Strigops habroptila (Kakapo): 115614512
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Entry
115614512 CDS
T08851
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115614512 (LHX5)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
115614512 (LHX5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
ARM_UBR_1_2_3
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
115614512
NCBI-ProteinID:
XP_030357352
UniProt:
A0A672UV26
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All DBs
Position
11:complement(12206633..12214678)
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AA seq
402 aa
AA seq
DB search
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRF
GTKCAGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYL
NSPSLKEGSLNSVSSCTDRSLSPDLQDPMQDDTKETDNSTSSDKETTNNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYGPGGNYDFFPHGP
PSQAQSPADSSYLQNSGPGSTPLGPLEPPLSGHHSSENQRYTDMISHPDTPSPEPGMTGS
LHPIPGEVFSGGPSPPFSMSSNSGYSGALSHPNPELSEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcattgtgcgggctgcgagaggccgattttggaccggttcctgctgaacgtc
ttggacagggcatggcacatcaaatgcgtccagtgctgcgagtgcaagtgcaacctcacc
gagaaatgcttctccagggaaggcaaactctactgcaaaaatgactttttcaggaggttt
ggtaccaaatgcgccggctgctcccagggcatctcccccagcgacctcgtccggaaagcg
cggaataaagtctttcacctgaactgtttcacctgcatggtctgcaacaagcagctctcc
acgggcgaggaactctatatcatagacgaaaacaaatttgtttgcaaagaggattatttg
aactctcccagtttgaaggaaggaagcctcaactcagtgtcctcatgtacagacaggagt
ttgtccccggatctccaggaccccatgcaggacgacacgaaggagacggacaactcgacc
tcctcggacaaggaaaccaccaacaacgagaacgaggagcagaactcgggcaccaagcgg
agggggccccgcaccaccattaaagccaagcagctggagaccctcaaagctgccttcgcc
gccacccccaaacccacccgccacatccgagagcagctggcccaggagaccggcctcaac
atgagagtcatccaggtctggttccagaaccgtcggtccaaggagcgccggatgaagcag
ctgagcgcgctgggcgcccgccggcatgccttcttccgcagcccgcgcaggatgcggccc
ctcggcggccgcctcgacgagtccgagatgctcggctcgacgccctacacgtactacgga
gattaccaaggtgactactacggaccgggaggcaactatgactttttcccccacgggccg
ccctcccaagcccagtccccggccgactccagctaccttcagaactcaggacccggctcc
acacccctgggacccttggagccccccttaagcggacaccactcctcagaaaaccaaagg
tacacggatatgatctcgcatcccgacacccccagccccgagccggggatgaccggctcg
ctgcaccccatcccaggggaggtcttcagcggggggcccagcccacccttctccatgtcc
agcaatagcggctacagcggggccctctcgcaccccaacccggagctcagcgaggcagcg
gtgtggtag
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