Strigops habroptila (Kakapo): 115615604
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Entry
115615604 CDS
T08851
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
shab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115615604 (SRRM1)
03015 mRNA surveillance pathway
115615604 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115615604 (SRRM1)
03041 Spliceosome [BR:
shab03041
]
115615604 (SRRM1)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115615604 (SRRM1)
Spliceosome [BR:
shab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
115615604 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
115615604
NCBI-ProteinID:
XP_030359804
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All DBs
Position
12:1015445..1032058
Genome browser
AA seq
907 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEPTSNS
DIPKAPKPEPPVPEAKETSPERNSKKEREKEKDKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSS
SSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQ
QSNRARKSRGSVSPSRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKES
SPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRR
RSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPT
AKRRSPSLSSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPPPPRRGASASP
QRRQSPSPSTRPIRRVSRTPEPKKTKAPTPSPRSARRVSSSRSASGSPEPAPKKHQGPPS
PTRSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHK
KEKAAAAAATAAVAAADTTSAQEDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRK
AQVSPPS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggttcttccgcggaacaagtgcagaacaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaggtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggattcgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctattaagtgcacaggaaaacattgctggtattcca
actgcatttctggagctgaagaaagaagaaataaaacagcgacagatagagcaagagaaa
ctggcttctatgaagaaacaagatgaagacaaggagaagagagataaggaagacaaagac
aacagagaaaaaagagacagatccaggagtccaagaaggcgcaaatcaaggtctccttcc
cctcgaaggcggtcgtcgcctgtcagaagggagcggaagcgcagccattctcgctcccct
caccacagaaccaagagccgtagtgctactcctgcaccagaaaagaaagaggcgactcct
gagccagaaccctctgtgaaaccaaaggagactgttgttcaagagccaacttcaaacagt
gatatcccaaaagctcctaaacctgaacctcctgtaccagaggctaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggaaaaagataagactcgtcaaagatcccca
actcggtccaagtcaaggtcaagatctcgatcacgttctccatctcattctcgaccaaga
aggcgtcatagatcacggtcaaggtcttactcccctagaaggcgaccaagcccaagacga
cggccgtctcctaggagaaggagccctccaaggcgaatgcctccccctcccaggcacaga
agaagcagatctcctgtgaggcggagacgacggtcatcagcgtccttatccggcagtagc
tcttcctcctcctcttcacgttcccgatcaccgccaaagaaaccacctaaaaggactgtg
tccagtcctcctcgtaaaacacgtaggctctctccttctgcaagccctcctcggcggagg
cacagaccatccccaccagcaagtccgcctccaaaaccacgcaggtctccaacaccccag
cagtcgaatcgtgcaaggaaaagccgtggctctgtttcacccagcagagcatcagcaccc
aaacataagagtactgaaaaacgggagtctccttcgccagcaccaaaaccaaggaaagca
gaactgtcagaatcagaagaagataaaggaggcaaaatggctgcagcagactctgttcaa
cagaggcgtcagtacagaaggcagaaccaacagtcttcatctgattctggttcttcatct
tcatctgaagaggaaagacctaaaagatccaacgtgaagaatggggaagttggtagacgc
cgacgccattcccattcacgcagtccatcgccgtctccacgcaagcgacagaaggaatcc
tcccctcggatgcagatggaaaagaggtggcaatcaccagtgatgaaaagccggaggagg
agaagcccctcacccccgccggcgcggcggcgacgctccccttcccctgcccctccgccc
cggcgccggcgctccccttcgctgcctcgtcgaaggtctccatcaccacccccacgcaga
cgctcgccttctccacggagatactctccaccgatacagagacgatattctccttcacca
ccacctaagagaagaacggcctctcctcctcccccacctaaacggagggcatccccttct
ccacaatccaaacgcagagtctcccattcaccaccaccaaaacagaggagctcaccaact
gctaaaaggcgttcgccttcgctgtcttccaagcaccggaagggatctcctcccagtagg
tccaatcgggaaacacgttcaccaccacaaaacaaaaggcattcaccttcaccacggcct
agagcttcccatacctctgcaagcccaccaccaccacgaaggggagcttcagcttcaccc
cagagaagacagtctccatctccaagcactagacccatcaggagggtgtcaagaacgcca
gaacctaagaagacaaaggctcccacgccaagcccacgatctgcaagacgggtgtcttca
tcacggtctgcatcaggatcacctgagccagcacccaaaaaacatcaaggacctccatct
cccactcggtctcgttctccttctgcaaattggtcacctgcaaaaaaggctaaaagccca
actcagagcccatcacctgcaaggaattcagatcaagaagggggtggaaagaagaagaag
aaaaagaaggataagaagcataaaaaggataaaaagcacaagaaacacaaaaagcataag
aaggagaaggctgcagcagctgcagcaactgctgctgtggctgcagcagataccacctca
gcacaggaagaccaggaagcagagacagaacccaaaaaggagacagaaagtgaaccagaa
gacaaccttgatgatctagaaaaacacctgcgagagaaggcactgaggtcgatgaggaag
gcgcaagtgtccccaccatcctag
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