Strigops habroptila (Kakapo): 115614279
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Entry
115614279 CDS
T08851
Symbol
PPIL2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115614279 (PPIL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shab03041
]
115614279 (PPIL2)
03110 Chaperones and folding catalysts [BR:
shab03110
]
115614279 (PPIL2)
04121 Ubiquitin system [BR:
shab04121
]
115614279 (PPIL2)
Enzymes [BR:
shab01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
115614279 (PPIL2)
Spliceosome [BR:
shab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115614279 (PPIL2)
Complex C
U4/U6.U5 tri-SnRNP related factors
115614279 (PPIL2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
115614279 (PPIL2)
Chaperones and folding catalysts [BR:
shab03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
115614279 (PPIL2)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
U-box type E3
115614279 (PPIL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
V-set_CD47
DUF7715
Motif
Other DBs
NCBI-GeneID:
115614279
NCBI-ProteinID:
XP_030356768
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All DBs
Position
11:9009669..9081231
Genome browser
AA seq
521 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTQFYGGKKADLPRTNFRRLSFDHCSLSLQPFEYPVCTPDGTV
FDILSIVPWIKKYGTNPITGEKLDAKSLIKLNFAKNSEGKYHCPVLFTVFTNNSHIVAIK
TTGNVFAYEAVEQLNIKPKSYKDLLTDEPFTRQDIVTLQDPTNLDKFNVSNFFHVKNNIK
VIDPDEEKAKLDPSYYLKNTNTETRETLLELYKEFKGDDILAATMKAPEKKKVDKLNAAH
YSTGAVSASFTSTAMVPETTHEAAAIEEDVVRYTYVKKKGYVRLHTNKGDLNLELHCDMT
PRTCENFIKLCKKNYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFKPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTVFGRVVGGFETLTAMENVESDPKTD
RPKEEIRIETTTVFVDPYEEADAQVAAEREKVQLEEAAAKAKAEVIPPKKEVQTPKTYRQ
GIGKYINMAAAKRSMEDDGPSTSTAAKKEKKSTGFGDFSSW
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcggcagcaccagaaggataagatgtacatcacgtgcgcggagtacacgcag
ttctacgggggcaagaaagcagaccttccacgaactaattttagacgtttgtcatttgat
cactgcagtttgtctctgcagccatttgaatacccagtttgcacaccagatgggacagtc
tttgacatactgagcattgttccttggataaagaaatatggaaccaatccaatcacagga
gaaaaactagatgccaaatcacttataaagctgaattttgctaaaaacagtgaaggtaaa
tatcactgtccagtgctgtttactgtattcaccaataactcccatattgtggccatcaag
acaactggaaatgtgtttgcctacgaggcagttgagcagctgaacataaaaccgaagagc
tacaaggatcttttgacagatgagcccttcactaggcaagacattgtgacactacaggat
ccaacaaacctggataagttcaatgtctcaaacttctttcatgttaagaacaacataaaa
gtaatagatccagatgaagaaaaagccaaattagatccatcttactatttgaaaaataca
aatacagagactcgagagactttactggagctttataaggaattcaaaggcgatgatatt
ctagcagctactatgaaggctcctgaaaagaagaaagtggataagctgaatgcagctcac
tattccactggagcagtaagtgcttccttcacctccactgcaatggtgcctgaaactaca
cacgaagcagctgctattgaagaagatgttgtgagatacacatacgtgaagaagaagggc
tacgtgcgacttcacactaataagggagacctgaacttggagctgcactgtgatatgaca
ccccggacatgtgaaaactttatcaaattgtgcaagaagaactattatgatggaacaatt
tttcacagatcaattcgtaattttgtgatccaaggaggtgatccaactggaacaggaaca
ggaggagaatcttactggggaaaacctttcaaagatgaatttaagcccaacttgtcccac
acaggacgtggtgttcttagtatggcaaattcaggacccaacacaaacaaatcacagttc
ttcatcacattccgctcttgtgcatatctggacaagaagcatacagtttttggaagggtg
gttggtggctttgagactctgactgctatggagaatgtggaaagtgaccccaaaacagac
cgtcccaaggaggaaatacgaattgagacaacaaccgtttttgttgatccatatgaagaa
gcagatgcccaggttgctgctgaaagagagaaggtccagctagaagaagcagcagccaaa
gcaaaagctgaggtgatcccaccaaagaaagaggtccagactcctaaaacttaccggcag
gggattggaaaatacatcaacatggctgcagcgaagcgcagcatggaagatgatgggccc
tcaaccagcacagctgcaaagaaagagaagaagagcacaggcttcggggacttcagctcc
tggtag
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