Strigops habroptila (Kakapo): 115614096
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Entry
115614096 CDS
T08851
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115614096 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115614096 (THOC5)
03041 Spliceosome [BR:
shab03041
]
115614096 (THOC5)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115614096 (THOC5)
Spliceosome [BR:
shab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115614096 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
115614096
NCBI-ProteinID:
XP_030356246
UniProt:
A0A672UX45
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All DBs
Position
11:complement(13873892..13887301)
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AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRTDGAAPEGKRGKGDGDQDLRYYSEECEVDLRDPIKDYELYRETCQ
ELQRLMAEIQELKSRGIKDNAAEIDERRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYQEAPPEISRPAITL
SEPHQQTLARLDWELEQRKRLAEKYKECLTSKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGNVEEAKAL
YKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTVDLKCKDDNVL
HLTFYYLMNLNVMTVKAKVTTAVEMTTAISAGDLLSPDSLLNCLYPGDHGRKTPNPANQF
QFDKVGILTLSDYVTELGHPYVWVQKLGGLHFPKDQPQHTVTADNTLSASHMELTVKLLR
SRLQSRLALHKQFASLEHGVVPVSSECQHLFPTKIVSRLVKWTAIPYEDYAELPYTKDVI
EAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSTLPPIFSLCLNWKGERTGSNDDNIRA
MESEVNVNYKELWGPKPGHQLLTNQLQRLCMVLDVYLETEPHDTSVEGPKEFPQEKMCLR
LVRGPLRLKPFKFNYPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggagtccagcaagaagaggaagcccaaagtgatccgcacggatggggccgcg
ccagagggcaagaggggcaagggcgacggtgaccaggacctccggtactacagcgaggag
tgcgaggtggacctccgggaccccatcaaggactatgagctctacagagagacttgccag
gagcttcagaggctcatggctgagatccaggagctgaagagccggggcatcaaggacaac
gccgcggagatcgacgagcggcgcgtgcagagctgtgtgcacttcatgacgctgaagaag
ctgaaccgcctggctcacatccgcctcaagaagggcagggaccagacccacgaggcgaag
cagaaggttgatgcgtatcacctgcagctccagaacctgctctatgaggtgatgcacctg
cagaaggagatcaccaagtgcctggagttcaagtcaaagcacgaggagatcgagctggtg
agcctggaggagttctaccaagaggccccccctgaaatcagccgtcctgccatcaccctg
tccgagccccaccagcagacactggcccgcctggactgggagctggagcagcgcaagagg
ctggcagagaagtacaaggaatgcctgaccagcaaggagaagatcctgaaggagatcgag
gtgaagaaggaatatctgagcagcctccagcctcggctcaacagcatcatgcaggcctcc
ctgcctgtccaggagtatctcttcatgccttttgaccaggcgcacaagcagtacgagaca
gcccggcacctcccgccgcctctctacgtcctcttcgtgcaagccagcgcctatggtcag
gcctgtgataagaagctcgtggtggccattgaagggaacgtagaggaagccaaagccttg
tacaagccgccggaggactcgcaggatgatgaaagcgattctgacgctgaggaggagcag
accacgaagcggcgcaggcccaccctgggcgtgcagctggacgacaagcgcaaggagatg
ctcaagcgacaccctttgtctgtcactgtcgacctcaagtgcaaggatgacaacgtgctt
catctgaccttctactacctgatgaacctcaacgtcatgacggtgaaagccaaggtgacc
actgctgtggagatgacaaccgccatcagtgccggtgacctgctctccccagactccctc
ctcaactgcctctacccaggagaccacgggaggaaaacgcccaacccagccaaccagttc
cagttcgacaaagtgggcatcctgaccttgagcgactacgtgacggagctggggcacccc
tacgtgtgggtgcagaagctgggcgggctgcatttccccaaggatcagcctcagcacacg
gtcactgctgacaacacactgagcgccagccacatggagctgacggtgaagctgctgcgc
tcgaggctgcagtcccgcctggccctccacaagcagtttgcgtccctggagcacggcgtg
gtgccagtctccagcgagtgccagcatctcttcccaaccaagatcgtctcgcgcctggtg
aagtggactgccatcccctatgaggactatgcggagctgccttacactaaagatgtgatc
gaggccggcttggctgaggacactcacctctactacatggccctgatagaaaggggaaca
gccaagctgcaggcagccgtggtcctgaaccccggttactccacactgccgcccatcttc
agcctctgcctcaactggaaaggagagcgaacgggcagcaatgatgacaacattcgggcc
atggagagcgaggtcaacgtgaactacaaggagctgtgggggcccaaacctggccaccag
ctcctcaccaaccagctgcagcggctgtgcatggtgctggatgtgtacctggagacagag
ccccacgacaccagcgtggaggggcccaaggagttcccccaggagaagatgtgtctgcgc
ctggtcaggggacccttgcgcctgaagcctttcaagttcaactacccccaggggttcttc
agccatcgctga
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