KEGG   Strigops habroptila (Kakapo): 115614789
Entry
115614789         CDS       T08851                                 
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:shab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115614789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:shab04131]
    115614789
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shab04147]
    115614789
Membrane trafficking [BR:shab04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    115614789
Exosome [BR:shab04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115614789
  Exosomal proteins of other body fluids (saliva and urine)
   115614789
  Exosomal proteins of colorectal cancer cells
   115614789
  Exosomal proteins of bladder cancer cells
   115614789
SSDB
Motif
Pfam: VPS28 DUF1517
Other DBs
NCBI-GeneID: 115614789
NCBI-ProteinID: XP_032776116
LinkDB
Position
1:695930..697849
AA seq 183 aa
MAELFAXGETLQALEKAYIKDCVSPNEYTAACSRLLVQFKAALKQVQGAEISSIDDFCRK
FRLDCPLAMERIKEDRPITIKDDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEVQPDLR
ELMETMNRMSHLPPDFEGRQKVNQWLQTLSGMSASDEWMISQVRQMLFDLESAYNAFNRS
LHS
NT seq 552 nt   +upstreamnt  +downstreamnt
atggccgagctcttcgcgnntggtgagacgctgcaggcgctggagaaggcctacatcaag
gactgtgtctctcccaacgagtacacggccgcctgctcccgcctcctggtccagttcaaa
gccgccctcaagcaggtccaaggggccgagatcagctccatcgatgacttctgccgcaag
ttccggctcgactgccccttggccatggagaggatcaaggaggatcgacccatcaccatc
aaggatgacaaaggcaacctcaaccgctgcatcgccgacatcgtctctctcttcatcacc
gtgatggacaagctccgcctggagatccgagccatggacgaggtccagccggacctgcgg
gagctgatggagaccatgaaccgcatgagccacttaccccccgacttcgaggggaggcag
aaggtcaaccaatggctgcagaccctcagcgggatgtcggcctcggatgagtggatgatt
tcccaggtgaggcagatgctgtttgacctggaatctgcctacaacgccttcaaccgttct
ctccactcctga

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