Strigops habroptila (Kakapo): 115613669
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Entry
115613669 CDS
T08851
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115613669 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115613669 (PEX1)
Membrane trafficking [BR:
shab04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
115613669 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
nSTAND3
AAA_14
RNA_helicase
RuvB_N
AAA_5
DUF815
TIP49
AAA_22
AAA_28
NACHT
ABC_tran
AAA_33
AAA_18
Sigma54_activat
AAA_29
Sigma54_activ_2
AAA_19
AAA_2
AAA_7
Bac_DnaA
CoaE
APS_kinase
Nup54_57_C
DUF87
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
115613669
NCBI-ProteinID:
XP_030355788
LinkDB
All DBs
Position
1:complement(121624737..121660210)
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AA seq
1296 aa
AA seq
DB search
MWGSGNPGGGGAGAAAVTVVLSRTRDCFLHLPPVLASYLRLQQGQAVKVSCGHQPVFLSW
MEIRHRGHQGENIAEINRLLAEKLGITDGEQVFIEPCSHVSSCQQVEVEPLSADDWEILE
LHASSLEKHLLDQIRIVFPKAVFPVWVEQHTHVYIKIGKLMPAAPYGRLEPCTELLVCPK
PHEPEENITSTPSKESDLLLRSFVENNMEQEAALKDPFGKQPYLKPGVLEQSKADADMTV
GSNVLPNIWNFLGSIFSHTSEQKQKTLCDKDETSTFKDKLLNIIHMDSIFRVCQSQPPSV
QNASATHPFLKCNAIHIFPWNLEFIDLDPNPVVSYGKINELLSPRQRHQEAKQNLPFEKQ
KHLASMQDKSHSDSSEAFREGSVVQIVWNGFEDLKSVIEYGHIGEALHVGRVWIPDGLRK
KLHIEIHSTVRIKSIESIPKIPVSLTLQPKENLHTDIHEDDIKSAFSSWLQDSTTDDHPW
IMTSTDCIHLSVKDGMEEFVLSVVHPAHMEENKSENIFILSPSLLQKTNIQVLLHPVTGK
ADGDSQPPACDTHKNLPYYKLNDLGGVEKLGASSFEHISHSLLGRPLSQKLAAIAVGLRS
GGVLLTGGKGSGKSTLAKAICKEAFNRLDAHVEVIDCKALRGKRLVNIRKNVEEAFLEAA
WRQPSILLMDDLDHIVGVPSTPEHENSPETIQSNRLAYVLKDLIKEVISMGSLIALIATS
QSEHSLHPSLVSAQGTHIFQCFRCIRPPDQKQRCEMLYSIIKRRLNSDISKFSDLDLQCI
AKETEGFVARDFTMLVDRAIHACVSNQNAFQSDAELILSTVDFQKALKDFTPLALRNVNL
HKPKDIGWERIGGLKDVKQILKDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLA
GVVARESGMNFISIKGPELLSKYIGASEQAVRDIFDRAQAAKPCIVFFDEFDSVAPRRGH
DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQN
SRYEILKALSHSLSLANDVDFQDLAAKTEWFTGADLKALLYNAQLEAIHTNLGSGSTQDF
VSSSDSDFSLSSMVFLNHSSGSDDSAIDGEAGLEHSLISLDMSDLLPEDPRSNMYRLYFG
SSYESELGNGTPSELSSLCLSGPNSITHDFTSVTHRDAASSQPSMLRTASQEDSLEHNQE
QQIEHLRTEVNAIKTNYRNKNGVWQEDSTLNQSVQAKNTLVITQSHLMAALEGIRPSISQ
DDWKNFTELYDNFQNPKKRRGQVGSTFRPGQKMTLA
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcagcggcaatcccggcggagggggagctggagccgccgcggtgacggtcgtc
ttgagcaggacccgggactgcttcctgcacttgcctcccgtgctagcctcttacctccgc
ctacagcagggccaagctgtgaaagtgtcttgtggtcatcagcctgtatttttgagctgg
atggaaatcaggcatcgaggtcaccagggtgaaaatattgcagagattaacagactgtta
gcagagaaacttggcattacagatggagaacaggtatttattgaaccctgttcccacgtc
tcctcctgccagcaagtagaagtagaaccactctccgcagatgattgggaaattctggaa
ctgcatgcttcctctcttgaaaaacatcttcttgaccagattcgaatagtatttccaaaa
gccgtctttcctgtgtgggttgaacagcacactcacgtttacattaaaatcggtaagctt
atgccagcagccccctatgggagattagaaccgtgcacggagcttctggtatgtcccaaa
ccacatgaacctgaggaaaatatcaccagcacgccttccaaggaaagtgacctcttgctc
agaagttttgtggaaaataacatggagcaagaagcagcactaaaggatccttttggcaaa
caaccttacttaaagccaggagtccttgaacagagtaaggctgatgcagacatgacggtt
ggctcaaatgttctcccaaatatatggaatttcctagggagcattttctctcatacatct
gagcagaaacaaaagactttgtgtgataaagatgaaacaagcaccttcaaagacaagctg
ctgaacataattcacatggattccatttttagagtatgtcagtcccaaccacccagcgta
cagaatgcatccgccactcatccgtttctgaaatgcaatgctattcatatttttccatgg
aatttagaatttattgatttggatccaaatcctgtagtatcttatgggaaaattaatgag
ctgctttccccaagacagcgtcatcaagaagcaaagcaaaatctgccatttgaaaagcaa
aagcatttggctagtatgcaagacaaaagtcattctgatagcagtgaagcattccgtgag
ggatctgttgttcaaatcgtttggaatggatttgaagacctaaagagtgtcatagagtat
ggccacattggggaagccctacatgttggaagagtttggattccagatggtctgagaaaa
aaactacatatcgaaatacattcaacagtccgaattaagtcgattgaatctattcctaaa
atccctgtatctcttacattgcaacccaaagagaacttgcatacagatatacatgaagat
gatattaaatctgctttcagttcttggctgcaggattccactaccgatgatcacccatgg
ataatgacaagtacagactgtatacatctgtctgttaaagacggaatggaggagtttgtc
cttagtgtagtgcatcctgcgcacatggaagaaaataagtctgagaatatttttatactg
agtcccagtttgctgcaaaagactaatatacaagttcttttacatcctgtgacgggaaaa
gctgatggtgatagccagccacctgcatgtgatacacataagaaccttccctactacaaa
ctaaatgatttaggaggagtggagaaattaggagcatcttcatttgaacacataagccac
agtcttctggggcgtcctttatctcaaaagttggctgctattgctgtgggactgcgaagt
ggaggggtgcttctcacaggaggaaagggaagtggaaagtcaacattagcaaaggctatc
tgcaaagaggcattcaatagactggatgctcacgtagaagtaattgattgtaaagcttta
agaggaaaaagattagtaaacataaggaaaaatgtggaagaagcttttttagaggcagct
tggagacaaccatccattcttttgatggatgatcttgatcacattgttggagtaccttct
acaccagagcatgagaacagccctgaaaccattcaaagcaacagacttgcttatgttttg
aaagatctgataaaagaagttatttccatggggagcttgattgcattaattgccacgagt
cagtctgaacattccctacatccttccctggtttcagctcaaggaactcatatatttcaa
tgcttcagatgtatccgacctccagatcagaagcaaagatgcgaaatgctgtattccata
ataaaaagaagactgaattctgatataagcaagttctctgatcttgacctccagtgtatt
gcaaaggaaacggaaggttttgttgctagagattttactatgctggttgatcgtgccatt
catgcctgtgtttccaaccagaatgcatttcaaagtgatgcagaattgattttgtcaact
gtggattttcagaaagctctaaaagattttactccattagctctgagaaatgttaacctt
cataaacctaaagacattggatgggagaggattggtggcttaaaagatgtgaaacaaatt
ctcaaggataccatcatgttacctgcaaagtatccagaattatttgcaaacctgcccata
cgacagagatcaggagtcttgctatatggagcacctggaacaggaaaaacactgttagca
ggagtagttgctcgagagagtggcatgaatttcatcagcatcaagggaccagagctgctc
agcaaatacattggagcaagcgagcaagcagttcgagacatctttgacagagctcaggca
gctaagccttgtattgttttcttcgatgagtttgattctgtagctcctcgccgaggtcat
gacaacacaggagttactgacagagtggttaaccaactgttgactcagttagatggtgtg
gaaggcttacaaggggtttatgtgctagctgctactagtcgcccagatttgattgaccct
gctttgttaaggccaggtcgactggataagtgcctgtactgtccacctcctgatcagaat
tcacgctatgaaatcttaaaagctctcagtcattccctgtccttggcaaacgatgtggac
tttcaggatttggcagcaaaaacagaatggttcacaggggctgacctaaaagctttattg
tacaatgcccaattagaggcaatccatactaatttaggttcaggttcaacacaggatttt
gtttctagttctgatagtgacttcagtctctcttccatggtttttctaaaccacagcagt
ggctcagatgattcagcaatagacggagaagcaggactggaacattctcttatttcttta
gacatgtctgacttgcttcctgaagatccaaggtccaacatgtatcgtctttattttgga
agctcttatgaatcagagctgggaaatggaactccttcagaactgagctctttgtgtttg
tctggaccaaactccataactcatgattttaccagcgtgactcatagagacgcagcatca
tcacaaccctcaatgcttagaacagcttctcaagaagactccctggaacataaccaggag
cagcaaatagagcacctgaggacagaagtcaatgctatcaaaaccaactacagaaacaag
aatggagtatggcaggaggacagcaccctgaatcagtcagtgcaggccaagaacacttta
gttattacccagtcccatctgatggctgcacttgagggtataagaccatccattagccaa
gatgactggaagaactttactgaactgtatgataattttcagaatcccaagaagaggaga
gggcaagttggctcaactttcagaccaggacaaaagatgactctagcatag
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