Strigops habroptila (Kakapo): 115613626
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Entry
115613626 CDS
T08851
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04517
IgSF CAM signaling
shab04520
Adherens junction
shab04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115613626 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115613626 (AFDN)
04530 Tight junction
115613626 (AFDN)
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
PDZ_2
RA_2
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
115613626
NCBI-ProteinID:
XP_030355205
LinkDB
All DBs
Position
10:11603504..11717926
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AA seq
1920 aa
AA seq
DB search
MSGGGGSREEERRKLADIINHWNANRLDLFEISDPTEDLEFHGVMRFYFQDKAAGNFATK
CIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNW
NKDDREGRFVLKNENDTLPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRREKEAL
RQASDKDDRLLHGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEF
RSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVVEALEKYGLEKENPKDYCI
ARVTLPPGAQHSDDKGAKETILDDDECPLQIFREWPSDKGILVFQLKRRPPDYIPKKSKK
ITDGKPLKGKERVDGSGYGSCLPPEKLPYLVELSPGRRNHFAYYNYHAYEDGSDSRDKPK
LYRLQLSVTEVGTEKFDENSIQLFGPGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRI
SETTMLQSGMKVQFGSSHVFKFVDPTQDHIISKRPVDASLMVKGPRHKTGAVQETTFDLE
GDVHSGTALPASKSTSRLDGDRTSSASSTAERGMVKPMVRIEQQQDYRRQESRSQDTHGP
ELILPASIEFRESSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDITPA
ERTHKVIAIVNKMVNMMEGVIQKQKNIAGALAFWMANASELLNFIKQDRDLSRITVDAQD
VLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENNPQRPKIDDVLHTLTGAMSLLRRCR
VNAALTIQLFSQLFHFINMWLFNRLVTAPDSGLCSHYWGAIVRQQLGHIEAWAEKQGLEL
AADCHLSRIVQATTLLTMDKYSHADVPNINSTCFKLNSLQLQALLQNYHCAPDEPLIPTE
LIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNVPSGLQEFLD
PLCQRGFCRLTPHPRSPGTWTIYFEGADYESHLSHENAELAQPLRKEPEIITVTLKKQNG
MGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAEL
MTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFELYNNSTQ
NGSPESPQLPWTEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKNAYASGTTTKI
TSVSTGNLCTEEQTLPPRPEAYPIPTQTYTREYFTFPASKSQDRMGPAQSQWPNYEEKPQ
VQAESNHSINTTMQRVARSQEELRDKVFQPEKNRLEVVIRKDVEYIDRKSDSDQWMNSSV
DSSTSSQEHLNHLAKPVSPGSCLTKSGPGRWKTPAASQPTPVAISQPIRTDLPPPPPPPP
VHYAAEFDELQMDLPLPPPPPPNQVGAQASSQVAAAERKKREEHQRWYEKEKARLEEERE
RKRREQERKLGQMRSQPLIPAQPVVPPVSLQQVKSEKPSTLQRPQETVIRELQPQQQPRT
IERRDLQYITISKEELSSSDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQNKPDR
TAEENDRLRKLMLEWQFQKRLQESKQKDEDDDEEEDDDVDTMLIMQRLEAERRARQTAVP
AISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERTRREAEEKRRQEEEYY
SRLEAERRRQHDEAERRLLEPDEPGLYRPPLPREYELPSPTPSSNAPPPPPQRNTSYLKT
QVLSPDTIYTAKFVAYNDDDEEEEDSNLAGQDKYSSTRKSYGDFPPATLKPQQPSRQPRP
VSDGLFLSNSFQSSPVNANSTTAKKSQPLPPPNKPSVIHASSSKGINSYTGSTGAAVGAH
EVYRDPRDKRSKSQDTDLPGAPENLTFRERQRLFSQGQDVSNKVKASRKLMELENELNTK
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcggcggtagccgggaggaggagcggcgcaaactcgccgacatcatcaac
cactggaacgcgaaccggctggacctgttcgagatcagcgaccccaccgaggatctagag
tttcatggagtaatgagattctactttcaagacaaagcagctggaaattttgcaacaaaa
tgtatccgtgtgtctagtacagccacaactcaagatgtgatagaaactcttgcagagaag
tttcgaccagacatgcgaatgttgtcatcccctaagtactctctttacgaggtgcacgtc
agtggagaagaaagaagattagatgtggatgagaagcctcttgttgtacaattaaactgg
aacaaagatgatcgagagggaagatttgttctcaagaatgaaaatgatacacttcctcca
aagaaggcccagagtaatggccctgaaaaacaagaaaaagagggagtaattcagaatttc
aaacgaactctctcaaaaaaagaaaaaaaagaaaagaagaggcgtgaaaaagaggctttg
cgacaagcatcagataaagatgatagacttcttcatggggatgatattgagaattctcgc
cttgcagctgaggtttacaaagatatgcctgagaccagcttcactcgcacaatatcgaat
cccgaggtggttatgaaacggcggcgacagcaaaaactagagaagagaatgcaggaattt
cgcagttctgatggcagaccagactcaggtgggacactgagaatttatgcagacagttta
aaaccaaatataccatacaagacaatcctgctgtccactacagatactgcagactttgca
gttgttgaagcactggaaaaatatggtctggagaaggaaaacccaaaggattattgcatt
gctcgtgtcacgctgcctcctggtgctcagcactctgatgataaaggtgctaaagaaact
attcttgatgatgatgagtgtccactgcagatattcagggagtggcctagtgataaagga
atactagtcttccagttgaaaaggcggcctcctgattatatcccaaagaaatccaagaaa
ataactgatggaaagccattaaaggggaaggaaagagttgacgggtctggctatggctct
tgccttcctcctgagaaactaccatacctggtagaattaagcccagggagaaggaatcac
tttgcctactacaactatcacgcttatgaagatggttctgactccagagataagccaaag
ctctatcgtctacaattaagtgtaaccgaagttggaactgaaaaatttgatgaaaattcc
attcagttatttggtccaggaattcagcctcatcactgtgacctcactaatatggatgga
gttgtcactgtaaccccaagaagcattgatgccgaaacctatgtggaaggtcagcgtatt
tcagaaaccactatgctgcaaagtggaatgaaggtgcagtttgggtcatctcatgtattt
aagtttgtggatcccactcaggaccatattatttctaaaagacctgttgatgcaagtctt
atggtcaaaggtcccagacacaaaactggagctgttcaggaaactacatttgatctggag
ggagatgttcacagtggaacagcattaccagcaagcaagagcaccagcaggcttgatggt
gacaggacatcatcagcatccagcacagccgaacgagggatggtgaagccgatggttaga
atagaacagcagcaagattaccgcagacaggaaagcagatctcaggatacccatggacca
gaactgatactacctgccagtattgaattcagggaaagctctgaagatgcctttttatct
gccattataaattacacaaatagctcgacagttcattttaagctgtcacctacttatgtt
ttgtatatgacatgtcggtatgtattgtcaagccagtacagacctgacatcactcctgct
gagcgtactcataaagtcattgcaatagtcaacaagatggtgaacatgatggaaggagtt
atacagaaacagaagaacattgccggggcacttgccttttggatggcaaatgcatctgaa
ttattgaatttcataaagcaagacagagatcttagccgaattactgtggatgcacaagat
gttttagcacacttggttcaaatggcattcaagtacctggttcattgtctgcaatcagag
cttaataactacatgccagcattccttgatgatccagaggaaaataatcctcagaggcct
aagatagatgatgtgctgcatacattgactggagctatgtccctgttgcggcgatgtaga
gtgaatgctgctctaaccatacagctcttctcccagttgtttcacttcatcaacatgtgg
ctttttaacagactagttacggcaccagattcagggttatgttcacattactggggagct
attgttcgtcaacagttgggccacattgaagcctgggcggaaaaacagggtttagaattg
gctgctgattgccacctgagcagaatagtgcaggcaaccacattgcttaccatggacaaa
tattcccatgcagatgttccaaatattaacagtacttgctttaagctgaattctctgcag
ctacaagctttgttgcagaattatcactgtgctccagatgaaccactcatcccaacagaa
ttgatagagaatgtagtaactgttgcagaaaatacagctgatgaacttgctcgcagtgat
ggccgagaagtccaactggaagaggatcctgacttacagctaccttttcttttaccagaa
gatggctattcctgtgatgttgtcagaaatgttccaagtggtttacaagaatttttagat
ccactctgtcagagaggtttttgtagactaacacctcatccacggtcacccggcacatgg
acaatatactttgaaggtgcagactatgaaagtcacctgtcacatgagaatgctgagcta
gctcagcctttgaggaaagaacctgaaattatcactgtaacactaaaaaaacaaaatgga
atgggcctcagcattgttgctgccaagggtgctggtcaagacaaacttggaatatatgtc
aagtctgttgtgaagggaggtgctgcagacgtggatggtcgtctggctgcaggggatcag
ttgctcagtgtggatggtcgaagtttggtgggcctgtcccaggaaagggcagcagaactt
atgactaggacaggttctgtagtaacactagaagtagcaaaacaaggagcaatttaccat
ggtcttgcaaccctgcttaatcagccatccccaatgatgcaaagagtttctgaccgccgt
ggctcaggtaaacctcgaccaaagagtgaagggtttgagctgtacaacaactccactcaa
aatgggtcacctgagagtcctcagctgccgtggacagagtacagtgaaccaaagaagctg
ccaggggatgatagattaatgaagaacagagccgatcatcgctccagccccaatgtagca
aatcagcctccaagccccgggggaaagaatgcttatgcatctggaactaccaccaaaata
acctcagtctccactggaaatctttgtacagaggaacagactctgcccccacgacctgaa
gcttatcccatcccaacacagacgtatactagggaatatttcacattcccagcttcaaag
tcccaggatcgaatgggtccagctcagagtcagtggccaaattatgaagaaaaaccacag
gtccaggcagaaagtaatcattcaatcaatactacaatgcagcgtgtagctcgttcccag
gaagaactccgagataaagttttccagccagagaagaatcgtttggaagttgttatacgg
aaggatgtagagtacatcgatcggaagtcagacagcgatcaatggatgaattcatctgtg
gattctagcacatctagccaagaacacctgaaccatttagccaaaccagtctctcctggt
tcttgtttaactaaaagtggacctggccgttggaaaactccagccgccagccagccgact
ccagtggccatttcccagcccatcagaacagatctgccccctccaccaccgcctcctcca
gtgcattatgcagctgaatttgatgaactacagatggatttgcctctgcctccccctcct
cctccaaatcaggtaggagcacaagcatcctcccaggtagctgctgctgagcgtaaaaaa
agagaagagcatcagaggtggtatgaaaaggaaaaggcacgtttggaagaagaacgagaa
aggaaacgtcgtgagcaggagagaaaactgggccagatgcgttctcagccactaattcct
gctcagccggtggttcctcctgtttcccttcaacaagtgaaatcagaaaaaccttcaact
ttgcagaggcctcaagaaacagtcattcgagagctgcagccccaacagcagcctcggact
attgagcggagagatctgcagtacatcactatcagcaaggaagaactgtcctctagtgac
agcctctctcccgatccctggaaacgggatgctaaggagaagctggagaagcagcaacag
atgcacattgtggacatgctgagtaaagagattcaggaacttcagaacaagcctgatcgt
acagcagaagaaaacgaccgtctccgcaagctcatgcttgagtggcagttccaaaagcga
cttcaagaatcaaagcaaaaggatgaagatgatgatgaagaggaggatgatgatgtggat
actatgctcatcatgcagcgactggaggcagaaagaagagcaaggcagactgctgtgcca
gcaatctctgttctagatttgttacaggatgaagagcgcagacggcagcagcagttggaa
gaaatgcgcaaacgggaagcagaagacagggccaggcaggaagaagagcgccgacagcaa
gaggaggagcggaccaggagagaggctgaagaaaagaggcgacaggaagaggagtattac
agtcgcttagaggctgaaaggcgcaggcagcacgatgaagcagaacgaagattactggag
cctgacgagcctggtctgtacagacctccgcttccacgggaatatgaactcccatcccca
accccttcatctaacgctcctcctcccccacctcagcgaaacacctcttacctcaaaaca
caggtcctctcccctgacacgatttatactgccaagtttgttgcatacaatgatgatgat
gaggaggaggaggattccaatctagcaggtcaggataagtactccagcacaagaaaatct
tatggtgactttcctcctgccacccttaagccacagcagccctcccgccagcctcgccca
gtttcagatggcctctttctttccaactcattccagtcatctccagtcaatgccaacagt
actactgccaaaaaaagccagcccctgcccccaccaaacaaaccgagtgtcatccatgcc
agcagctctaaaggaataaattcatacactggatctacaggagcagctgttggggcccat
gaagtctatcgggatccaagagacaaacgatctaaaagtcaagatacagatttacctgga
gcaccagaaaacttgacgttcagggaacgccagcgacttttttcacagggtcaggatgta
tccaataaagtaaaagcttctaggaaattaatggaactggaaaatgagttgaacacaaaa
taa
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