Strigops habroptila (Kakapo): 115613954
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Entry
115613954 CDS
T08851
Symbol
SIX2
Name
(RefSeq) homeobox protein SIX2
KO
K19472
homeobox protein SIX2
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115613954 (SIX2)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
115613954 (SIX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
115613954
NCBI-ProteinID:
XP_030355919
UniProt:
A0A672UM53
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Position
10:29113126..29117452
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AA seq
287 aa
AA seq
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MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSAHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLSASMNGNKTVLGSSEDEKTPSGTPDHTSSSPALLLSSNP
GLQPLHSLGHPQGPSAIPVPSADPMHHHSLQDSILNPMSSNLVDLGS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctcccgacttttggcttcacccaagagcaagtggcctgcgtctgcgaggtg
ctccagcaaggcggcaacatcgagcggctggggcggttcctctggtccctccctgcctgc
gagcacctccacaagaatgagagcgtcctgaaggccaaggctgtggtggccttccaccgg
ggcaacttccgcgagctctacaagatcctggagagccaccagttctccgcgcacaaccac
cccaagctgcagcagctctggctgaaggcgcattacatcgaggcggagaagctgcggggg
cgacccctaggggcggtgggcaagtaccgggtgcgccgcaagttcccgctgccccgctcc
atctgggacggcgaggagaccagctactgcttcaaggagaagagccgcagcgtcctccgc
gagtggtacgcccacaacccctacccgtccccccgcgagaagcgggagctggccgaggcc
accggccttaccaccacccaggtcagcaactggttcaagaaccgccggcagcgggaccgc
gccgccgaggccaaggaaagggaaaacaacgagaattccaactccaacagccacaatccg
ctctcggcgtcaatgaacgggaataagacagttttggggagctcggaggacgagaagacg
ccgtcagggaccccggatcacacctcctccagccccgcgctgctgctcagctccaaccct
gggctgcagcccctgcacagcctcggccaccctcagggccccagcgccatccccgtgccc
agcgctgaccccatgcaccaccacagcttgcaggactccatcctcaatcccatgtcatct
aacctggtcgatctgggctcttaa
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