KEGG   Strigops habroptila (Kakapo): 115614850
Entry
115614850         CDS       T08851                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115614850 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shab03041]
    115614850 (SF3A1)
Spliceosome [BR:shab03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115614850 (SF3A1)
 Complex B
    115614850 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    115614850 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 115614850
NCBI-ProteinID: XP_030358099
LinkDB
Position
11:complement(14191317..14205488)
AA seq 790 aa
MPAGPVQAMPPAQPAPPADSKPPEEEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVAR
NGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQT
AQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLT
QLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLLKLKKEAENPKEVLDQV
YYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEE
LGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTDEPPAQLDQDTQVQDMDEGSDDED
EGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPAS
KMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETA
IGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKE
KIGPSKPNEIPQPPPPSSASNPPASAQPITSVPRPPTMPPPVRAAVVSAVPVMPRPPMTS
VVRLPPGSVIATPMPPIIHTPRINVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPS
PAPMPPVHPPPPMEDEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLN
GQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHL
ALKERGGRKK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgccggcgggacccgtgcaggccatgccgcccgcgcagccagcgccgcccgccgacagc
aaaccgccagaagaggagccgaaagaggaagcagccccggccaagcctgtggttggaatt
atttaccctcctccagaagtcaggaatattgtggacaagactgccagcttcgtagccaga
aatggtcccgagtttgaagctcgaattcgtcagaatgagataaacaaccccaagttcaat
ttcctgaaccccaacgatccctaccatgcctactaccggcacaaagtcagcgagttcaaa
gagggcaaagcccaggagccctcggctgctattcccaaggtgatgcagcagcagcagact
gcccagcagcagctgccacagaaggtgcaggcccaggtgatccaggagacagtggttccc
aaagagcctcctccagagttcgagttcattgcggatcctccctccatctccgccttcgac
ctggacgtggtgaagctgacggcgcagtttgtggcgcgcaacgggcggcagttcctcacg
cagctcatgcagaaggagcagaggaactaccagtttgatttccttcgcccccagcacagc
ctcttcaactacttcacgaagctggttgagcagtacaccaagatcttgatcccacccaaa
ggtttgctcctcaaactcaagaaggaggctgaaaatcccaaggaagtccttgaccaggtg
tattacagagtggagtgggcaaagttccaggagcgagagaggaagaaggaggaggaggag
aaagaaaaggagcgtgtggcctatgcccagatcgactggcatgactttgtggtggtggaa
acagttgactttcagcccaatgagcaagggaatttccctcctcccaccactccggaagag
ctgggagctcggatcctgatccaggagcgttatgagaagtttggggaaagtgaggaggtg
gagatggaggtggagtcagatgaggaagatgaaaagcaagagaaaacagatgagccccca
gcgcagctggatcaggacacacaagtgcaggatatggatgagggctcagatgatgaagat
gaaggtcagaaggtgcctcctcctccagaaaccccgatgccaccacctcttcctcccaca
ccagaccaggtcattgtgaggaaggattacgatcccaaagcctcaaagccgttaccaccc
gccccagctccagacgagtatcttgtttcccccatcactggagagaagattcctgccagt
aaaatgcaggagcacatgaggattggcctcctggatcctcgatggctggagcagcgcgac
cgctccatccgggaaaagcagagcgatgatgaggtctatgccccaggtttggatattgaa
agcagcctgaagcagctggcggagcgccgtaccgatatctttggtgtggaagagactgcc
attggtaaaaagattggtgaagaggagatccagaaaccagaggaaaaggtgacctgggat
ggccactcaggcagcatggcccgcacacaacaggctgctcaggccaatatcaccctccaa
gagcagattgaagcgatccataaggccaaggggctggtgccagaagatgacagcaaggag
aagatcggtcccagcaaacccaatgagataccccagccaccccctccgtcatcagcatcg
aatccccctgctagtgctcagcccatcacatccgtgcctcgtccccccacgatgccccct
cccgtgcgtgctgctgtggtctctgcagtccccgtcatgcctcggccccccatgacgtcc
gtggtccgtttgcctccgggatctgtcatcgccaccccgatgccacccatcatccacacc
ccgcgcatcaacgtggtgcccatgcccccctctgctccccccatcatgagcccccgcccg
cctcccatgatcgtgccaacagcctttgttcctgctcctcccgtggctccggttccctcc
ccggcaccaatgcctcctgtgcacccacctccacccatggaggatgagcccgtctcgaag
aagctgaagagtgaggacagcctcatcccagaggaggagttcctgcgcaggaacaagggc
ccagtcacggtcaaagtccaggttcccaacatgcaggacaagacggaatggaagctgaac
ggccaagtgctggtgttcaccctgcccctctcagaccaggtgtctgttataaaggtgaag
atccacgaggccacagggatgccggctgggaagcagaagctgcaatatgagggcatcttc
atcaaggactcgaactctctggcctattacaacatgaccagtggctccctcatccacctg
gccctcaaagaaagaggaggcagaaagaaatag

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