Strigops habroptila (Kakapo): 115615311
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Entry
115615311 CDS
T08851
Symbol
RBL1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04110
Cell cycle
shab04218
Cellular senescence
shab04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115615311 (RBL1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115615311 (RBL1)
04218 Cellular senescence
115615311 (RBL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115615311 (RBL1)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
115615311 (RBL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
TFIIB
eIF-3c_N
Motif
Other DBs
NCBI-GeneID:
115615311
NCBI-ProteinID:
XP_030359207
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All DBs
Position
13:complement(12258302..12277443)
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AA seq
1056 aa
AA seq
DB search
MSRPEPPPAEPGAAIERLCQELNLDAGSAAEALRDFTALRSTYSLEGEPLHWLACALYVA
CRKSRVPTVGSGLMEGNGVSLTRILRSARLSLIQFFSKMKKWMDMSNLPQEFRERVERLE
RNFEVSTVIFKKFEPIFLDVFQNPYEETSKPQRSRKQRRMPCNVKDLFNFCWTLFVYTKG
NFRMIGDDLVNSYHLLLCCLDLIFANALLCPNRRDLLNPSFKGLPVGFRTTEMKASEDPP
CIIATLCELHDGLLVEAKGIKEHYFKPYISKLFDRKILKGECLLDLCNFTENSKALNKEY
EEYVLTVGDFDERVFLGADAEEEIGTPRKFPIDVPVGKTAARAHVESHLQQHFEKKRSFA
PSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLIAIFESCARSPMES
IMSRVKEIGEKFCCSYTQSTDEQPGSHIDFAVNRLMLAEILYYKILETIMVQETRRLHGK
DLTALLEQDVFHRSLMACCLEIVLFAYSSPRTFPWIIEVLDLRPFYFYKVIEVLIRSEEG
LSRDMVKHLNSIEEQILESLAWTRDSALWNALQASDNKVPTCEEVIFPNNFETSNGGSGF
GHLPMMPVSPIIHPRVKEVRTDLGGSLRRDMQPLSPISVHERYSSPMAGSAKRRLFGDDT
PKEMQMEKVLTEGTKLTIAPASSIAAENVSAPPGQTVLTMTTATVPGKTGQKVTIPLHGI
ANEMGGITLIPILMNLGQPCKTEAQAPCHPQGTQAHEVHLSSGNKPKKTGSLALFYRKVY
HLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDRHLDQLLLCAFYIMAKVTK
EERTFQDIMKSYRNQPQANSHVYRSVLLRNISADGPLEKNTNQDVEMTEDLSVKTGSSSG
RSAAESSSESGTEERGDLIKFYNAVYVERVKSFALKYDITNQDHVMEAPPLSPFPNIRQQ
TVSPRRISQQHAVYVSPHKNGACLTPRSALLYKFSGSPSKSLKDINNMIKQGEHRSKKRA
ITIDSDTESPTKRLCQENDDVLLKRLQDVVSERANH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcccggagccgccgcccgccgagcccggcgccgccatcgagcggctgtgccag
gagctcaacctggacgcgggcagcgccgccgaggccctgcgcgacttcacggcgctgcgg
agcacctacagcctggagggcgagccgctgcactggctggcctgtgccctctacgtggcc
tgccgcaagagccgggtgcccaccgtggggagcggcctgatggaggggaacggcgtgtcg
ctgaccaggatcctgcgctccgccaggctcagtctaattcagttttttagcaaaatgaag
aagtggatggacatgtccaatctaccacaggaattccgagagcgagtggagaggctggag
aggaattttgaagtgtcaactgtgattttcaaaaagtttgaaccaatatttttggatgta
tttcaaaacccttacgaagaaacttctaaaccacagcgaagcaggaaacagaggcggatg
ccctgcaatgttaaagatctcttcaacttctgctggactctctttgtgtacaccaagggt
aatttccgtatgattggagatgatttagtaaattcctatcatttgcttctgtgctgcttg
gacctgatttttgcaaatgcccttttgtgtccaaatagaagagatttgctaaatccatcg
ttcaaaggtttacctgtgggcttccgcacgacagagatgaaagcctctgaagatcctcct
tgcatcattgccaccctctgtgagctgcatgatgggcttttagtagaagcaaaaggaata
aaggaacactactttaagccatacatttcaaaactgtttgataggaagattttaaaagga
gaatgtctgttagatctgtgcaatttcacagaaaatagcaaagcactgaataaagagtat
gaagagtatgttctgacagtgggtgacttcgacgagagagttttcctcggtgctgatgct
gaagaagaaattggcacgcctcgaaaattccctattgatgtgccagtagggaaaacagca
gcacgagctcatgtggagagtcatctccagcagcattttgaaaagaaaaggtcatttgca
ccttcaactcccctgactgggagaagatacctacgagaaaaggaagctgtcatcactccc
gttgcttcagcaacacaaagcgtgagccggttgcagagcattgtggctggattgaaaaat
gcaccgagtgaacaactcatagctatttttgagtcttgtgcacgcagccctatggaaagc
attatgagcagggtgaaagaaataggtgagaagttctgttgcagctacactcagtcaaca
gatgaacaaccaggatcacatatagattttgctgtaaacagattaatgctggcagagatc
ttgtactataaaatcttggagactataatggtgcaagaaacacgaagactacatgggaag
gatctgactgctctcttggaacaagatgtctttcatcgctctctcatggcatgctgcttg
gagatcgtgcttttcgcatatagctcacctcgaaccttcccctggatcattgaagttctt
gacctcaggccattctatttctataaggtaattgaagtcctgattcgatctgaggaagga
ctttccagagacatggtgaagcacctcaacagcattgaggaacaaattcttgagagcctt
gcctggactcgggactcagcactctggaacgctctccaggcctcggataacaaggtccca
acctgtgaagaagtaatatttcccaataactttgaaacaagcaatggaggaagcgggttt
gggcatttgcctatgatgccagtatctcctatcattcatcctcgagtaaaagaggttcgg
acagatcttggtgggagtctaagacgggacatgcagccgttgtccccaatctctgttcat
gagcgctacagttctcccatggctggaagtgcaaagagaaggctctttggagatgacacc
cccaaagaaatgcagatggaaaaagttttaaccgaaggaactaagttgacgattgctcca
gcatcaagcattgctgctgaaaatgtgtcagctcctcctggccaaacggtgctgaccatg
accacagctacagtcccaggaaaaacaggacagaaggtcaccattccactgcatggtatt
gcaaatgaaatgggtggaatcacattgatacccattttgatgaatttaggtcagccatgt
aagacagaggcacaagctccctgccaccctcaggggacccaagcacatgaagtgcatctg
tcatcaggaaacaaaccaaagaagacaggatccttggcactgttctacagaaaggtttat
catctggcaagtgtgcgcttgcgtgacctgtgcttaaaactggatgtttccaatgacctg
cgcaggaagatatggacgtgctttgaattcaccttggtccactgtgctgatctcatgaag
gacagacatttggaccagctcctcctctgtgccttttatatcatggcaaaggtaaccaaa
gaggaacgaacatttcaggacatcatgaaaagttacagaaatcagccccaagcaaacagc
catgtttataggagtgtcttgttgagaaatatttctgctgatggcccgttggagaaaaat
acaaaccaagatgtggagatgacagaagacttgtctgtgaaaactggcagttcctcggga
cgatccgcagcagagagctccagtgagtcgggaacagaggagagaggagatctcattaag
ttttacaatgcggtctatgtagaaagagtaaaatcatttgcactgaagtacgatatcaca
aaccaggaccatgtaatggaagcccctcctttgtctccattccccaacatcaggcagcag
acagtgtctcctcgccgcatctctcagcagcacgcagtttatgtttcaccccacaagaac
ggcgcctgcttgacacctcgatctgcactcctgtataaatttagtgggagcccttctaag
agtttgaaggacatcaacaatatgataaaacaaggtgaacacaggagtaagaagcgagca
ataacgattgacagtgacactgaatctccgacgaagcgactctgccaggagaatgatgac
gttctactcaaacgtctccaagatgttgtcagtgaaagagcaaatcattaa
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