Strigops habroptila (Kakapo): 115613739
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Entry
115613739 CDS
T08851
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shab03016
]
115613739 (TARBP1)
03036 Chromosome and associated proteins [BR:
shab03036
]
115613739 (TARBP1)
Enzymes [BR:
shab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
115613739 (TARBP1)
Transfer RNA biogenesis [BR:
shab03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
115613739 (TARBP1)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115613739 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Cut8
Motif
Other DBs
NCBI-GeneID:
115613739
NCBI-ProteinID:
XP_030355492
LinkDB
All DBs
Position
10:complement(15587014..15620746)
Genome browser
AA seq
1580 aa
AA seq
DB search
MEVVLADALLARCGDPCALLRAVCAPLCAERAEALRLLLQRLAAVAPPPGEAEALRRAAW
EVALERCRPLLRGGEAAAAGCGERLRVARAARGALRHCVQLCGAPLAARLACDALAELAA
GGGAGAEAAVEALVAAAPRLEEPALVARCVAAALALVREEGEGEAVAALVAGRLLPALGG
NGTALRYVWDGLLGAGGTPRAGRALLALSALADALLPRGAPGPGLDARLCPRFWRVVQQG
LTERDGLCRKRARYLLKRALDLSGGQRAQLRCPTDGGDESSLFWWSAEENEKLLQFWETY
ILIMETLEGNQIHVIKPVLPKLNSLFEHAISGEGGYWLFHPSWHMCIYKRMFESENKTLT
KEGILHFLELYETKHLPNSLGFSEFVIGPLMDALSESSLYSRTPGQLMGACPPLGMRLQK
FLATYIMLLPGEEKGSFLLKFIQKMTSRHWCAVPVLFLSMALAYIPECKVLGTEGLHALR
DVLQCTMITHQILLRGAAQCCLLQTAMHLTDVEKVSLPEVSSFLLSLRPEESLRRDTMLW
MELCSWLQVNERCFRKPVTSDFEPQETPSLCQYVCNLVGEYLKTPVSERENCFMPDWFEA
KLVATMILLAAEVEQMRNKHSGKSNIEWIELEAFLNPLLDVLMKLGSNAYIPTLKTDKSL
QLLLKLLQTRSLKCSNTQDDGVLFFIWKSLMTPVESILEFALRRLTTNELSTIGDLDRCD
LYLALIPEMVNLCLQVSWKKVPYIKNFILSLTNASIRNLQERNCEEEPKLQEQIKKVASM
ASLTAVCELMDRKPEAHLDSLPSVDALKRFISFSQFNDVLKKPSYIGEESSLCEETTSQG
WGKIVARYVRDQWICLRFVLNSFPTLGQEHKETSEMSLSTVERSRKVLQSALEALTILPS
DQVLPVFDCMKVLVPKLLDSSEPLCIEAFDLAWKIISSLSNTQLIFWSNLKAFVQFIFDT
EVLAVAASAKGQAYAKIKEIIFKLIDMSTTKTGVFNVVLSHCCRSWIFPTVDERSALTNA
FLNAGNYCELITEACVFGTVFRKDQRLIQDVHAFIESLGEKCAANVVTESTNRDDHYVRV
CAIKFLCLLDGSNTLHKTFVEDIFIKLLDKDEQVSRSRTRYYANSLQHRIKNRVWQTLLI
LLPKLDQNFLCGILDKVFQAGFGNNQASVKYFIEWIVIMSLHRYPQFLNKFWDCFCYDEE
KLKTSICTFLSVLSHFDIILQNTSEKKPALKKALIVVLQWCFNHNFSVRLYALVALKKIW
GMCRMLHVEEFEALTPVIESSLQQVENMHGTGNARRNWQRIQDHFFFATFHPLKDYSLET
IFYILPRLSELAEDEWISLSKFDRFTDIPLPPAFQWYHCRTELRDLKPSDWSQQDMGSSS
AETDSQTEWTDVQKKIIPWKNSTPSLDLEMVFQDRAAKLGKSNSRLIVVASLIDKPTNLG
GLCRTSEIFGASALVVGNLHYVQDKQFQHLSVSAEQWLPLVEVKPCQLVDYLQQKKTEGY
TIIGVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVH
VSGALLIWEYTRQQVIKQKQ
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgctggccgacgcgctgctggcgcgctgcggggacccctgcgcgctgttg
cgggctgtctgcgcgccgctctgcgctgagcgcgccgaggcgctgcgtctcctgctccag
cgcctggccgcggtcgcgccgccgccgggggaggccgaggcgctgcgccgggccgcctgg
gaggtggcgctggagcggtgccggccgctgctgcgcggcggggaggcggcggcggcaggg
tgcggggagcggctgcgggtggcgcgggcggcgcggggcgcgctgcggcactgcgtgcag
ctgtgcggggcgccgctggcggcgcggctggcctgcgacgccctggcggagctggcggcg
ggcggcggggcgggcgcggaggcggcggtggaggcgctggtggcggcggcgccgcggctg
gaggagccggcgctggtggcgcggtgcgtggcggcggcgctggcgctggtgcgggaggag
ggtgaaggcgaagcggtcgcggcgctggtggccgggcggctgctgccggcgctgggcggc
aacggcacggccctgcgttatgtctgggatgggctgctgggcgccggcggcaccccgcgg
gccgggcgggcgctgctggccctgagcgccttggccgacgcgctgctgccgcggggcgcg
ccggggccggggctggacgcgcggctgtgcccgcggttctggcgggtggtacagcagggt
ctgaccgagcgggacgggctgtgccggaagcgggcccggtacctgctgaagcgggccctg
gacctcagcggcgggcagcgcgcccagctgcgctgccccacggacggcggagacgaatca
agtctgttctggtggtctgctgaggagaatgagaagctcctacagttttgggaaacttat
atcttgataatggaaactttggaaggaaaccagatccatgtcataaagccggtattacca
aaactaaacagtttgtttgagcatgctatatcaggggaaggaggttattggttgtttcac
ccatcatggcacatgtgcatttataaacgaatgtttgagagtgagaataaaacattgaca
aaggagggcattcttcattttctggagctttatgaaacaaagcatcttcccaattcactt
ggtttttcagagttcgttattggaccattaatggatgccctctctgaaagttccctctat
agcaggacaccaggtcagttaatgggagcctgtcctcctttgggaatgaggctacagaag
tttttggctacttacatcatgcttcttccaggggaagaaaaaggtagcttcctgttgaaa
tttattcagaagatgacaagtaggcattggtgtgctgttcccgttttgtttctttctatg
gctctggcatatatccctgagtgtaaagtactgggtactgaaggacttcatgctttgaga
gatgtcctccagtgcactatgattacacatcagattttgttgcgtggagctgcacagtgc
tgtcttcttcaaacggctatgcatttgacagatgtggagaaagtgtccctccctgaagtt
tcaagctttcttctgtcccttagaccagaggagtccctaaggagagatactatgttatgg
atggagctttgcagttggttgcaagtgaatgaaagatgcttcagaaagcctgtaacctct
gattttgagcctcaagagacaccgtcattatgccaatatgtatgcaatcttgtgggagag
taccttaagactccggtgtctgaaagagaaaattgctttatgcctgactggtttgaagct
aagcttgtcgcaacaatgattctgttggctgcagaggtggagcagatgaggaataagcac
agtggaaaaagcaacatagaatggattgaactagaggctttcttgaaccctcttctggat
gtcttgatgaaacttggcagtaatgcttacataccaacactgaaaacagataaaagccta
cagcttctcttgaagttattgcagacccgttcgttaaaatgttccaatacgcaagatgac
ggtgtattgttttttatctggaaatctctcatgacacctgtggagagtattcttgaattt
gctctccgacggcttactacaaatgagttaagcactattggtgatttggatcgttgtgat
ctatacttagctttaattccagagatggtgaatctgtgcttgcaagtcagctggaagaaa
gtaccatatatcaagaatttcattttgtccctgacaaatgcatctattcgtaatcttcaa
gagagaaattgtgaagaggagccaaagcttcaagaacaaattaaaaaagtagctagcatg
gcttcacttacagcagtttgtgagttaatggatcggaaacctgaagcacaccttgactct
ctgccttctgtggatgctctgaagagattcatttccttttctcaattcaatgatgtgtta
aagaagccatcttatattggagaagaaagtagcttatgtgaagaaacaacatcccaagga
tgggggaaaattgttgcacgctatgttcgtgaccagtggatttgccttcgttttgtttta
aattcatttcctacactgggtcaggagcataaagaaacttcagaaatgtcgttatctaca
gttgaaaggtcaagaaaagttctacagtctgcattagaagccctgactattcttccttca
gaccaagttttacctgtgtttgactgcatgaaagtccttgttcccaagcttctggactcc
tcggagcctctctgcatagaagcatttgatttggcttggaaaattatatcttctttgagc
aacacacagctgatattttggtccaatctaaaagcttttgttcagttcatctttgatact
gaggttctagctgttgctgcaagtgcaaagggtcaagcatatgccaaaataaaagagata
attttcaagctgatagatatgtccactacaaagactggagtcttcaatgtagtccttagt
cattgttgtcgatcttggatatttcccactgttgatgagagaagtgctttgacaaatgct
ttcttaaatgctggaaattattgtgaacttatcactgaggcttgtgtttttggaactgta
tttaggaaagatcagaggcttattcaggatgtgcatgccttcatagaaagtcttggagaa
aaatgtgcagcaaatgttgttacagaaagtacaaatcgagatgatcactatgttcgggtt
tgtgctattaaatttctgtgcttgctggatggatcaaataccttgcataagacatttgtg
gaagacattttcatcaaactacttgataaagatgaacaagtatccagatctagaacacgc
tattatgcaaactctttacagcatagaattaaaaaccgggtatggcagacactcttgatt
cttcttccaaagcttgaccagaattttttgtgtggaatcctcgacaaagtctttcaggct
ggatttggtaacaatcaggcatctgtgaaatacttcatagaatggattgttatcatgagt
ctacatagatacccccaattccttaataaattctgggattgcttttgctatgatgaagaa
aagcttaaaacaagcatctgcacgtttttatcagtgttatcacactttgacatcattctt
caaaatacctctgagaagaagccagctttgaagaaagccctcatagttgttctacagtgg
tgtttcaaccataatttcagtgttcgactttatgcgttagttgcccttaaaaaaatctgg
ggcatgtgcagaatgttgcatgtggaagaatttgaagctctgacgccagttattgaatct
agccttcaacaagtggaaaacatgcatggtacagggaatgctagaaggaactggcagcga
atccaagatcatttcttctttgcaacatttcatccacttaaggattacagtctagagaca
atattttacattcttccccgcctttcggagcttgctgaagatgaatggatctcgctctct
aaattcgacagattcactgacattcctttgccaccagcatttcagtggtatcattgtcga
acggaacttcgtgatctgaaaccaagtgactggtctcagcaagacatgggttcaagttca
gctgaaacagatagccagacagaatggactgatgttcagaaaaagattataccctggaaa
aacagtactcctagtttagacctggaaatggtatttcaggaccgtgctgctaaacttggt
aaatcaaacagcagactgattgtggtggcttcacttattgataaacctaccaatttagga
ggtttgtgtcgtacaagtgaaatatttggggcatctgcactagttgtgggcaatcttcat
tatgtacaagataagcagtttcagcatcttagcgtttctgcagagcagtggctccccctt
gttgaggtgaaaccatgtcagcttgttgattatttacagcagaaaaaaacggaaggctac
actattattggtgtggagcagacagctaaaagttttgatcttacagaatattgtttccca
gagaagtcactgttactgctgggaaatgaacatgaaggaatcccagcaaacctgattcac
cacctggatgtctgtgtggaaattcctcagcagggtatcattcgatccctcaatgtgcat
gtaagtggagctctgctgatttgggagtacacaaggcaacaagtcatcaagcaaaaacag
taa
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integrated database retrieval system
