Strigops habroptila (Kakapo): 115613718
Help
Entry
115613718 CDS
T08851
Symbol
VSX1
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115613718 (VSX1)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115613718 (VSX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115613718
NCBI-ProteinID:
XP_030355432
UniProt:
A0A672UN54
LinkDB
All DBs
Position
10:30279561..30284729
Genome browser
AA seq
337 aa
AA seq
DB search
MPGRAEPSGGRGAAAGPVPVAVPVAPAARPGGAGLRAKGFAITDLLGLEAELQPPPGPLP
AAAAGGYEGGGALGLGLLCGLGAPGAPRLLPAPLPLLPARGPRPAAGPPATARRHKENIS
DEDSLCGDGSELKMSTSQIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREMLAVKT
ELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPESIINSAKSGLV
GSCAPWLLGMHKKSMEVSRKVESQEKLADGWRVEQQEEEELKGKQASSQRGSDKLGSAKD
SEDTAIDLSRTAKHEKRGVLRQCMNGDPPMELSNRDH
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgccgggccgggcggagccgtcggggggacgcggggcggcggcggggccagtaccggtg
gccgtaccggtggcaccggcagcacgaccgggcggcgcggggcttcgggccaagggcttc
gcgatcaccgacctgctggggctggaggccgagctgcagccgccccccgggccgctcccc
gccgctgccgccggtggctacgagggcggcggggcgctggggctggggctgctgtgcggg
ctgggggcgcccggagccccgcgcctgctgcccgccccgctgccgctgctgcccgcccgc
ggcccccgcccggccgcggggccgccggccaccgcccgccggcacaaggagaacatctcc
gatgaggacagcctgtgcggggacggcagcgagctgaagatgtccacctcccagatcaag
aggaagaaacgccggcacaggacggtgttcacagctcaccagctggaggagctggagaag
gcattcaatgaagctcactaccctgacgtctatgcccgggagatgctggccgtgaagaca
gagctgccagaggacaggatacaggtttggtttcagaaccgaagagccaagtggcggaag
cgggagaagtgctggggacggagcagcgtgatggctgagtacggcctctacggggccatg
gtgaggcactccatccctctgcccgagtccatcatcaactccgccaagagcgggctggtg
ggatcctgcgccccgtggctgctgggcatgcacaagaagtccatggaggtgagcaggaag
gtggagagccaggagaagctggcagatggctggcgagtggagcagcaggaggaggaggaa
ctcaaagggaagcaggccagttcccagaggggctccgacaagcttggctcagcaaaagat
tcggaggacacagccatcgacctctccaggacagccaagcacgagaagaggggtgtgctg
aggcagtgcatgaatggggacccccccatggagctgagcaacagggaccactga
DBGET
integrated database retrieval system
