Strigops habroptila (Kakapo): 115614675
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Entry
115614675 CDS
T08851
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03030
DNA replication
shab03410
Base excision repair
shab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115614675 (POLE)
03410 Base excision repair
115614675 (POLE)
03420 Nucleotide excision repair
115614675 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shab03032
]
115614675 (POLE)
03400 DNA repair and recombination proteins [BR:
shab03400
]
115614675 (POLE)
Enzymes [BR:
shab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115614675 (POLE)
DNA replication proteins [BR:
shab03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
115614675 (POLE)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
115614675 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
NAD_binding_9
Motif
Other DBs
NCBI-GeneID:
115614675
NCBI-ProteinID:
XP_030357730
LinkDB
All DBs
Position
11:15139417..15168080
Genome browser
AA seq
2298 aa
AA seq
DB search
MVLRGGGDPEGARRGRRAGGPRGPAAGADGAAAGRDDGPALSALKRLERSQRTDRLDALF
GFERPAEPGERTGWLINMHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVALPYKPYFYIAT
QKGCEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVRK
EISPAVRKNRERDQASDVYTAMLSSALSGGILSTDEEGASRKVANQMDNIVDMREYDVPY
HVRVSIDLKIHVAHWYNVRYRGSTYPPEITCRDDLVERPDPVVLAFDIETTKLPLKFPDA
ETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGQFCVFNEPDEAHLIQRWF
EHIQETKPNIIVTYNGDFFDWPFVEARAAVHGINMYQEIGFQKDSQGEYKASQCIHMDCL
RWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYY
MYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLT
EDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLVQHVEKTLRHAIEDEEGL
PLDQVTNFQEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDE
ATCAACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPALAPNAAPRAFH
ELSREEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEF
KGLHKVWKKKLSAAVEAGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYS
MEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKV
TISYPGAMLNILVKEGFTNDQYQELQDPASLTYATRSENSIFFEVDGPYLAMILPASKEE
GKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAK
VADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQM
VKDAGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAIL
DWDYYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFT
SEGKRQVLTNQPSEGTPSSQIGDIEDFGAAKTRQPTVPIANKRKRVTAAEESQQMSQYLE
LSQSWREILGPPPPLGITKEQRLVWLRYHQKKWELQARQRQERCKRRRLEDGGEAAAGGG
VRQALSKGLGSYLRRAARSILDLPWQVVQIAETSQPGLFRLWAVIGSDLHCIRLSIPRVF
YVNQRVPKLEEGVAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGV
YETQVPLLLRALIQLGCVCMVSRQLVGQLAGREAETFDIEHLEMRSLAQFTYLEPGSIRH
IYLYHSSQGSKALLGLFIPSQRKAAVFVLDKVRSNQMPNLTTLFSAERSALLEKVGEELL
PPDKHTFEVRAETDPKAIYRAIQRLLLGYKDERRGPTLVAVQSNWDLKRLVSAIPVMEEF
PLVPIQLVDDISYLVLDWQRHAARHMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPSDIST
FGSDLFFSRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVC
LELDIQSLAVNTVLQSHHINDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETA
LCSNTFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMK
KLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTIS
FSRCWEFLLWMDPANYGGIKGKVDSRIHYGEDTSKRQVLEEEKEDSEEEEEAVGEEEEEG
EPNVEELLENSWNIAQFLPQTASCQSYFLMIVSAYIVAVYHSMKEELRRSAPGSTPVKRR
STSQVSQEAPGEMGAMPGMITFSQDYVANELTQSFFTITQKIQKKVAGSRNATEPSDMFP
VLPGSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSGAAQFQDPC
RSYVLPEVICRNCNFCRDLDLCKDPAVSQDGSVLPSWVCSNCQVQYDSDAIEAALVEALQ
KKLMAFVLQDLVCKKCHGVKERHMPVYCSCAGDFALTISSQTFMDHVKVFQNIARHYSMA
YLLETIEWLLCTNPQLQQ
NT seq
6897 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcggggcggcggagaccccgagggagcgcggcgcggccggcgggccggaggg
ccgcgggggcctgcggcgggggctgacggcgcggcggctggcagggacgatggccccgcg
ctgtccgctctcaagcgcctggagcgatcgcagcgcacggatcggctggacgcgctgttc
ggcttcgagcgacccgcggagcccggggagcggacgggctggctcatcaacatgcacccg
acggaggtgctggatgaggaccggcgatcggtgagcgctgtggactattacttcatccag
gaggacgggagccgcttcaaggtggccctgccctacaagccttacttctacattgccact
cagaagggctgcgagcgagaagtgtcctccttcctctccaagaagttccaagggaagatt
gcaaagctggaaactgtccccaaagaagacttggacctgccaaaccacttggtgggcctg
aagaggaactacatcaagctatccttcaacacagtggatgatttggtgaaggtgcggaag
gagatctctcctgccgtgcggaaaaacagagagcgggaccaggcgagtgatgtctacacg
gccatgctgtcaagtgctttgagcggaggcatcctgagcacggatgaggaaggggcctcc
agaaaggtggccaaccagatggacaacatcgtggatatgcgggagtacgatgtaccctac
cacgttcgcgtctccattgacctgaagatccacgtggctcactggtacaacgtgcggtac
cgaggcagcacctacccccctgaaatcacctgccgggatgacctcgtggagcgcccagat
cctgtcgttcttgcctttgacattgaaactaccaaactccctttgaagtttcctgatgca
gagacagaccagatcatgatgatctcctacatgattgatgggcagggctacctgatcaca
aacagggaaatcgtctctgaggatattgaagactttgagtttactcccaagccagagtat
gagggtcaattttgtgtctttaatgaaccagatgaagctcatttaatccagaggtggttt
gaacatatccaggagaccaaaccaaacatcattgtcacatacaatggagacttctttgac
tggccctttgtggaagcaagagcggcagttcatggaattaatatgtatcaggaaattggg
tttcagaaggacagccagggagagtacaaagcatcccagtgcatccacatggactgtcta
aggtgggtgaagagggacagttacctcccagtgggaagtcacaacctgaaagcagcagct
aaagcaaaactgggttatgatccagtggagctggatcctgaagagatgtgccggatggct
acggaggagcctcagaccctggccacctattcagtgtccgatgcagttgctacctattac
atgtatatgaagtacgtgcatcctttcatttttgccttgtgcaccatcattcccatggag
cctgatgaggtgttaagaaaaggatctgggacactgtgcgaggcactgctgatggttcag
gcttatcatgccaacatcatcttccccaacaagcaggagcaggaattcaacaaacttaca
gaagatggccatgtgctggactcggagacatacgtgggaggccacgtggaagctctggaa
tcaggagtcttccgcagtgacatcccctgccgcttcagaatgaatcctgctgccttcgac
ttcctggtgcagcacgtggagaagacgctgcggcacgccatcgaggatgaggaaggtctg
ccgctggatcaagtcaccaacttccaggaggtttgtgatgaaatcaaggtcaaactgaat
tccctgaaggatgttccaaacagaattgagtgtccccttatctaccatctagacgtggga
gccatgtaccccaacatcattctgaccaacaggttgcagccctcagccatggtggatgag
gccacatgtgctgcctgtgatttcaacaagccgggtgccaactgccagcgccggatgact
tggcagtggagaggagagttcatgcctgccagccgcagtgagtaccaccgcatccagcag
cagctggagtcagagaagttccctgccctggcccccaacgcagcaccccgcgccttccat
gagctctcccgggaggaacaggccaagtacgagaagaagcggttggcagattactgccgc
aaggcgtataagaagatccatgtcaccaaggtggaggaacgagtcaccaccatctgccag
cgagagaactctttctatgtggacacagtgcgagctttcagggaccgccgctacgagttc
aaggggctgcacaaggtgtggaagaagaagctatctgcagcggtggaggcaggagatgcc
tctgaagtgaagcgctgcaagaacatggaaatcctgtatgactccctgcagctggcccac
aagtgcatcctcaattctttctacggctacgtcatgcggaagggagctcgctggtactcc
atggaaatggctggcatcgtctgcttcacgggagcaaatatcatcacccaggccagagaa
ctgattgagcagattgggagacctctggaactggatactgatgggatttggtgtgtcctc
cccaacagcttcccagagaactttgtcatcaagtcaaccaatgccaagaaaccaaaggtg
acaatctcctacccaggtgccatgctgaacatcctggtgaaggaaggcttcacaaatgat
cagtaccaggagctgcaggacccggcctccctcacctatgccacacgctcggagaacagc
atcttttttgaagtggatgggccgtacctggccatgatcctccctgcctccaaggaggag
ggcaagaagctgaagaaaaggtatgcagtgttcaacgaggatggctccctggccgagctg
aagggctttgaggtgaagcgccggggagagctgcagctggtgaagatattccagtcttcg
gtgtttgaagcctttctgaagggcagcaccctggaggaggtctacgcttctgtggccaag
gtggcagattactggctggatgtgctctacagcaaggctgccaacatgcctgattcggag
ctgtttgagctgatctcagagaaccggtccatgtcacgcaagctggaggactacggggag
cagaaatctacatccatcagcactgccaagcgcctggcagagttcctgggggaccagatg
gtgaaggatgcagggctgagctgccggttcatcatttccaagaaaccagaagggtctcca
gtcacagagagggccattcctctcgccatcttccaagccgagcccagcgtgcgcaaacac
tacctccggaagtggctgaagagcccttcgctgcaggacttcaacatccgtgcgatcctg
gactgggactactacattgagagactgggaagcaccatccagaaaatcatcaccattcct
gcagccctgcagcaggtaaagaacccagtgccacgggtccggcacccagactggctccac
aagaaactcctggagaagaatgatgtgtacaaacagaaaaaaatcaatgagctcttcact
tcggaaggcaagagacaggtcctcaccaaccagccctcagaggggacgcccagctcacag
attggtgacatagaggattttggggctgccaaaacccgtcagccgacagttcctattgca
aacaagcggaagcgagtcactgcagcagaggaaagccaacagatgtcccagtaccttgag
ctatcccagtcctggcgagagatcctgggtccaccaccacccttgggcatcaccaaggag
cagcgcctggtctggctgcgctaccaccagaaaaagtgggagctgcaggcgcggcagcgg
caggagcggtgcaagaggcggcgcctggaggacggtggggaggcagcggcgggaggaggc
gtccgccaggccctctccaaagggctgggcagttacctgcgccgggcagcgcgcagcatc
ctggacctgccctggcaggtcgtgcagattgctgagaccagccagcctggactgttcagg
ctgtgggcagtgattggaagcgacctgcactgcatcaggctgagcattccccgggtcttc
tatgtcaaccagcgtgtcccaaagctggaggaaggagtagcctacaggaaggtgaacagg
atcctgccccgctcaaacttagtttacaacctgtatgaatactcagtccctgaagacatg
taccaagagcacatcaatgaaatcaatgcagacctctctgctccggacatcgagggggtg
tatgagacacaggtgccgctgctcctccgtgccctgatccaactgggctgtgtgtgcatg
gtcagcagacagcttgttgggcagctggcagggcgggaggctgaaaccttcgacatcgag
cacctagagatgcgctcactggcccagttcacgtacctggagccaggaagcatccgccac
atctacctctaccacagctcccagggcagcaaggcgctcttgggcctcttcatcccctca
cagcgcaaagctgctgtctttgtgctggacaaggtccgcagtaaccagatgccaaatctc
accaccctcttctcggcggagcgcagtgcgctgctggagaaagtgggtgaagagctactg
cccccagacaagcacacctttgaagtgcgcgctgagactgaccccaaggccatctataga
gccatccagcggctgctgctgggctacaaggatgagcgccgaggccccacgctcgtggct
gtgcagtctaactgggacctgaaacggctggtgagcgcgatccccgtcatggaagagttc
cccttggtccccatccagctggtagatgacatcagctacttggtcctggactggcagcgc
cacgccgcccgccacatgatccgccactacctcaacctggacacgtgcctctcccaggcg
ttcgagatgagcaggtactaccacatccccattgggaacctccccagtgacatctccacc
tttggctccgacctgttcttctcccgccacctccgtcgtcacaaccacttgctgtggctc
tcacccacagcccgcccagatctggggggtaaagaggctgatgacaaccgcctagtcatg
gagtttgatgagagagcctctgtggagatcaacaaccctggttgctactccacagtgtgt
ctggagctggacatccagagcctggctgtaaacacggtgttgcagtcccaccacataaac
gacatggaaggaggctccagcatgagcatcagctttgacgtgattcagcaggcatcccta
gaagacatggtgacagggaaccaagctgccaacatcccggccagctatgatgaaactgcc
ctctgctccaacactttcaggatcctgaagagcatggtggtgagctgggtgaaggagatc
acgcagtatcacaatgtctacgcggacaaccaggtcattcacttctaccgctggctccgc
tctccttcctccctgctctatgacccggcactgcaccgcacgctccacaacatgatgaag
aagcttttcctgcagctggtggcagagttcaaacgtttgggctcctcagtggtttatgct
aacttcaaccggatcattctgtgcaccaagaagcggcgcatcgaggatgccatcagctac
atggaatacatcatcaatagcatccactccaaggagatcttccactctctgaccatctcc
ttctcccgctgctgggagttcctgctctggatggatccagcaaattatggaggtatcaag
ggaaaagtggattctcgcatccactatggggaggacaccagcaagaggcaagtgttggag
gaggagaaagaggacagcgaggaggaggaggaggcggtgggggaagaagaggaggaaggg
gagccaaacgtggaggagctgctggagaacagctggaacatcgcgcagttcctgcctcag
accgcctcctgccagagttacttcctgatgattgtgtcagcctacattgtggccgtgtac
cacagcatgaaggaggagctgcggcgcagtgcccctgggagcacccctgtcaagaggagg
agcaccagccaagtgtcccaggaggcaccgggggagatgggggccatgcccggcatgatc
accttctcacaggattatgtggctaatgaactcacccagagcttcttcaccatcacccag
aagatacagaagaaggtggctggttctcgaaatgccaccgagccttcggacatgttccca
gtgctgcctggctcctacttgccactcaacaacccggctttggagttcatcaaatatgtt
tgcaaggtcctctctctggatgccaatataaccaaccaggtgaacaaactgcgccgggac
ctgctgcgcctcattgaggtgggcgagttctcaggagctgcccagttccaggacccttgc
cgctcctatgtgctccctgaagtcatctgcaggaactgtaacttctgcagggacctggac
ctgtgcaaggaccctgccgtctcccaggatgggtcggtgctgcccagttgggtctgctcc
aactgccaggtgcagtatgactccgatgccatcgaagcagcactggtggaagccctgcag
aagaagctgatggcctttgtgctgcaagacctggtgtgcaagaagtgtcatggcgtgaag
gagagacacatgccagtgtactgcagctgtgctggagactttgccctcaccatctcctcc
cagacctttatggaccatgtcaaagtcttccagaacatcgcccggcactacagcatggcc
tatctgctggagacgatcgagtggctgctgtgcaccaatccccagctccagcaatga
DBGET
integrated database retrieval system
