KEGG   Strigops habroptila (Kakapo): 115614834
Entry
115614834         CDS       T08851                                 
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
shab  Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:shab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:shab03009]
    115614834 (RRP9)
Ribosome biogenesis [BR:shab03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    115614834 (RRP9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd NBCH_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_RFWD3 WDR54 Beta-prop_LRRK2 VPS8_N
Other DBs
NCBI-GeneID: 115614834
NCBI-ProteinID: XP_030358081
LinkDB
Position
11:23629429..23634132
AA seq 638 aa
MRGPVFVAMSSLAISRTRFSAVSRGCHLQPFPVATAESPHTPVLPKQPRRVRRPPCRGGA
CPVWGGAAPAVTAPYRSELAGCRGSANRAMFPGAGPLGVGAPPEGRGQCSGAGPTAEGAW
LGTDGAVLPIGAAGGVAWPRADSSEERVPRAAAAWRLRREAGGPRPRAGRQDGGGRGRRF
VPQVPGAEGRPRVAAGRPVDEEVSSDSETESPLLGRRRREAVAAEEEVEETPQEKKLRLA
KLYLEQLRQHEEERAEEEEETQPADLIGDRLKEDVLEQKGRLQRLVAKDVQPPDPASIRV
LRGHQLPVTCLVISADDRFIFSASKDGSLIKWEVESGKRLCVVPGGKKGTEEQHMGHASH
VLCMAISSDSKYLATGDRNKLIMIWDTATCKRLHVFTGHRDAVSGLSFRKGTHQLYSASH
DRCVKVWNVTENAYVETLFGHQDVITGLDSLSRECCVTAGGRDGTVRLWKIPEESQLVFC
GHQGSIDCIQLINEEHMVSGADDGSVALWGVTKKKPLALARQAHGMQDAQGLQQPYWITA
VAALRNSDLLATGSHSTSVKLWKCSEGFRKLEPLLDIPLVGFVNSLNFSAAGDFLVAGIG
QEHRLGRWWRIKEAKNSICIIPLKRRVTVPSPEGPEGC
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgaggggccccgtctttgtggccatgtcctctctggccataagtaggactcggttctct
gctgtctccagaggctgccacctccagcccttcccggtggcaacggccgaatctcctcac
acgcccgtcctgcccaaacagccgcgccgcgtgcggcgcccgccctgccggggcggtgca
tgcccggtgtggggcggtgccgcccctgctgtcaccgccccctatcggtcagagctcgcc
ggctgccgcggctccgccaaccgggctatgttcccgggggccggtcccttgggcgtggga
gcaccaccggaggggcggggccagtgctcaggggcggggcccaccgccgagggagcgtgg
ctcggcactgacggggcggtgctgccaataggcgcggccggaggcgtggcctggccgcgg
gccgacagcagcgaggagcgggtgccacgtgcggcggcagcatggcggctgcggcgggag
gcaggagggccaaggccccgcgcggggcggcaggacggcggcggccgcgggcggcgtttc
gtcccgcaggtccccggcgccgaggggaggccgcgggtggcggccggccggccggtcgac
gaggaggtgtccagcgattctgagacggaaagcccgttgctggggcggcggcggcgggag
gcggtggcggcggaggaggaggtggaggagacgccgcaggagaagaagctgcgcctggcc
aaactttacctggagcagctccgccagcacgaggaggagcgggcggaggaggaggaggag
acccagccggcggatctcatcggcgaccggctgaaggaggacgtgctcgagcagaagggc
cggctgcagcgtctggtcgccaaggatgtgcagcctccggatccagccagcatccgtgtg
cttcggggacaccagctgcccgtcacctgcctggtcatctctgcagatgacaggttcatc
ttttctgcttctaaggacggctccctcatcaaatgggaggtggagagtgggaagaggctg
tgcgtggtgcctggggggaagaagggcaccgaggagcagcacatggggcatgcgtcccac
gtcctctgcatggccatctcatcagatagcaagtacctggccacgggagacaggaacaag
ctcatcatgatctgggacacagccacctgcaagcgcctgcacgtcttcactgggcaccgg
gatgctgtctcgggcctgtccttccggaagggcacgcaccagctgtacagtgcgtcccac
gaccgctgcgtcaaggtctggaatgtgacggaaaatgcttatgtggagacactgtttggg
caccaggatgtcatcacggggctggacagcctgagtcgggagtgctgtgtgacagcagga
ggacgggacggcaccgtgaggctctggaaaatccctgaggagtcgcagctcgtgttttgt
gggcaccagggctccatcgactgtatccagctcatcaatgaggagcacatggtgtcggga
gctgatgatgggtccgtggccctgtggggggtgacaaagaagaagccactggcacttgcc
cggcaggcacatggcatgcaggatgcccagggcctgcagcagccgtactggatcacagcg
gtggccgccctgcgaaacagtgacctcctggctacaggctcccacagcaccagcgtgaag
ctctggaagtgcagtgagggatttcggaagctggagcctctcttggacatccccttggtg
ggttttgtcaacagcctcaacttctctgcagccggtgacttcctggtggccggcattggg
caggagcaccggcttggccggtggtggagaatcaaagaagccaaaaacagcatctgcatc
atcccactgaagcggagggtcacagttcctagccccgaaggccctgagggctgttag

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