Strigops habroptila (Kakapo): 115614892
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Entry
115614892 CDS
T08851
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K06243
laminin, beta 2
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04510
Focal adhesion
shab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115614892
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115614892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
Laminin_I
F5_F8_type_C
DUF7365
EzrA
Motif
Other DBs
NCBI-GeneID:
115614892
NCBI-ProteinID:
XP_030358226
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All DBs
Position
11:complement(35892932..35908185)
Genome browser
AA seq
2010 aa
AA seq
DB search
MGTGKMCLGSQALIQRLGAGGTGGGGSTKGSSSLNAIAGPRPAAGMLLPDRLRCSWRPSR
AGPGPSRGPPRDNSDTGRDGSAPSRAGWGTAQLVWGLGVRERQCALVCVQGWGMAMGVGT
PCHPGGRWDPTSPPDPASQCCPPGMWPCWSWEKPGTSSLHPIAIPCTPLQCLRVPPRQSL
RLPMDLLALTLLLAGIPSVWGQQEPDPSHGCARGSCYPATGNLLVGRAPRLSATSTCGLH
GPQEYCIVSHLQDSEKCFTCDSRDPSLPQSHRIENVIYLSGPRARRTWWQAENGVEHVSI
QLDLEAEFHFTHLIMKFKTFRPAAMLVERSADFGRSWKVYRYFAYNCSKLFPGIPDQPSG
LVDEVLCDQRYSEIEPSSHGEVIFKVLDPSIPVADPYSPDIQDLLRVTNLRVNLTKLHTL
GDNLLDTRREVLHKYYYAVDELVLRGSCFCHGHAAQCAPAPGAPAAAVPSMVHGRCVCEH
HTQGLNCERCEDFYHDLPWRPAEGSSTNACRRCDCNEHSQRCHFDMAVFLATGNTSGAVC
DGCQHNTMGRRCHLCKPFYYRHPRADIRAPTACAPCDCDPAGSLDGGACDGHTDVALGMI
AGQCRCKENVAGPRCDRCRHGAYGLSHGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCK
RFVAGRSCSQCVPEFWGLSYDVGGCRPCDCDFGGAYSNRCSMEDGACPCRPHLMGRQCDQ
VQPGFFCAPLDYYTYEAEQAIGHSHGHGQLPGAIRTEVPQDCLEYDPAEPGARKGRPRHQ
RSPPRTPHPRSAPRRGRQQPPKPDVEEVVRDGAGRMVTWTGSGFARVRDGAGLTFRVDNV
PYPMDYELLVRYEPESAEDWEAVVSVSSQVLPTSPRCGNLLPSEQMYRESLPHSQRYVLL
SRPFCFEPSTPYEVTMRLQRAGVTQRHPSAFILIDSLVLLPRVSELPGLHGAEAAPRLEE
LERYRCLEAFRMAPPPALAQACARLVCSVSALMHGGALPCQCDPQGSRSSECQPQGGQCQ
CKPHVLGRRCDRCSPGSYGFGPLGCSPCACSAEGSVSRLCDAVSGQCRCQPGAVGRRCDQ
CQPGHWGFPSCRPCQCNGHAEECDPRTGSCLRCRDHTAGRHCERCQDGYYGDPVLGSGQQ
CRPCPCPSYPGTRHYHGSACHADQETHHIVCLCAPGYAGPRCDRCSPGYFGAPETEGGVC
RPCQCNNNIDASDPGACDPRTGHCLRCLYHTAGPRCTLCQPGYYGNALQRSCRRCGCDPR
GTLDSHCTAGSCACDRGTGACACRPNVVGKSCDRCAPHFWSLGGPGGCEPCGCHPTHSLH
PACDAVTGQCQCRPGFGGRVCSQCQEHHWGDPEQECRACDCEPLGAESPQCEQASGQCRC
RPGFGGQRCDRCQRGYQEAFPRCSPCHPCFGQWDPALGRLWDGLRRLGAQAQALRDGGSL
SPLSPRRLRALQEALGRVERLLGEGGSAGGPLLDALPGRLDGTRMELDDFWKQLQDLEQH
LDELAKADVRHHDRIAVLSRELGGLNRTASHLQTLLSTVAAAGFSESYRSILASAEGSRL
AEVVANGTAGEVAGAQAARRAAERALRQRGDAFRRGTAAARKSLREAQKRVMGLSAAGVN
EKICGAPGHRSCKQAPCGGALCRDDAGMRHCGGTGCMGALPVSARALSSARNASQQLEVA
LGQLGVVAQKTQEVQELARGARSRAEEALGRSQAARSRAEKATAQLRDFIHRIKAFLAEE
GADPGSIELVARQVLNISLPSSPGRIQELLQEMRESISQLEGVDVVLNSTAQGLAVAQGL
LEQGRDARERAEGVRDELLGTQRALEVAQAQATAAGSALRSARDAIRVAESRAKEAERRL
QALEGKESRAQRRLRELGQRVTTLQEQHQDTRRMVQRAKDGAQRVTATAGLLSQDLAQVT
QRYTVLKSRVSALDGVAGSALQRVTRLTAEARDLLDKASTSKRKLEELEQHFGANERVMA
AKATRLQALEQQVWGLLEEIRERANAYATC
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
atggggacaggaaagatgtgtttgggcagccaggctttgatccagcggctgggagcgggc
ggcaccggcggaggaggaagcacaaaaggcagctccagcctaaatgcaatagcgggaccc
cggccagcggcggggatgctgctgcccgaccggctccggtgctcctggcgcccatcccgg
gctggccccggcccgtcgcggggaccccccagggacaacagtgacactgggagggatgga
tccgccccgagcagggcaggatggggcacagcacagctcgtgtggggcctgggagtgcgg
gaacggcagtgtgccctggtctgtgtgcagggatggggcatggccatgggggtgggcacc
ccgtgccaccctgggggacgttgggacccaacttccccacctgatcccgcttcccagtgc
tgtcccccgggtatgtggccatgctggagctgggagaagccaggcaccagttccctgcac
cccattgccatcccctgtaccccactgcagtgtctccgtgtcccccctaggcagagcctg
cggctgcccatggacctcctggcactcactctcctcctggcggggataccatcagtgtgg
ggccagcaggagcctgaccccagccatggatgtgcccgcgggagctgctacccggccacc
gggaacctgctggtggggcgagccccacgcctgagcgccacctccacgtgcgggctgcac
gggccgcaggagtactgcatcgtcagccacctccaggactcggagaaatgcttcacctgc
gactcgcgggacccgtccctgccccagagccaccgcatcgagaacgtcatctacctgagc
ggcccccgcgcgcggcggacgtggtggcaggccgagaacggcgtggagcacgtcagcatc
cagctggacctggaggccgagttccacttcacacacctcatcatgaagtttaagacgttc
cggcccgcggccatgctggtggagcgctcggctgacttcgggcgcagctggaaggtctat
cggtacttcgcctacaactgctccaagctcttccccggcattcccgaccagccctcgggg
ctggtggacgaggtgctgtgcgaccagcgctactccgagatcgagccctccagccatggg
gaggtcatcttcaaggtgctggacccctccatcccggtggcggatccctacagcccggac
atccaggacctgctgcgcgtcaccaacctgcgggtgaacctcaccaagctgcacacgctg
ggggacaacctgctggacacgcggcgcgaggtgctgcacaagtactactacgccgtggat
gagctggtgctgcgcgggagctgcttctgccacggacacgctgcccagtgcgcgccggca
cccggagccccggcggccgccgtgcccagcatggtccatgggcgctgcgtctgcgagcac
cacacgcaggggctgaactgtgagcgctgcgaggacttctaccacgacctgccctggcgc
ccggccgagggctccagcaccaacgcctgccgccgctgcgactgcaacgagcactcgcag
cgctgccacttcgacatggccgtcttcctggccaccggcaacaccagcggggccgtgtgt
gacggctgccagcacaacaccatgggccgccgctgccacctctgcaagcccttctactac
cggcacccgcgcgccgacatccgcgcccccaccgcctgcgccccctgtgactgtgacccg
gcgggctcgctggacggaggggcctgtgacgggcacacggacgtggcgctgggcatgatc
gcagggcagtgccgctgcaaggagaacgtggccggtccccgctgcgaccgctgccggcac
ggtgcctatgggctcagccacggagacccgcagggatgccagccgtgcaggtgtgaccca
cggggcacggtggccggcagctccccctgcgaccccatcagcggggactgctactgcaaa
cgcttcgtggccgggcgctcctgcagccagtgcgtgcctgagttctggggcctgagctac
gacgtggggggctgccggccctgcgactgcgacttcgggggagcctacagcaaccggtgc
tccatggaggacggggcttgtccctgccgtccccatctcatggggcgtcagtgcgaccag
gtacagcccggcttcttctgcgccccccttgactactacacctacgaggccgagcaggcc
attgggcacagccacggccatggccagctcccgggtgccatccgcacggaggtgccccag
gactgcctggaatacgaccctgcggagccgggggcacgaaagggccgcccgcggcaccaa
cgcagccccccccggaccccccatccccgcagcgccccgcgccgcggccgccagcagccc
cccaagccggacgtggaggaggtggtgcgggacggcgccgggcgcatggtgacctggacg
ggctccgggttcgcccgggtgcgggatggagctgggctgaccttccgcgtggacaacgtg
ccctaccccatggactacgagctgctggtgcgctacgagccggagtcagcagaggactgg
gaggccgtggtcagcgtcagctcccaagtgctgcccaccagccctcgctgcgggaacctg
ctgccctccgagcagatgtaccgcgagagcctgccccatagccagaggtacgtgttgctg
tcccggcccttctgcttcgagcccagcaccccctatgaggtgaccatgcggcttcagcgg
gccggtgtcacccagcgccaccccagcgccttcatcctcatcgactcgctggtgctgctg
ccgcgggtgtcggagctgccggggctgcacggggccgaggcggcgccgcggctggaggag
ctggagcggtaccggtgcctggaggcgttccgcatggccccgccgcccgccctggcgcag
gcctgcgcccgcctggtctgcagcgtgtctgccctgatgcacggcggggccctgccctgc
cagtgcgacccgcagggctcccgcagcagcgagtgccagccccagggcgggcagtgccag
tgcaagccccacgtcctcggccggcgctgtgaccgctgctccccgggcagctacggcttc
gggccgctgggctgcagcccctgcgcctgctccgcggagggctcggtgtcccggctgtgc
gatgcggtgagcgggcagtgccggtgccagcccggcgccgtgggccggcgctgtgaccag
tgccagcccggccactggggcttcccgtcctgccggccctgccagtgtaacgggcacgcc
gaggagtgcgacccgcgcacgggcagctgcctgcgctgccgcgaccacaccgccggccgg
cactgcgagaggtgccaggatggttactatggggacccagtgctgggctcggggcagcag
tgccggccctgcccctgccccagctaccctggcacacggcactaccacgggagcgcctgc
cacgctgaccaggagacccaccacatcgtctgcctctgcgcacctggatacgccgggccc
cgctgcgaccgctgctccccgggatacttcggagcaccggagacggagggaggcgtgtgc
cggccctgccagtgcaacaacaacattgacgccagcgacccgggcgcctgtgacccccgc
accgggcactgcctgcgctgcctgtaccacaccgcggggccccgctgcaccctctgccag
cccggatactatggcaatgccctgcagcgcagctgccggcgctgcggctgtgacccgcgg
ggaaccctggattcgcactgcaccgccggctcctgcgcctgtgaccgcggcaccggcgcc
tgcgcctgccggcccaacgtggtgggcaagagctgcgaccgctgcgcaccccacttctgg
agcctgggggggccagggggctgcgagccctgtggatgccaccccacgcactccctgcac
cctgcctgcgatgcggtgacggggcagtgccagtgccggcccggcttcggcggccgcgtc
tgctcccagtgccaggagcatcactggggagaccccgagcaggagtgccgagcctgtgac
tgcgagccgctgggtgctgagagcccgcagtgcgagcaggccagcgggcagtgccggtgc
cggccgggcttcggtgggcagcgctgcgaccgctgccagcgcggctaccaggaggcattc
ccgcgctgctcaccctgccacccctgcttcgggcagtgggacccggccctgggccgcctg
tgggacgggctgcggcgcctcggggcgcaggcgcaggcgctgcgggacggggggtccctg
tccccactcagcccccgccgcctgcgggcgctgcaggaggcgctggggcgcgtggagcgg
ctgctgggtgaggggggcagcgccgggggacccctcctcgacgcgctgcccgggcggctg
gatggcaccaggatggagctggatgacttctggaagcagctccaagacctggagcaacat
ctggatgagctggcgaaggcagatgtgcggcaccacgaccggatagctgtgctgagccgt
gagctggggggtctcaaccgaaccgcctcccacctccaaaccctcctcagcaccgtggcg
gcggccggattcagtgagtcctaccgcagcattctggcatcagcggagggctcgcggctg
gcggaggtggtggccaatggcactgctggtgaggtggccggggcacaggcggcgcggcgg
gcggcagagcgggcgctgcggcagcggggagacgcgttccgccggggcaccgccgcggca
cgcaaatccctgcgtgaggcacagaaacgggtgatggggctcagcgctgccggcgtcaat
gagaagatctgtggagcacccgggcaccggagctgcaagcaagcgccttgtggaggagcc
ttgtgccgggatgatgcagggatgcggcattgcggtggcacagggtgcatgggggcactg
cctgtctcggctcgagccctgagcagtgcccgtaatgcatcccagcagctggaggtggcc
ctggggcagctgggtgtcgtggcacagaagacgcaggaggtgcaggagctggcgcggggc
gcacggagccgggcagaggaggcactggggcgctcacaggccgcccgcagccgcgcagag
aaggcgacagcccagctgagggacttcatccacagaatcaaggccttcctggcagaggag
ggagctgacccaggcagcatcgagctggtggcccggcaagtgttgaacatctccctgccc
agcagccccggccggatccaggagctgctccaagagatgcgggagagcatcagccagctg
gaaggggtggacgtggtgctcaacagcacggcacaggggctggctgtggcacaggggctg
ctggagcagggacgggatgccagggagcgagcggagggtgtgagggatgagctgctgggg
acacagcgggcgctggaggtggcacaggcacaggcgacggcagcggggagtgccctgcgg
agcgccagggatgccatccgggtggctgagagcagagccaaggaggcggagcgcaggctg
caggcgctggaggggaaggagtcacgggcgcagcggcggctgcgggagctggggcagcgc
gtcaccacgctgcaggagcagcaccaggacacccgccgcatggtgcagcgagccaaggac
ggggcgcagcgtgtcaccgccactgccgggttgctcagccaggacctggcgcaggtgacg
cagcgctacactgtgctgaagagccgggtgagcgcgctggatggggtggccggcagcgcc
ctgcagcgtgtgacacggctgacggccgaggcacgggacctcctggacaaggccagcacc
agcaagaggaagctggaagagctggagcagcacttcggggccaatgagcgggtgatggca
gcgaaggcgacgcggctgcaggcgttggagcagcaggtctgggggctgctggaggagatc
cgggagagagccaacgcttacgccacctgctag
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