Strigops habroptila (Kakapo): 115614104
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Entry
115614104 CDS
T08851
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115614104 (HNF1A)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115614104 (HNF1A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
KPBB_C
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115614104
NCBI-ProteinID:
XP_030356270
UniProt:
A0A672UBC1
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Position
11:complement(11181024..11197568)
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AA seq
631 aa
AA seq
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MVSKLSHLQVELLGALLESGLTKETLIKALSEVEPYMLQSESQRAINALQTEKGELCPDI
PNGMGESRLSEDETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAKMVK
SYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQFTHA
GQGILTEEPMGDDLPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECNRAE
CIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTFSGPQPTSAPPLTPH
NSSSLQPPSALSPSKVHGVRYNQQPASEAESSSSNHHGNSSMVTTQTILHQVSPPGLEPS
QNLLSTDTKLVSASGGTLPPVSTLTALHSLEQNPHPLSQQTQNLIMASLPGVMAIGAGET
SSLAPAFTNTGASTLVIGLASTQPQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPLMQQ
VQSHINQSPFMATMAQIQNPHALYGPKSEVAQYTHTGLLPQTMVITDTANLSALTNLTPT
KQAFTPDSETHTESGMHTPVSQAPTIHLQNQDTTIQHLQPGPRLTSSPAVSSSSLVLYQS
SDSANSHSQLLPSTHNVIETFISTQMASSTQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgaagctgagtcatcttcaagtggagctgctgggagcactgctggagtcagga
ctaaccaaggagaccctgatcaaggcgctgagcgaagtggaaccctacatgctccagagt
gaaagtcagcgcgctatcaatgccctccagacagagaaaggggaactctgtcccgacatc
cccaatggaatgggggagtccaggttatccgaagatgaaacctctgatgacggggaggaa
tttacccctccaataatgaaggagctggaaaacttgagccctgaggaggctgctcaccag
aaggctgtggtggaaagactattacaagaggatccgtggcgagtagcaaagatggtgaaa
tcctacctgcagcagcacaacatccctcagcgtgaggtggtggacaccactggcctgaac
cagtcccacctctcacaacacctcaacaagggcactcccatgaagacccaaaaaagggca
gccctgtacacctggtatgtccgcaagcagcgagaggtggcccagcaattcacacatgct
gggcagggtatcctgacagaggagcccatgggagatgacctgcccaccaagaagggaaga
agaaaccgctttaagtggggtcctgcttcacaacagatcctgttccaagcttatgagagg
cagaaaaaccccagcaaagaagagagagaggcactggtggaagaatgcaacagagcagag
tgtattcagagaggtgtttccccttctcaggcccagggactgggctcgaacctggtgaca
gaggtcagagtttacaactggtttgccaatcgcaggaaggaggaggctttccggcacaag
ctggccatggacaccttcagtggaccacagcccacctctgctccccctctaactcctcac
aactcttcctccctccagccaccatctgctctctcacccagtaaagttcatggagtgagg
tacaaccagcagccagccagcgaggcagagtcctccagcagcaaccaccacgggaacagc
tccatggtgaccacccaaaccatcttacatcaggtttctccccctggactggagcccagc
cagaacctactgagcacagacactaagctggtctcagcttccggaggaactctccctcct
gtcagcaccctgactgccctgcacagcctagagcaaaatccacatcctctgagccagcaa
actcagaacctgatcatggcatcgctgccgggtgttatggcaattggagctggcgagacc
tcatccctagccccagcgttcaccaacacaggtgcctcaaccctggtgataggcctggcc
tcgacccagccccagagcgtacccgtaataaacagcatggggagcagcctcactaccctg
cagcccgtccagttctcccagcaactgcacccatcctaccagcagcccctcatgcagcaa
gtccagagccacatcaaccagagccccttcatggctaccatggcccagatacagaaccct
cacgctctctacggccccaagtctgaagtggcccaatacacacatacaggcctcttacca
caaaccatggtgataacagatacagccaatctcagcgccctgactaacctgacaccaacc
aaacaggcattcacacctgactcggagacccacacagagtctgggatgcacacaccagtg
tcccaggccccaacgatacatttacagaaccaagacacaaccatccagcaccttcagcca
ggccctcgcctcacctcaagccctgctgtgtcctccagcagcttggtgctgtaccaaagc
tctgactccgccaacagccacagtcagctactgccatccactcacaatgtcatcgagacc
ttcatctccacgcagatggcatcctccactcagtaa
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