Strigops habroptila (Kakapo): 115613656
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Entry
115613656 CDS
T08851
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115613656 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115613656 (POLR1B)
Enzymes [BR:
shab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115613656 (POLR1B)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115613656 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
115613656
NCBI-ProteinID:
XP_030355302
LinkDB
All DBs
Position
10:complement(30314217..30332843)
Genome browser
AA seq
1123 aa
AA seq
DB search
MAGLGGTDPHRLRPRPAARSAARRDLTSAHIESFNYAVSEGVYRAVQDLPPLEFALKGSR
VSLTVAGVSIAPPAVPAGTVCQERRVFPAECRGLRSTYRGRIAADISWSVNDMPEGTIKH
PLGYIPIMVKSKLCNLYNLSPQELMQHHEEEEEMGGYFIINGLEKVVRMLIMPRRNFPLA
MTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFQKELFFLPLGFA
LKALVNFPDYQIFEELVKGKEDDTFYVNCVTEMMRAVVDAGCYTQQNVLEYLGKSFRIKL
NLPEWYSNEQAAAFILNKCICIHLTNRTEKFYLLCMMTRKLYAFAKGECMEDNPDSLMNQ
EVLTPGQLFLMFLKERLESWLQSVKFVLEKRAEKADVSINADSLVKAFSLATDFTKPFEY
LLATGNLRSKTGLGMLQDSGLCVVGDKLNFVRYLSHFRCVHRGAAFSQMRTTTVRKLLPE
SWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVPVRDIPPLLCSLGVTPLDATPSKPYAE
CYRVVLDGSVVGWVEWDLAPEIAETLHRFKITQEKRFPARAEVVLIPMTGKPSLYPGLFI
FTTPCRMVRPVRNLFYGRNEWIGTLEQIFMNVATIESEVVPGITTHQELFPHSILSVVAN
LIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRPSMYDYYGM
DSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKMESIDLSLKASRAGDNL
VFGIRPGDPNVSEKLDGDGLPFVGSILQPGDPFYSFMNLNTGETFTVYYSSKEVGIVDNV
RLCSNDRGTGKFKKACITVRVPRNPTIGDKFASRHGQKGILSQLWPVEDMPFTENGMVPD
ILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKNSALKYFGETLVSAGYN
FFGTEKMYSGISGLELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQPVKGRNVE
GGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSIAYVCTSCGSMTSPVLEKQPHFSSMPS
SRRYSCSICSEVDAIEVVPVPHVFRYFVAELAAMNIKTKLNVK
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctcggcgggacggacccgcacaggctgcggccgaggccggcggcgcgcagc
gcggcgcggcgggacctcaccagcgcccacatcgagtccttcaactacgccgtcagcgag
ggcgtgtaccgcgccgtgcaggatctgccgccgctggagttcgcgctgaagggcagccgg
gtgtcgctgaccgtggccggggtgtccatcgccccccccgccgtgcccgctgggaccgtg
tgccaggagaggagagtgttccccgccgagtgccgcggcctccgcagcacctaccgcggc
aggatcgctgctgacatcagctggtcagtgaacgacatgccagaagggacaatcaaacat
cctctggggtatattccaatcatggtgaagtccaaactatgcaacctctataatctttct
ccacaagagctcatgcagcaccatgaggaggaagaggaaatgggaggttactttataatt
aatggcttagaaaaggttgttaggatgctgattatgcccaggcgaaacttccctcttgca
atgacaagacacaaatggaagaacagaggccctggtttcacagagtacggagtggtgatg
cactgtgttaaggatgagcacactgcaataaatatgaaccttcactacttggaaaacggt
tgtgtcatggtaaacttcatttttcagaaagagttgttcttccttcccttaggatttgct
ctgaaggcattagttaatttcccagactaccagatttttgaagagttggtcaaaggaaag
gaagatgacaccttttatgtgaactgtgttacggagatgatgagagcagtggtggatgca
ggctgttatacacagcagaatgtcctcgaatacctgggaaagagcttcagaataaaactc
aaccttcctgagtggtacagcaatgaacaggctgcagctttcattttgaacaagtgtatt
tgcatccacctgacaaacagaacagaaaagttctacctgctctgtatgatgacccggaag
ctgtatgcctttgccaaaggggagtgcatggaggataatccagacagtctgatgaaccaa
gaagtgcttaccccaggacagcttttccttatgttcttgaaggagaggcttgaaagctgg
ctgcaatctgttaaattcgttctggagaaaagagcagaaaaggctgatgtcagcataaac
gcagacagcttggtgaaggctttcagcctggccacggactttaccaagccctttgaatac
ctgcttgcaactggtaacctgcgatctaaaactggcctgggcatgttacaggacagcggc
ctgtgcgtggtgggagacaagctgaactttgtccggtacctctcccacttccgctgcgta
cacagaggagccgcgttctcccagatgagaactaccactgtccgcaagctgctgcccgag
tcctggggcttcctgtgtcctgtggacaccccagatggagaaccctgcgggctcatgaac
cacatgacagctctgtgtgaaatagtgaccgagatggtgcctgtgagggacatcccacct
ttgttgtgttccctgggtgtcacccccctggatgcgactccaagcaagccttacgctgag
tgctacagagttgtgttggatggctctgtggtgggctgggtagagtgggacctggctcct
gagatcgcagaaaccctccaccggttcaagataacacaagagaagagatttcctgcgcgg
gcagaagtggtccttatcccaatgacaggaaaacccagcctgtatcctgggttgttcatt
tttactaccccttgccggatggtgcggcctgtcagaaacctgttctatggaaggaatgaa
tggattggtactttggaacagatcttcatgaacgtggccacgatagagtcggaggtggta
cctggaataaccactcaccaggagctcttccctcacagcattctgagtgtggtggccaac
ctcattcccttctctgaccacaaccaaagtccacggaacatgtaccagtgccagatggga
aagcaaaccatggggtttccagtttataactacaaggatcgctcggataacaagctgtac
caccttcacactccccagagccctctggtgcggcccagcatgtatgactattacgggatg
gacagctatccagttggcaccaattcaattgtggctgtcatctcctacagtggctatgac
atggaagatgcgatgattgtgaacaaatcttcctggcagagagggtttgcctatggaagc
gttatcaagatggagagcattgacctttcccttaaagccagtagggcaggcgataattta
gtctttggcatcaggcctggtgacccgaatgtctcagagaagttggatggtgatggactt
ccttttgttggctccatcctacagcctggggaccccttctacagcttcatgaacctcaac
acaggggagaccttcactgtgtactattcgagtaaggaagtcggcattgtggacaacgtc
aggttatgcagcaacgaccgtggcactgggaagttcaagaaggcttgtatcaccgtgagg
gttccccggaatccaaccatcggagacaaatttgccagccgtcacggacagaaaggtatc
ctgagccagctctggccagtggaggacatgcccttcacagagaacgggatggttccagac
atcctcttcaaccctcacggctttccctcccgcatgaccattgggatgttaatcgagagc
atggcggggaagtcagcggcgctgcacggcgtctcctacgacgccactcccttcaccttc
acagagaagaattctgccctgaagtacttcggtgagactttagtgagtgctggttataac
ttctttgggacagaaaagatgtacagtggcatcagcggcctggagctggaggcagagatc
tttgtgggagtggtttattaccagcgcctgcgccacatggtctcggacaagttccaggtg
aggacaacggggccccgagatgctgtcaccaaccagcccgtcaaggggaggaacgtggaa
ggtgggattcgcttcggtgagatggaacgagatgctttgctggctcatggcacctccttc
ttgctgcaagaccggctgttcaactgctccgatggctccatcgcctatgtgtgcacgagc
tgcggcagcatgacatctcccgtgctggagaaacagccccacttctcctccatgccaagc
agcaggaggtactcctgctccatctgcagcgaggtggatgccattgaggttgtcccggtg
ccccacgtcttccggtacttcgtggcagagctggcagccatgaacataaaaacaaagctc
aatgtgaagtag
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integrated database retrieval system
