Strigops habroptila (Kakapo): 115615237
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Entry
115615237 CDS
T08851
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115615237 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115615237 (TAF4)
03036 Chromosome and associated proteins [BR:
shab03036
]
115615237 (TAF4)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115615237 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
115615237 (TAF4)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115615237 (TAF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
115615237
NCBI-ProteinID:
XP_030359018
UniProt:
A0A672V2T0
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All DBs
Position
13:complement(12715728..12753634)
Genome browser
AA seq
1102 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANAQTESSSSSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGASEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTGSAAFPGTPVTANPAPAPAVAPLVNNGPGSVGKGNTVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPPPSIGTGAPTVTLVRPPIHTAGPTVAAAGAAT
QNGSNTVINSTISVGSFPAVATATVGSGASLQTSLVNSQSGSTVPAAPTTQVIKSESPKA
IVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGLPNVAPNPGGIPPAAPGTPTGMAKGTA
NTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQALAQMQAQAHAQSQPQNTMTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEAEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSAAVLLSSSV
QRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQSQKAGALIRPPQVTLTQ
TPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQLAAAQKNKLKEP
GGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRIL
EIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQKNISYKDDERYEQASDVRAQ
LKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRD
ANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRDL
IFCLENERETSHSLLLYKAFLK
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtctcagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccctagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcagcagcagcagcaagatgggactgagtgcccca
gagatcacaaaagcaggagcaggaggagtgcaagggggtgttattaaccataacaccagg
tcccagacttcagctctggatggagccaccacaacgagcaccagcaccaccactgcagca
gcaggagcatctgaagtcactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcaccatggcaactgccttgtccaccaggaatggcaagattgggaccacgacagtg
caaactttgaatgggagtaacgtggtgatgaactctcaccatacaggaagtgctgctttc
cctgggactccggtgaccgctaaccctgctcctgcccctgctgttgcccctctcgttaac
aatggacctggatctgtggggaagggaaatactgttaatgctgttttgccatcggcttcc
aacactgtcatccagacttctttccttaacactgctgtgtcctctgcatcttcctcctcg
cccacagttatctcctcgcagccaccaccgagcattgggactggggcgccgacggtgacg
ctcgtgcggccgccgatccacacagcaggacccacagtagctgcagctggggcagccact
cagaatgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgtt
gctacagccactgtgggatctggagcttccctccagacatcacttgtgaacagccagtct
ggttccactgtgccagcagctcccaccacgcaggtcatcaaatctgagtctcctaaagct
atagtccaagcagtatcccaacagcagacgctggctactggtggccagcccagtactaca
gggggtaacatgattattgggcaaactatgcaagccgggctccccaatgttgctcccaat
cctggtgggatacctcctgcagctcctggcacccccacgggaatggctaaaggcactgcc
aatacggtggcacaaagtctgccaaggactccaacagcaactacgagtggaataagagca
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccaactaac
attcagaattttcagttaccaccaggcatggtccttgtgcgtagtgagaacgggcagttg
ctgatgatccctcaacaagccttggcacagatgcaagcacaggcacatgcccagtctcag
cctcaaaatactatgactcctcgtcctgctacacctaccagtgctcctccggtgcagata
tccacagtgcaggctccaggaacgccgattattgcacgacaagtgacaccaactactatt
attaagcaagtgtctcaggctcaaacaacagtgcaacccacaacaacgctacagcgtcct
ccggttgtgcaacctcagattgttctgggtggtactgcacaaacaactacgttggggaca
gcaacggctgtacaaactggaactcctcagagaacagtgcaaggaacgacggcgacctcc
actgcagccacagaaactatggaaaatgtgaagaaatgtaaaaactttctgtccacgtta
ataaaactggcatcatctggaaaacagtcttcagagactgcagctaacgtgaaagaattg
gtacagaacctgctggatggaaaaattgaagcagaagacttcaccagtaggctgtacaga
gaactgaattcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgcc
ttgagacagctaacaccagactctgcagctttcattcaacaaagccaacagcagcagcca
acaacgcaagcaacgatagcaacgattccatccgcagcggtgctgctcagctcctcagtt
cagcgcacagcagggaaggcaactgcaactgtaacgagtaccctccaacaacctgtcatc
agcctaactcagcctacacaagtcggtgtcagtaaacaagggcagtctacaccactggtt
atccaacagtctcaaaaagcaggggcattgataaggcctccacaggtaacgttgacacag
acgccaatggtagcactgcggcaaccacatagtcgtattatgctcactactccccaaatt
caactgaatcaacttcagacagtacctgtggtaaaaccagcagtattacctggaaacaaa
gctattgccactgtttcgacacaactagctgctgctcagaagaataaactgaaagaacct
gggggaggctcttttagggatgacgatgacattaatgatgttgcatcaatggctggagtc
aacctgtcagaagaaagtgctcggatattggcaacaaactctgaactagttggcacatta
acaaggtcctgtaaagatgaaaccttccttttcccagcacctttacaaagaaggatatta
gaaataggtaaaaaacatggaattacagaaatccatcctgatgtagttagctacgtatca
catgctacacaacaaagactacaaaacctcgtggaaaaattatcagagactgctcaacaa
aagaatatttcttacaaggatgatgaaagatacgaacaagcaagtgacgttcgggcacag
ctcaagttctttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaaagg
gaaattttaatgcgtgcagcaaagtctcgatctcgacaagaagatccagaacagcttagg
ttgaaacagaaggccaaggagatgcagcaacaagagctagcacagatgagacagagggat
gccaacttgactgcattagctgccattggtcccaggaagaaaaggaaagtagattcaccg
ggatctggatcagggacagagggatctggttcaagtgcagcagtcccaggcagctctgga
gtcggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggacctc
atattttgtttagaaaatgagcgagagacaagccattcactattgctatataaagcattc
cttaagtaa
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integrated database retrieval system
