
LVKASFDPNLTELREKMNELEEKMQSLLKSAAKELGLEAGKSIKLETNSQFGHHFRITCK
EEKVLRNNSKYEIVDTQKNGVKFTNSKLSSINDEYIKNREEYEEAQDAIVKEIINIASGY
AEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYIRPVILEKGQGRIVLKGARHPCIEVQDEV
AFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDAAEVTIVDCI
LARVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISE
YIASKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDNTLTMLYRVKEGVCDQSFGI
HVAELAAFPKHVIESAREKALELEEFQNIGKSRESEGEPPAKKFCREREEGEKIIQDFLC
QVKALPLTDMSEDDIKIKLKQLRNDVLAKNNSFVNEIISRTKATS
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcggcagcatggcggcggcagcggtggagccgccgcgggacgcggtgtgg
ccggagggcgcgggggtcgaggcgggcttcgtgcgggccgtgctctcgctgcccgagaag
cccgataccaccgtgcgcttcttcgagcgcggcgactactacacggtgcacggcgcggac
gcgcggctggccgcccgcgagctcttccgcacccgcgccgtcatccgccagctggcgggg
acaccgggaactcagaagcttgagagtgttgtgcttagtaaaatgaactttgaatctttt
gtgagagatctgcttctggttcgtcattacagagttgaagtttacaagaacaaagcaggg
agtaaatctgtcaaagaaaatgactggtatttagcatacaagggttctccaggaaatctt
gcccagtttgaggaagttctctttgccaacaatgatatgtcaatggccattggtgtcgtg
ggggtcaagctgtctactactgatggacaaagagtagtaggagtgggctatgttgatact
acgctgaggaaactgagtgtctgtgagtttccagataatgatcagttctcaaaccttgaa
gctttactggttcagctaggaccgaaggagtgtgtgctaccaggaggagagactgcagga
gagatgggaaaactacgacaagtcattcagaggggaggaatcttgattacagacaggaag
aaggctgatttcacaacaaaagatattgttcaggatctcaatcgcttgttaaaatcaaag
aagcaagaacaaatgaatagtgcagccctgccagagatggaaaagcaggttgctgtttcg
tctttgtctgccattatcaagtttttagagttgctggcagatgagtctaattttggacaa
tttgaactgactacttttgatcttagtcaatatatggttctagataatgcagctgttcaa
gccctcaaccttttccagagttctgtggaaaatgctaatactgcacagtctctagctggt
ttattaaacaaatgcagaacccctcaaggacaaagattagttaatcagtggatcaagcaa
ccacttatggacaagaatagaattgaagaaaggttgaatttggttgaagcttttgtggtg
gatccagaactacgtcagtgccttcaagaagatctcttacgtcgcttcccagatcttaac
cggctggcgaagaaatttcagagacaagcagcaaacttacaggactgttaccgaatgtat
caggctattaatcaactgcctaatgtggtacaagcactagaaaaacacgaaggagctcac
cagatgttgttgttggcagtgtttataacacctcttaatgatatctactctgacttttca
aagtttctggagatgatagaaacaacattggacatggataaggtggagaatcatgaattt
cttgtcaaggcttcttttgatcctaatttgacagaattaagagagaagatgaatgaactg
gaagaaaaaatgcagtccttgttaaaaagtgcagcaaaagaactaggtttggaagctggc
aagagtatcaaactggaaacaaattcacagtttggacatcactttcgaataacttgcaag
gaggaaaaggttctccgtaacaattcaaaatatgaaatagttgatacacagaagaatggc
gtgaaatttactaacagcaaactgagctccatcaatgatgaatatataaagaacagagaa
gagtatgaagaggctcaggatgcaattgttaaggaaatcattaacattgcttcaggttat
gcagaaccaatacagacgatgaatgatgtgatagcccaattagatgcaattgtcagtttt
gctcatgtgtcaaatggagcaccagtgccgtatatccgtcctgtcattctggaaaaggga
caaggaaggattgtgctgaaaggtgccagacatccttgcatcgaagtacaagatgaggtg
gccttcatccccaatgatgttacatttgagaagggcaagcagatgttccacattattact
ggcccgaacatgggcggaaaatcaacatacatccgacagacaggggtgattgttcttatg
gctcagattgggtgttttgtaccatgtgatgctgcagaagtaaccatcgtggattgtatc
ctggctcgcgtgggagctggagacagtcagctgaaaggcgtgtctacttttatggctgaa
atgttagaaactgcttcaatccttaggacagcatctgaaaactcgctgataatcattgat
gagctgggaagaggaacttctacctacgatggctttggcttagcatgggctatttcagaa
tacattgctagcaaaatctgtgctttctgtatgtttgctacacattttcatgaactgaca
gctcttgctgaccaagtgccaacagtaaataacctacatgttaccgctctgaccagtgac
aacacgctgacgatgctttatcgtgtcaaggaaggtgtttgtgaccagagttttggaata
catgtagcagagttggcggctttcccaaaacatgtgatagaaagtgcaagagagaaagca
ttggaactggaggagtttcaaaacattggcaagtccagggaatctgaaggagaaccacca
gccaagaaattctgcagagaaagagaggaaggtgaaaagataattcaggattttctttgt
caagtgaaagcattgcccctgacagatatgtcagaagacgacatcaaaatcaagctgaaa
caactgagaaatgatgtgttggcaaaaaacaacagttttgtgaatgaaataatttctcga
acaaaagctacatcatga
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