Strigops habroptila (Kakapo): 115615508
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Entry
115615508 CDS
T08851
Symbol
EBF1
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115615508 (EBF1)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
115615508 (EBF1)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
115615508
NCBI-ProteinID:
XP_030359520
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Position
12:complement(15632183..15912383)
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AA seq
596 aa
AA seq
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MFGIQESIQRSGSSMKEEPLGAGMNAVRTWMQGAGVLDASTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVWSELITP
HAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQKVIPRHP
GDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQLPALANT
SVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQTNYNSVTTS
MNGYGNAGMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGIFSFSPAN
MVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQDQSFVDSSKYSTAGSLQGLAFS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaagcatccagcggagtgggagcagcatgaaggaagagcccctc
ggcgcggggatgaacgcggtgcggacgtggatgcagggagccggcgtcctggacgctagc
acggccgctcagagcggagtgggtctggctcgggctcacttcgagaagcagcctccttcc
aacctgaggaagtccaactttttccacttcgtcctggctctgtacgaccggcaggggcag
cccgtggagatcgagcgcaccgccttcgtgggcttcgtggagaaggagaaggaagccaac
agcgagaagaccaacaacgggatccactaccgcctgcagctgctctacagcaatgggatc
aggacggagcaggatttctacgtccgactcattgactccatgaccaagcaggcgatagta
tatgaaggccaagacaagaacccagaaatgtgccgagttctgctcacgcatgaaataatg
tgcagccgctgttgtgacaagaaaagctgtggcaacagaaatgagactccatcagatcca
gtgataattgacaggttcttcttgaaatttttcctcaaatgtaaccaaaattgcctaaaa
aatgcaggaaatcctcgagacatgcgtcgattccaggttgtggtgtctacaacagtcaat
gttgatggccatgtgttggcagtgtcggacaatatgtttgtacacaacaattccaagcac
gggcggagagctcgaagacttgatccctcggaagcagctacaccatgtatcaaagccatc
agtccaagtgaaggatggactacaggaggtgccactgtcatcatcataggagacaatttc
tttgatgggttacaggtcatattcggcaccatgctggtttggagtgagctgattactcct
catgccatccgtgtacagacgcctccccgacatatcccaggggttgtagaagtcacattg
tcctacaagtctaagcagttttgcaagggaacgcctggaagattcatttacacagctctg
aatgaacccaccattgactatggtttccaaaggttacagaaggttataccccggcaccct
ggtgaccccgaacgcttgccaaaggaagtaatacttaagagggctgctgatttagtagaa
gcactctatggtatgccacataataaccaggaaataatcctgaaaagagcagcagacatc
gcagaagcactctacagtgtcccccgcaatcacaaccagctccccgcccttgctaacaca
tcagtccatgcaggaatgatgggagtgaattcctttagcggtcaactagccgtcaatgtt
tccgaagcctcacaagccaccaatcagggttttactcgcaactcaagcagcgtgtcacct
catggctatgtgccaagcaccacccctcagcagacaaattataactctgtcacaacaagc
atgaatggctatgggaatgctggaatgtcaaatttaggcggttctccaaccttcctgaat
ggatctgctgccaattctccctatgccattgtgccatcaagtccaacaatggcctcctcc
actagcctcccctcaaactgtagcagttcctctggaattttctccttctcaccagccaac
atggtttcagcagtgaaacagaagagtgcttttgcgcctgttgtgagaccgcaaacttct
cctcctcccacctgcaccagcaccaatggcaatagcctgcaagaccagtcttttgtggac
tctagcaagtactccactgcagggtctctccaggggctggccttctcctga
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