Strigops habroptila (Kakapo): 115615586
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Entry
115615586 CDS
T08851
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115615586 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shab03400
]
115615586 (UIMC1)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
115615586 (UIMC1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
115615586
NCBI-ProteinID:
XP_030359764
UniProt:
A0A672TH09
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Position
12:complement(16335729..16374067)
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AA seq
814 aa
AA seq
DB search
MPRRKKPTEGLDSRGQDGEEEEEDKRNSANPKKKRSFVDAFIVISDSDGEQESKEESGLQ
KKRTKQQLERTKFAAKRKIAQMTEEEQFALALKMSEQEARQVNCQEEEEEELLRKAIAES
LSSCQSSDCTDATPQLCAEGQSQPAEKEGSEILGGLALRPDTPRSECSSHSQSTRADGNG
QMDVTRSPLVVLKRLSQEIVESSLASSIIVSPGKGQPVTRSSEKLSSSAKSDSSNTLPST
LGEDLISLSPTFGRVTSGSRRLTPRRLFTSSSSSSGTTGHEPKEQPLPCTGHSVEEAGAR
SSATLWKSWTAEQGGSPRGSGGGAGTKHSSQPGHATKACVSAEQAEQNEVPNSTPELCVL
NAAEEKHKQHEARDTVHYYWGIPFCPKGVDPNQYTKVILCQLEVYQKSLKQAQRQLLHKK
EFGSPVVPSPSLSKNELGKEEQISRENGIADGAEDGDPDGQKESESMTWLLPSKRREAES
PGHSMEEENSTSDDEPTTSYCQASQALPADDACEDGEPMQVAQSISVLTPLGSKRSPDTA
TENSAEEEISLCPETQPSPQQAIEVEGEELCSGPGGAPKQAGGDEDAGRTVAECSPAAEC
SPAADRVLCPMCDQGFPAAEIELHAMYCNGVVGQEAGKDSSVLTRHQREMRRKAASSDSG
PSSLDIDKCEKCYLCKSLVPLLQYQRHVDSCLQAARQAQGTRRLRRAKDVGRQERGLLRM
LELSESKSAGADAGAPLPGLGDQQSPPARPARARGPMGNSPSSLRHLPLNISPLKSGVSF
SEATDCVVDLKPHAALRLGSQQQTKGCRRRKHKF
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaggaagaagcccacagagggcctggactctcgaggccaggatggggaggaa
gaggaggaagataagaggaactcagccaaccccaagaagaagcgcagctttgtggatgcg
ttcattgttatatctgacagcgatggagagcaggagtcaaaggaggagagtggattgcaa
aagaagagaacaaaacagcagctggagagaacgaagtttgctgctaaaagaaaaattgca
cagatgactgaagaggaacagtttgcgctggccctgaaaatgagtgagcaagaagccaga
caagtgaactgtcaggaagaggaagaggaggagctcttgaggaaggccattgctgagagc
cttagcagctgtcagtcctcggactgcactgatgcaacccctcagttgtgtgcagaaggc
caaagccagcccgccgagaaggaaggctctgagatcctgggaggtctggcgcttcgccct
gacacccctcgctccgagtgcagctcccactcacagagcaccagagctgatgggaatgga
cagatggatgtcacccggagccccctggtagtgttgaagaggttaagccaggaaattgtt
gaaagctcactagcatccagcataatcgtgtctccggggaagggccagcctgtgacaagg
tcaagtgaaaagctttcctcatcagcaaaaagtgattctagtaacacgttacctagcact
cttggagaggacctcatctctctgagtcccacctttggcagggtgacttcaggctcccgg
cgactgacacctcggagactgttcacgagctcctccagctcttctggaacaacaggccac
gaaccaaaagagcagcccctgccctgcactggccattcagtggaggaagctggtgccagg
agctcagccacactctggaagagctggactgcagaacagggtggcagccccagggggagc
ggtggaggagcaggtaccaaacacagctcacagcccgggcacgccaccaaagcctgtgtt
tccgcagagcaagcagagcagaatgaggtgcccaacagtacccctgagctttgtgtactg
aatgcagcagaggagaagcacaagcagcatgaggcaagagacacagtgcactactactgg
ggcatccccttctgccccaaaggggtggaccccaaccagtacaccaaagtcatcttgtgt
cagctggaagtttaccagaagagcctgaagcaggctcagaggcagctactgcataagaag
gagtttggtagcccagttgtgcccagtccttccttgagcaaaaacgagcttgggaaagaa
gagcagatcagcagggagaatgggattgctgatggtgcagaagatggagacccagatggg
cagaaggagtctgagagcatgacctggctcctgccttcaaagaggagggaggcagagagt
ccggggcacagcatggaagaagagaattccacttctgatgatgaaccaaccaccagctac
tgccaggcctcccaggcgctccctgcagacgatgcgtgtgaggatggggaacctatgcaa
gttgcacagagcatctctgtattgaccccacttggcagtaaaaggagcccagatactgcc
acagaaaactctgctgaagaagagatctctctctgcccagagacccagccaagtccacag
caagctattgaggtggagggagaagagctctgctcgggccctggaggtgcacctaagcag
gctggtggagatgaagatgctggcaggaccgtggctgagtgcagtcctgctgctgagtgc
agtcctgctgctgaccgtgtgttgtgccctatgtgtgaccaaggctttcctgctgcggag
atcgagctgcatgccatgtactgcaacggtgtcgtgggacaggaggctggcaaggacagc
tcagtgctcacccggcatcagagagagatgagaagaaaagcagccagcagtgacagcggc
ccatcatccttagacattgacaagtgtgagaagtgctacctctgtaagtcactggtgcca
ctgctgcagtatcagaggcacgtggacagctgccttcaggctgctaggcaagctcaggga
accaggaggctgcgaagagccaaggacgttggaaggcaggagaggggactcctcaggatg
ctggagctctcggagagcaagtctgcaggtgctgatgcgggggcccccctccctggacta
ggagaccaacagtcccctcctgctcgcccagccagagccagggggccgatggggaacagc
cccagctcccttcggcaccttcccttgaacatctcccctctgaaatccggcgtctccttc
tcggaagccacggactgcgtggtggacttgaagccgcacgcggctctccgcctgggcagc
cagcagcagaccaaaggctgccgccgaagaaagcacaagttctga
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