Strigops habroptila (Kakapo): 115614969
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Entry
115614969 CDS
T08851
Symbol
SOGA1
Name
(RefSeq) protein SOGA1 isoform X2
KO
K27704
microtubule cross-linking factor
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shab03036
]
115614969 (SOGA1)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
115614969 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TPR_MLP1_2
Striatin
TSC22
Motif
Other DBs
NCBI-GeneID:
115614969
NCBI-ProteinID:
XP_030358380
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All DBs
Position
13:2969573..2987899
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AA seq
1462 aa
AA seq
DB search
MLEMRDVYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRVAQTGQVDGELIHS
LEQDVKVAKDVSVRLHNELEAVEKKRIRLEEENEDLRQRLIETELAKQVVQNEMDKLREN
SLKKRGSRSIGKTEKKPSVQEDSADLKCQLHFAKEESALMCKKLTKLAKENDGMKEELLK
YRSLYGDLDSSLSVEELADSPHSREAELKVHLKLVEEEANILSRRIVELEVENRGLRAEM
DDMKGQGDRELPGQDARFLAGLAGCGDTGDTVAELRRHLQFVEEEAELLRRSLLELEDQN
KLLLTELSKYKSEHDLDVTLSEDSCSVVSEPSQEELATAKVQISELSGKVKKLQYENRVL
LSNLQRCDLASCQTTRPMLETDAEAGDSAQCIPTTGWRDGTGSSEADVLGGGKVPDGPAK
LLKPKDLETLLGIRDQAVLVSKAINILISDANGFTSGLKACLDNECVGGLLGEAVGSGGE
SPSDAKLMNVLLMRLGVLQQDLGCFVRKVDHLTGSLKEHTDSFSFSGASSHDATKEGLQK
EHASDFQQPDFRDADPYRMPHAKDTDPTQPRSYRTCRPEENDSYATEIKELQLVLSEANE
SLRGLQEQLSQERQLRKDEVDNFSQKICQLKEDHQKALLRREFELQSLNLQRRLEQKFWS
QEKNLLVQESQQFRQSFLLLFMKLKWFLKRWRQGKMVHSEGEDFLEVNSMKELYLLLEEE
ELAPQQQADNKMCTGDTWTPNTPNECIKTLAEMKVTLQELCTELREERRGASELQQQFTK
AKAAWEMERAELKCHIAQLESKAGKGITERALPDWKVALKREREEHQHLLAESYSAVMDL
TKQLQISEKNWNQEKVELLARFKEEQQQAEQQAKDLQNKINQLQKGANPWALKHSEMEKH
GSNWKEALNEKITDKETISEAEAKGTNLKRTKSVSSMSEFESLLDCSPYLPGKSTPGLGD
HSRGKKASAAAQLLPNGIWDSASLPPSHCTYVNIEQPAPDSLAKEKLGISSWDYSRAHSL
SGHDPAQKQMQRSYTAPDKTGIRIYYSPPVVRRLEAPLVHNKEGKIMIEPGFLFTMAKPK
EPEESASAESTYSQWLCNFSKQQRELLDAGTVESAVPPVPHFPPSLHDLEISGNMSDDMK
EITNCVRQAIRSSSLERKVKSTSSQTVGLTHVGTQTIQTVSVGLQTDLPRGSSMHSKSWS
PRSSSLMSVRSKQISSSLDKVHSRIERPCCSPKYGSPKLQRRSSSKLDASKDRSLWNLHQ
SKQNGSAWARSTTTRDSPVLSNINDGLSSLFSVVEHAGSTESIWKLGCPESSRAKPEAPK
YGLVQEFFRNVCGRAQSPTAPPEKKETPGEEGSKRAEHPGPATHHPAESISRSLNKKVLK
QSSCEDPKPSSPGQGGKDAALRDPDLISAIASEDMACDCSSQSLTSCFARPSRSAVRHSP
SKCKLHPMDPPRAEEKPGALSE
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgctggagatgagggacgtctacatggaggaggacgtgtaccagctgcaggagctccgt
cagcagctggaccaggccagcaagacctgccgcatcctgcagtaccggctgcgcaaggcg
gagcggcgcagcctgcgcgtggcacagaccgggcaggtggatggggagctcatccacagc
ctcgagcaggacgtcaaggtggccaaggacgtgtccgtgcggctccacaatgagctggag
gcagtggagaagaagaggatcaggctggaggaggagaacgaggacctgcgccagcggctc
atcgagaccgagctggccaagcaggtggtgcagaacgagatggacaagctccgagagaat
tccctgaagaagcgggggtctcgctccatcggaaagaccgagaagaaaccatcagtgcag
gaggacagtgcagacctcaagtgccagctgcattttgccaaggaggagtcagccctgatg
tgcaagaagctgaccaagctggccaaggagaacgacggcatgaaggaggagttgctgaag
tacaggtccctgtatggggacctcgacagctccctctcggtggaggagctggccgactct
ccccactcccgggaggctgagctgaaggtccacctcaagctggtggaggaggaagccaac
atcctcagccggaggatagtggagctggaggtggagaaccgcgggctgcgggcggagatg
gacgacatgaagggccagggggacagggagctgccggggcaggacgcgcggttcctggcg
ggcctcgcgggctgcggggacacgggggacacggtggcggagctgcgccggcacctgcag
ttcgtggaggaggaggccgagctgctgagacgctcgctgctggagctggaggaccagaac
aagctgctcctgactgagctgagcaagtacaagtcggagcacgacctggacgtgacgctg
tcggaggacagctgctcggtggtcagcgagccctcgcaggaggagctggccacggccaag
gtgcagatcagcgagctgagcggcaaggtgaagaagctgcagtacgagaaccgcgtgctg
ctctccaacctgcagcgctgcgacctcgcctcctgccagaccacccggcccatgctggag
accgacgccgaggccggcgactcggcgcagtgcatccccaccaccggctggagggacggc
acgggcagcagcgaagccgacgtgctcggtggtgggaaggtgcccgatggtccagccaag
ctgctcaagcccaaggatttggagaccttgctgggcatccgggaccaagcggtgcttgtc
agcaaagcgatcaacatcttgatttcggatgccaacggcttcacctctgggctgaaggct
tgcttggacaacgagtgtgttggggggctgctgggtgaggcggtgggcagcggtggtgag
agccccagcgatgccaagctgatgaacgtgctcctcatgcggctgggcgtgctccagcag
gacctgggctgcttcgtgaggaaggtggatcacctcaccggcagcctcaaggagcacacg
gactctttcagcttctccggcgccagcagccacgacgccaccaaagaggggctgcagaag
gagcatgcctccgacttccagcagcctgattttagggacgccgacccttaccgcatgccc
cacgccaaggacacggaccccacacagccccggagctacaggacctgccggcccgaggag
aacgactcctacgccaccgagataaaggagctgcagctggtgctgtcggaggccaacgag
agcctgcgggggctgcaggagcagctctcccaggagaggcagctgaggaaggacgaggtg
gacaacttctcacagaagatctgccagctgaaggaggaccaccagaaagcactgctgcgg
cgggagttcgagctgcagagcctgaacctgcagaggcggctggagcagaagttctggagc
caggagaagaacctgctggtgcaggagtcgcagcagttcaggcagagcttcctcctgctc
ttcatgaagctcaagtggttcctcaagcgctggcgccagggcaagatggtacacagcgag
ggcgaggactttttggaggtgaacagcatgaaggagctgtacctgctgctggaggaggag
gagcttgccccacagcagcaggcagacaacaagatgtgcactggggacacctggaccccc
aacacgcccaacgagtgcatcaagacgctggcggagatgaaggtgaccctgcaggagctg
tgcacagagctgcgggaggagcggcgcggtgccagcgagctccagcagcagttcaccaag
gccaaggctgcctgggagatggagcgcgccgagctcaagtgccacatcgcccagctggag
tcgaaggcaggcaaagggatcacagagcgtgcgctgccggattggaaggtggcgttgaag
agggagcgtgaggagcaccagcatctcctagccgagtcctacagcgctgtcatggacctc
accaagcagctgcagatcagcgagaagaactggaaccaggagaaggtggagctgctggcc
cgcttcaaggaggagcagcagcaggcagagcagcaagcaaaggacctgcagaacaaaatc
aaccagttgcagaaaggagccaacccatgggcactgaagcactctgaaatggagaagcac
ggcagcaactggaaagaggctctcaatgaaaaaatcacagacaaagagacaatctctgaa
gcagaagccaagggaaccaacctcaaaaggaccaagtctgtttcctccatgtcagagttt
gaaagcttgcttgactgttctccctacctccctggaaagagcacgccagggttgggcgac
cattcccggggcaaaaaggcatctgcagctgcccagctgctgcccaacgggatctgggac
agcgccagccttcctccctcacactgtacatatgtgaatatcgagcaacctgcccccgac
agcctggccaaggagaagctgggcatctcctcctgggactactcgcgggcacacagcctc
tccgggcacgacccagcccagaagcagatgcagaggagctacacagcgcccgacaagacg
gggatccgcatctactacagcccaccggtggtgcggcggctggaggcgcctctggtgcac
aacaaagaaggaaagatcatgattgaacccggtttcttgttcaccatggccaagccgaag
gagccagaggagtcggccagcgctgagagcacctacagccagtggctctgcaacttctcc
aagcagcagcgggagctgctggacgctggcacggtggagagcgcggtgccaccggtgccc
cacttccccccatcgctgcacgacctggagatctctggcaacatgagcgacgacatgaag
gagatcaccaactgcgtgcggcaggccatccgctccagctcgctggagaggaaggtgaag
agcacctccagccagacggtggggctgacccacgtggggacacagaccatccagacggtg
agcgtggggctgcagactgacctgccgcgcggcagcagcatgcacagcaagagctggtcc
ccgcgcagctcctccctcatgtccgtgcgcagcaagcagatctcctcctccctggataag
gtgcactccaggattgagcggccgtgctgctccccaaaatacggctctccaaagctccag
aggaggtcttcctccaagctggatgcctctaaggacaggagcctctggaacctgcaccag
agcaagcagaacggctctgcctgggcccgctccaccaccacccgcgacagccccgtcctc
agcaacatcaatgacggcttgtccagcttgttcagcgtggtggagcacgcgggcagcacc
gagtccatctggaagctgggctgccccgagagcagccgggccaagcccgaagcacccaag
tacggcctcgtgcaggagttcttcaggaacgtctgcgggcgggcgcagagccccactgcc
cccccagagaagaaggagaccccaggggaggagggcagcaaaagagctgagcaccccggc
ccggccacgcaccacccggcagagagcatctcccgcagcttgaacaagaaagtgctcaag
cagagcagctgcgaggaccccaagccctcgtcccccgggcaggggggtaaggacgcagcc
ctgcgggaccccgacctcatctcggccatagccagcgaggacatggcgtgtgactgcagc
tcccagtccctcacctcctgctttgcgcggccatcccgctccgccgtccgccattcccca
tccaagtgcaaactgcaccccatggacccccccagggcggaggagaagccgggggccttg
agtgagtga
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integrated database retrieval system