Strigops habroptila (Kakapo): 115615122
Help
Entry
115615122 CDS
T08851
Symbol
ARFGEF1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115615122 (ARFGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115615122 (ARFGEF1)
Membrane trafficking [BR:
shab04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
115615122 (ARFGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
115615122
NCBI-ProteinID:
XP_030358757
LinkDB
All DBs
Position
1:34915260..35010681
Genome browser
AA seq
1860 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAETEKQSPPHGEAKP
GSSTLPPVKSKTSFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGNAPDST
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQQHHLQQSPVSHHE
PESPQLRHIPTQTDQLSKEHERELDHSTNDVDKNLQEDIEAENGSDISSAENEQTEADQA
TAAESNQCVFLFCGGEGKDLSKSDGGTYDGESNECEEKAQEIVESIVQEMVNIVVGDVEG
TAESAGGDGTVVTLEDGSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSS
GPTPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNA
GPVFRTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFF
KEIFLYILETSTSSFDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLS
KIAQGRGSQELGMSNVQELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPTE
QDSNETKHPETINRYGSLNSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGID
LFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYV
DQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVL
AYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKET
KELTIPTKSSKQSVASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRP
MFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFNIQLERDAYVQALARFT
LLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPR
YISGTVRGREGSFTGTKDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDR
IFTGSTRLDGNAIVDFVRWLCAVSMDELLSATHPRMFSLQKIVEISYYNMGRIRLQWSRI
WEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRN
RSPTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTI
VFEKHFPATIDSFQDAVKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSD
DMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDL
FRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYW
CVQQDNEQLARSGTNCLENVVILNGEKFTLEIWDKTCTCMLDIFKTTIPHALLTWRPVSG
EFGSVSPSDAKEKLDTISQKSVDIHDSIQPRSSDGRPYQPNTGSTVGEEMSKTRPTAKFP
EQKLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVHVDTQDQG
MYRFLTSQQLFKLLDCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLAC
GLRILFRMYMDESRTSAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVL
KISDERFKAHASFYYPLLCEIMQFDLIPELRAVLRRFFLRIGVVFQISQPPEQESGLSKQ
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagggaagaagacgaaaaacatgttcctgacccgggccctggaaaagatcctg
gccgacaaggaggtgaagaaggcgcatcactcccagctgcgcaaagcctgcgaggtggcc
ctagaggaaataaaggctgaaacagaaaagcaaagcccccctcatggagaagcaaagcct
ggttcaagcactcttccacctgtgaaatcaaagacaagcttcattgaagcagacaaatac
ttcttaccatttgaattggcatgccagtcgaagtgtcccaggattgtcagtacatctcta
gattgtttacagaaacttatagcatatgggcacttgacagggaatgctccagacagtaca
actccaggcaaaaaattaattgatagaattattgagacaatatgtggctgtttccaaggc
cctcaaacagacgaaggggttcagctacaaataataaaggctttgctcactgcagtaaca
tctcaacacatagaaatccacgaaggaacagtgctacaggctgtaagaacatgttacaat
atctatctagcaagcaaaaatcttataaatcaaaccacagccaaggccactctaacacaa
atgctgaatgtcatttttgcacgtatggaaaatcaagcacttcaggaagcaaaacagatg
gaaaaggaaagacacagacagcaacaccatctacagcagtctccagtaagccatcatgag
cctgagtcacctcagttgagacatattccaacacagactgatcagctgtctaaagaacat
gagagagagcttgatcacagcacaaatgatgtggacaagaaccttcaagaagatatagag
gcagaaaatggatctgatatttctagtgctgaaaatgaacagacagaagctgaccaagcc
acagcagcagaaagtaatcagtgtgtatttctcttttgtggaggggagggaaaagatctt
tctaaatctgatggaggaacatatgatggtgaaagcaatgagtgtgaagagaaggcgcaa
gaaattgtagaaagtattgtgcaggaaatggtgaacatagtagttggagatgtggaaggg
actgctgaaagtgcaggtggtgatggtacagttgtaacgttagaggatggcagtgacagt
gaaaacattcaggcaaatggaattccagggactccaatttctgttgcttatacaccatct
ttacctgatgacagattatctgtctcttccaacgacactcaggaatctggaaattcttca
ggacctacccctggtgctaagttttcccacattttacaaaaggatgccttccttgtattc
aggtcactttgtaaactctccatgaagcccctgtcagatggaccgccagatccaaaatct
catgaactgcgatcaaagattctttcattgcagttgcttctgtccattctgcaaaatgca
ggacctgtcttcagaacaaatgagatgtttattaatgctattaagcagtacctttgtgtt
gcactgtcaaaaaatggagtctcatcagttccagaagtttttgaactttcactttccata
tttcttaccctcctctcgaactttaagactcatctaaagatgcagatcgaggttttcttc
aaagaaatattcctgtatatcttggaaacctctactagctcgtttgatcataaatggatg
gttatacaaacgctgaccaggatatgcgcagatgcccagagtgttgttgacatctatgtg
aactatgattgtgatttaaatgcagcaaatatatttgaaaggctggttaatgacctatca
aagattgctcaaggaaggggtagccaagaacttggcatgtccaatgttcaggaattaagt
ttgagaaaaaaaggattggaatgcttagtatcgatcttgaagtgcatggtggagtggagt
aaggatcagtatgtaaatcccaactctcagacaacacttggccaagaaaaacccacagaa
caggacagcaatgaaaccaaacaccctgagacaattaacagatatggaagcttaaactcc
ttggattctactgcttcatctggaattggcagttatagcacacagatgtctggcactgac
aacccagagcagtttgaggtcctaaagcaacaaaaggaaataatagaacaaggaattgac
ttattcaataagaaaccaaagagggggattcagtacctgcaagaacaaggaatgcttggc
actacccctgaagatattgctcagttcttgcatcaagaggaaagattagattcaactcag
gttggggagttcctgggagacaatgataaatttaacaaagaagtcatgtatgcatatgta
gaccaacacgacttctcaggaaaagattttgtttcagctctgcgtatgtttctagaggga
tttcgtcttccaggagaggctcaaaaaattgatcgcctcatggagaaatttgctgctaga
tatttagaatgtaatcaagggcaaactctttttgctagtgcagatactgcgtatgtttta
gcttattcaattatcatgttgacaacagatcttcacagtccacaggttaagaataaaatg
acaaaagaacagtatattaaaatgaataggggtatcaatgacagtaaagatctccctgaa
gaatatttgtctgctatatataatgaaatagctggaaagaagatttcaatgaaagaaaca
aaagaattaacaatacccacaaaatccagtaaacaaagtgttgctagtgaaaaacagaga
agacttctatataacttggaaatggaacaaatggctaaaacagctaaagcacttatggag
gcagtgagccacgttcaggcaccttttactagtgcaacacacctggagcatgtgagaccc
atgttcaagttggcatggacaccctttctggctgcattcagtgtgggtctgcaggactgt
gatgacacagaagtcgcctctctttgtttggagggtatacgatgtgcgatccgcattgct
tgcattttcaacattcagcttgaaagagatgcctatgtccaagcattagcaagatttacg
ttacttacagtgagttctggtattactgaaatgaagcagaagaatattgacacaattaaa
actctcatcacggtggcgcatacagatggaaactatttaggaaattcctggcatgagatt
ctgaaatgcatcagtcaacttgaactggcacagttaataggaactggagtaaaaccccgc
tacatctcagggacagtgcgtggcagggaaggttcttttactggaacaaaggatcaggca
cctgatgaatttgtggggctgggactggttggtggaaatgtggattggaagcagatagca
agtattcaggaatccattggtgaaactagctcccaaagtgttgtcgttgctgtagacaga
atatttacgggatctacaaggttggatggaaatgctattgtggatttcgttcgctggctt
tgtgctgtatctatggatgaactgctgtctgctacccaccctcgaatgtttagtctgcag
aagatagtagagatttcttactacaacatgggccggataaggctacagtggtctagaatc
tgggaagttattggagatcattttaataaggttggctgcaatcccaatgaagatgtagct
atttttgcagtagactcattaaggcagttatcaatgaaattcttagaaaaaggagagctt
gctaatttccgattccagaaggacttcctaagaccttttgaacatatcatgaagagaaac
aggtctcctactattcgagacatggttgtacgctgtattgcacagatggtaaattcccag
gctgctaacattcgttctggctggaaaaacattttttcagtatttcatctggcagcttca
gatcaggatgaaagtatagtggaacttgcattccagactacaggacacattgtcacaatt
gtgtttgagaaacacttcccagcaaccatagattctttccaggatgcagtaaagtgcttg
tctgaatttgcctgcaatgcagcatttccagataccagtatggaagcgattcgcctcatt
cgccactgtgcaaaatatgtatctgacagacctcaggcgtttaaggaatacacaagtgat
gatatgaatgtagctcccgaagacagagtgtgggtgcgaggatggttcccaattctgttt
gagttgtcgtgtatcatcaatagatgcaaattagatgtaagaaccaggggcttaacagta
atgtttgaaataatgaagacatatggccatacttatgaaaaacactggtggcaagatttg
tttcggattgtcttcaggatatttgacaacatgaaactgccagaacagcagactgagaaa
gctgaatggatgacaactacttgcaaccacgcactttatgcaatatgtgatgtattcaca
cagtatttagaagtacttagtgatgttcttttggacgatatatttgcacagctgtactgg
tgtgtgcagcaagacaatgaacaactggcacggtctggtacaaactgtttggagaatgtt
gtcatcctgaatggtgaaaagtttaccctagaaatctgggataaaacttgtacttgcatg
ctggatattttcaagactacaatccctcacgcgctgctgacttggcgaccagtcagtggg
gagtttggctctgtgtctccctctgatgcaaaggaaaaactggataccatctcacagaag
tcagtagatattcatgattctattcagcctagatcttcagatggaaggccatatcagccc
aacacagggtccacagtaggtgaagaaatgagtaaaaccaggccaacagcaaaatttcca
gaacagaagttatttgctgctcttttaatcaaatgtgttgtacaactggaactcattcag
actatcgacaacattgtgttcttcccagcaactagcaaaaaagaggatgcggagaatcta
gcagcagcacaaagagatgcagtagactttgatgtccatgtggatacacaagatcaaggg
atgtatcgttttctaacgtcacagcagcttttcaaactcctcgattgtctgttggaatct
caccgatttgctaaagcatttaactccaacaatgaacagagaactgctctctggaaagca
ggttttaaaggcaaatcaaagcctaatcttctgaaacaggagactagcagtcttgcctgt
gggctgcgcattctgttccgtatgtacatggatgaaagccgtaccagtgcatgggaggaa
gtccagcaaaggctactcaatgtctgcagcgaggctctgagttacttcctcactctgact
tcagaaagtcatcgggaagcctggactaatctcttactcttatttttgactaaagtcctg
aagataagtgatgaaaggttcaaggctcatgcctcattctactaccctctgttgtgtgaa
attatgcagtttgaccttattcctgaacttcgagctgttctacggaggtttttcctgcgg
attggtgtggttttccagatatcccaaccaccagaacaggagtctggactaagcaagcag
tag
DBGET
integrated database retrieval system
