Strigops habroptila (Kakapo): 115614714
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Entry
115614714 CDS
T08851
Symbol
FANCD2
Name
(RefSeq) Fanconi anemia group D2 protein isoform X1
KO
K10891
fanconi anemia group D2 protein
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115614714 (FANCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shab03400
]
115614714 (FANCD2)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
115614714 (FANCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
CCDC53
Motif
Other DBs
NCBI-GeneID:
115614714
NCBI-ProteinID:
XP_030357810
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All DBs
Position
11:23777029..23817687
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AA seq
1440 aa
AA seq
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MVSKRKLLKAETSGENSNADPPSRCSETKKSRISAPDRVETEGIFEELIRTSGIVLKVGE
GQNEIAVDQMTFQKKLCLALEKHPAYPGVVKQFISGLESHIKDRNQFKNCLLPCSPIQTE
GSRTRHLYCDSLIKLLLGIKILQPAVITLLLEKIPEFFFDIVGTFGTDFPRLIINQFKWL
DKFLDSQDLVKKLMQLVSVSPVPIQHDIITSLPEILEDSQQSEVARELSCLLKQGRRLTV
PILDALSRLDLDAGLLAEVRQSAMTIVPSVKLEDLPVVVKFILHNVKAADAVEVISDLRK
NLDLSSCDLPLKILSSQKKVKSQVQASSSMSQVTTSQNCVKLLFDVIKLAVRFQKEVSEA
WIKAIENSTSVSDHKVLDLMVLLLIHSTNTKYGKQAEKLLKSKIRLGCMPEQLMQNAFQN
HSLVIKDFFPSILAVAQTFLHSGHPAVVSFGSCMYKQAFAAFDSYCQQEVVTALVTHVCS
GNETELDISLDVLTDLVVLHTALLMRYATFVKTILDSTQKLHPCQIRKLFYILSTLAFSQ
RQEGSYIQDDMHMVIRKWLSSTVPNHKQMGIIGAVTMIGSVALKRNEGDGSSLERPELNS
ERDEQLSNLLDLVGICCEQTPEVLALYYDEFANLIEKQKGNLDLQLLDKFGKSLVEDFPS
DFVVDLGPTVDGSFLFPVKSLYNLDEDETQGAIAINLLPLVSQSDLGRVTGGMSSQSKRV
VSPLCLSPCFRLLRFYTAEQNSGSLEEIDALLGCPLYLTNLEVEGKLDSLSKQEREFLCS
LLFYALNWFREVVNAFCQQQDAEMKGKVLTRLQNITELQNVLGKCLAATPGYVPPPATFD
SEALEAVSSTNAVGPVRKKNGKKKKTDGSKASSADRSQADDSSEGNQPDTELSELEKTTA
EREAENPLTKLQNYRPYFRELDLEVFTVLHCGLLTKSVLDTEMHTEFCEVVQLGPTELSF
LLDDLCWKLEHVLTPSSTRRVPFLKERSYRDIGFSHLCQRSPKEVATCVVKLLKPLCNHT
EKMHSYFQAVIQNQGAEDEPGVNIQEHMLMSSCYQQLLLTFRSLFAWNGFSQPENTDLLR
SALQVLAERLKPGETEFLLLEDLISESFHYVLNFQQSVPSFYCAFILTQLLITIAEKPMA
GWKKEKIASLAKQFLCQSWVRPSGDREKGNQFNSALHTLLCVYLEHTDNILKAIEEISSV
GVPELINSAKDGCSSTYPTLTRQTFLIFFRVMMAQLESSVKSIPAGKPSDSSEVQLEKLL
RWNIAVRNFHILINLVKVFDSRPVLGVCLKYGRLFVEAFLKLAMPLLDYSFKKHRDDVQS
LLKTLQLSTRQLHHMCGHSKIHQDIGLTNHVPLLKKSLEQFVYRVKAMLAFNHCQEAFWL
GVLKNRDLQGEEILSQASGDKGSDEEDSAESPAEELSGSSTDHSDENGAGPAGPGSPAAP
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcaaaaaggaagctgttgaaagctgagacttctggagagaacagcaacgcagat
ccgccgagtaggtgctcagaaacaaagaagtcgcggatttctgcccctgatagagtggag
actgagggaatttttgaagagctcattagaacatcaggaattgtactgaaagttggggag
ggacagaatgaaatagctgtggatcaaatgactttccagaagaagctctgtctggccctg
gagaagcacccagcctacccaggcgttgtgaagcaatttatcagtggtttggaatctcac
atcaaggacagaaaccagttcaagaactgtctcttgccctgttctcccatacagaccgag
gggtcaaggactcgacacttgtattgtgacagcctcattaaactgcttctgggaattaag
atcttacagcctgctgtcataacactgttgttggaaaagatccccgaattcttttttgac
attgtgggcacctttggaacagattttccccggctcatcatcaatcagtttaaatggctt
gacaagtttcttgacagccaggatcttgtcaagaagttaatgcagctggttagtgtctct
ccagtgccaatccagcatgatattatcaccagtttacctgagatcctggaagattcccag
caaagtgaagttgccagagagctcagctgcttactcaaacagggcaggcggctgacagtt
ccaatcctggatgccctttctcgtctggatctcgatgcaggccttctggctgaggtgcga
cagtctgccatgaccattgtgccttctgtaaaactggaagatttgcctgtagtagtaaaa
ttcattctccataatgtcaaggcagcagatgcagtagaggtgatttctgatctccgtaag
aacttggatctgtcatcatgtgatctgcccctgaagatcctaagttcccagaagaaggtt
aaaagtcaagtccaggccagttcttccatgagccaagtaaccaccagccagaattgtgta
aagctactttttgatgtgatcaagttagctgtgagatttcagaaagaggtctctgaagca
tggattaaggctattgagaacagcacgtctgtatctgaccataaggttctagatctgatg
gttttgctgctaatccattctacaaacaccaagtacggaaagcaggctgagaaattactg
aagagcaaaatccgactgggctgcatgccagaacagctgatgcagaatgccttccagaat
cattcattggttatcaaagactttttcccttcaatcctagcagttgctcagacgtttctg
cactctggacacccagccgtggtttcctttggcagctgcatgtacaaacaagcttttgca
gcctttgactcttattgccagcaggaggttgtcactgctttggtgacccacgtgtgcagt
ggaaatgagacagaactggacatttctctggatgtgctcactgatttggtggtgctgcac
acagccctgctgatgcgctacgccactttcgtgaagaccattttagactctacacagaaa
ctgcatccatgccagatccggaagctcttctacattctcagcacactagcatttagccag
aggcaagaaggaagctatattcaggatgatatgcatatggtgatcaggaaatggctttcc
agcacagttcccaaccacaaacaaatggggattattggtgctgttaccatgataggcagc
gtggcattaaaaaggaatgaaggagatggtagttccttggagagaccggagctgaacagc
gagcgtgacgagcagctttctaacttgctggaccttgtgggcatctgctgtgagcaaaca
ccagaggtcttggctctgtactatgatgaatttgccaacttgattgagaagcagaagggg
aatctggacttgcagctcctggacaagtttggaaagagtttggtggaggactttcccagt
gactttgtggtggatctcggccccacagtggatggttcattcttgttcccagtgaagtcc
ttgtataatctggatgaagatgaaactcagggagcaattgccattaacctcttaccactg
gtgtcacagagtgatcttggaagggtcactggtggaatgagcagccaaagtaaaagggtg
gtgtcaccactatgtctgtcaccctgtttccgactgctgaggttctacactgcagagcaa
aacagtggaagcctggaggagatcgatgccctattaggttgccccctgtacctgactaac
ctggaggttgaagggaagctggactctctatccaagcaggaacgggaatttctgtgctca
ctcctgttctatgctctcaactggtttcgtgaggttgtaaatgccttctgccagcaacag
gatgctgagatgaaggggaaagttttgactcgattacagaacatcacagagctgcagaat
gtgctggggaaatgcttggcagcaacccctggatatgtcccaccaccagctacttttgat
tctgaagccctggaggctgtatcatccactaatgctgttggtccagtgagaaaaaagaat
ggaaagaaaaaaaagactgacggcagcaaagccagctctgcagatcgttctcaagcagat
gacagttctgagggaaaccagcctgatactgagctctctgagctggagaagactactgct
gagagagaggcagaaaatcctctgacgaagctgcagaactatcgcccgtacttccgagag
ttagaccttgaggtgttcaccgtgctccactgtgggctgctgacaaagtctgtcttggac
acagagatgcatacagagttttgtgaagttgtgcagctggggcctactgaacttagcttc
cttctggatgacctgtgctggaagctggagcatgtgctgaccccaagctccacaaggaga
gtgccctttctaaaggaaagaagctacagggatattggcttttcccacctgtgtcagaga
tcccccaaggaagttgctacatgtgtagtcaagctactaaagccactgtgtaatcacacg
gagaaaatgcacagctacttccaggcagttatacaaaatcagggtgcggaagatgaacca
ggagtgaacatccaggagcacatgctgatgtcttcttgttaccaacagctgttactaact
tttcgctccctatttgcttggaatggtttttctcagcctgaaaatactgacttgctaagg
tcagctctccaggtgcttgcggagagactaaaaccaggagagacggagtttcttcttctt
gaggatctgataagtgagagttttcactacgtgctgaatttccagcagagtgttcccagc
ttctactgcgcattcatcctcactcagctcctgatcaccatcgccgagaaaccaatggct
ggctggaagaaagagaaaattgcttcactagcaaaacagttcctttgccagtcatgggtg
aggcctagtggagaccgagagaagggcaaccagttcaacagtgcgctgcatactctgctc
tgtgtctacctggagcacacagataacatcctgaaagctatagaagaaatctcgagtgtt
ggtgtccctgaactgatcaactctgccaaagatggatgttcttctacttaccctactcta
accagacagacattcctgattttcttcagagtaatgatggctcagctagagagttcagtg
aaaagcatcccagctgggaaaccatcagactcgagtgaggtgcaactggagaagctgctg
cggtggaacattgctgtgcggaatttccatatcctcattaacttggtcaaggtgtttgac
agcaggcctgtactcggcgtctgcctgaagtatggccgtctctttgtagaagcatttctg
aagcttgccatgcctctcctggactacagctttaaaaagcacagggatgatgtgcagagt
ttgctgaaaaccttgcagctgagtaccagacaacttcatcacatgtgtgggcattccaag
attcaccaagacattggactgaccaaccacgtgcctttgttgaagaagtctctggaacaa
tttgtataccgagtgaaggcaatgctggcattcaaccactgccaggaggcattttggctg
ggtgtccttaaaaatcgggatcttcagggagaagaaatcctgtcccaagcctctggagac
aagggctccgatgaggaggactccgcagaaagtcctgctgaggagctgagcgggagcagc
acggaccacagcgacgagaacggtgccgggccggcggggccgggctcccccgcggcgccc
tga
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