Strigops habroptila (Kakapo): 115614577
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Entry
115614577 CDS
T08851
Symbol
TAF6L
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115614577 (TAF6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115614577 (TAF6L)
03036 Chromosome and associated proteins [BR:
shab03036
]
115614577 (TAF6L)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115614577 (TAF6L)
Coactivators
SAGA/TFTC/STAGA complex
115614577 (TAF6L)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115614577 (TAF6L)
STAGA complex
115614577 (TAF6L)
TFTC complex
115614577 (TAF6L)
SAGA complex
115614577 (TAF6L)
SLIK complex
115614577 (TAF6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
115614577
NCBI-ProteinID:
XP_030357503
UniProt:
A0A672U2C5
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All DBs
Position
1:complement(122374363..122377348)
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AA seq
620 aa
AA seq
DB search
MSEREERRFVELPRDSVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTRR
RKLTVEDFNRALRWSNVEAVCGYGSQDALPFRAIKEGELYFQEDREVNLVELALATNIPK
GCAETTVRVHISYLDGKGNLEPQGAVPSAVSTLTDDLLKYYQHVTRAVLGDDPQLMKVAL
QDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLNRLLHIARSLIQNPFLCLGSYVCSLIA
SVMYCVLEPLAASINPLNDHWTLRDYAAMLLSRIFWTHGDLVSGLYHQILLSLQKVLADP
VRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKAQQVPAPVPGTDPRHEGSPRHSPKQDAEVGFGLGRTLLQLGSGSGGP
PSSSSPSSSPPAPPALSLHDMYRELYDFFGDSLAARFGTGLPPTTSQPPGTPEGTRKDPP
SFGGEGAARKMPQLTASATVSPREEETMRGEAAGPRPALHRTTSLPRPRGAPRQPGHRPG
ARDVFQKCRFAPRGAPRFSFLIAGRQAGRRCQGRLFQTSFPQHHGPGHVSRYTQKLPMIG
RSSRPTRRWPRAEYSLHLLL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcgggaggagcggcggttcgtggagctgccgcgggactcggtgcggctgatg
gcggagagcaccgggctggagctcagcgacgaggtggcggcgctgctggccgaggacgtg
tgctaccggctgcgagaggccacgcagaacagctcccagttcatgaaacacacgcggaga
cggaaactgacggtggaggatttcaaccgggcgctgcgctggagcaacgttgaggccgtg
tgtggctatggctcccaggatgcgctgcccttccgggccatcaaggagggtgagttgtac
ttccaagaggatcgggaggtcaacctagtggagctggccctggccaccaacatccccaag
ggctgcgctgagacaactgtgcgagtgcacatctcctatctggatggaaaaggcaacctg
gaaccacagggagctgtgcccagcgctgtctccacgctgaccgatgacctgctcaagtac
taccaacacgtcacccgcgcagtactgggtgatgacccccagctgatgaaggtggccctc
caggacctccagactaactccaagattgctgcgctcttgccctactttgtctatgtggtc
agcggggtgaaatcagtgagccacgacctggagcagctcaaccggttgttacacatcgcc
cggagcctgatccagaatcccttcctctgccttggctcctacgtgtgcagtttgatcgcc
agcgtcatgtactgcgtcttggagccattggctgcctccatcaaccccctcaacgaccac
tggactctccgcgactacgctgccatgctgctcagccgcatcttctggactcacggcgat
ttggtgagcggcctctaccaccaaatcctcctctcgctccagaaggttctggccgacccc
gtgcgcccgctctgctcccattacggcgccgtggtggggctgcacgccctcggatggaag
gctgtcgagcgggtgctttacccgcatctccccacgtattggaccaacctccaggcagtg
ctggatgactactcggtctccaacgcccaggtcaaagccgatgggcacaaagtctatggt
gccatcctggtggctgtagagcggctgttgaagatgaaggcgcaacaggtgcctgcaccg
gtgcccggcactgacccacggcacgagggctcaccgcggcacagccccaagcaggatgct
gaggtgggctttggcctcggacgcacattgctacagttggggagtggcagcggtgggccc
ccatcatcatcatcaccatcctcatccccccctgcaccgcccgctctgtcgctgcatgac
atgtaccgggagctctatgacttcttcggtgacagcttggctgcccgttttggcaccggt
ttgccaccaaccacctcccagccccccggtacccctgagggcacccgtaaggaccctccg
agctttgggggtgaaggggcagcgcggaagatgccgcagttaacagcgagtgccacggtg
agccctcgggaggaggagaccatgcggggcgaggccgcgggcccgcgcccagcactgcat
cgcacaaccagcctcccgcggccccgcggggccccccggcagcccgggcaccggcccggg
gctcgtgatgtcttccagaagtgccgcttcgcgccacgtggagccccgcggttcagcttc
ctcatcgccgggcgccaggctgggcggcgctgccagggccgcctcttccagaccagcttc
ccccagcatcacgggcccggccacgtgtcccggtacacccagaaactgcccatgatcggg
cgcagctcccggcccacgcggcgttggccacgtgcggagtattccctccatctcctgctg
tga
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