Strigops habroptila (Kakapo): 115615824
Help
Entry
115615824 CDS
T08851
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shab04515
]
115615824
Cell adhesion molecules [BR:
shab04515
]
Cadherins
Protocadherins
115615824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
115615824
NCBI-ProteinID:
XP_030360318
UniProt:
A0A672UHQ1
LinkDB
All DBs
Position
12:21427952..21435898
Genome browser
AA seq
849 aa
AA seq
DB search
MLGITEDSGWLFWRVMACGRVNRDSKRQVILFFLCFCVCRSGAETLRYSLPEEMERDSFV
ANIAKDLGVSPSQLVSRNARVVSEGNEQLFLLNQNTEVLTAKESLDREEICPQRDTCMLV
FKIFLENPLQLIRGEVEIRDVNDNSPAFPEKEMVLEIPETAPPGSRFPLESAQDMDVGSN
GLQNYSLGSNSHFSLALKTGKNGMKYAELVLQRQLDREEQREMNLLITATDGGSPPRLGT
AQVRIVVVDANDNIPVFGQEVYEVRLAENSPPEQLVVRVTAADLDEGSYGKVRYTFTQTP
ERSRQLFELNPATGEIRVAGNLDFEEAKTHEMVVKATDGGGLSAHCKVQVEVLDVNDNPP
EIALTSLTASIPEAAPPRTVVALFSVRDRDSGDNGRTECSIEGDLPFSLTPTFDNYYELR
TSAALDRERTAEYNVTVTAMDWGTTRLSSRKNLFVQILDVNDNSPEFTQEVYTMSVTENN
SPMLRIGSVNATDADAGNNARINYALVQQEGNEQPVVSVNSENGDVYILRPMDYEEVGTF
EVAVRATDGGSPPLSAQTVLRVVVLDENDNAPVVLHPPPDGSAATGELVLRWARAGYLVA
KVVAVDADAGQNAWLSYELAKATESGLFRVGLHSGEVRTARAVSERDASRQRLVRDRGQP
PRSATATLGITLVDGFSDAHLRVSEEVPASEPDGPLTLYLIASLACVSALFLATAVAAVA
VKLRRARQSEAESLPTFPKAATDSNAGSLPRSYLYDVCFAAGTVNSEFRFLRPLLPCFPA
GLPAGPGEQRSSVCSQDAAIPGEGGDWSAQGRAPPPEGMGPSPAEAACTANRGMELNVSS
DQNRWLTQQ
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaatcacggaagacagtggatggcttttctggagagtaatggcgtgtgggaga
gtgaacagagacagcaagaggcaagtgatcttgttttttctgtgcttttgcgtgtgtcgg
agcggggccgaaaccctccgctattctctgccggaggaaatggagagagactcctttgtc
gccaatattgcaaaggacctgggggtttctccgagccagcttgtgtctcgcaatgcccgt
gttgtgtcagaggggaacgagcagcttttcctccttaatcaaaacacggaagtcctgacg
gcaaaggagtctctggaccgagaggagatctgtccgcagagggacacctgcatgctcgtc
tttaagatattccttgaaaatccgctgcagctgatccgaggggaggtggagattcgtgat
gtgaacgacaactcgcccgcgttcccggagaaggagatggttttagagataccggaaacg
gcaccccctgggtcccgtttccctctggaaagcgcccaagacatggacgtgggcagtaac
ggtttgcagaactacagccttggatcaaattcgcatttctccctcgctctgaaaacaggg
aaaaatggaatgaaatatgcggagctcgtcctacagcgccagctggaccgcgaagagcag
cgagagatgaatttacttatcacggccaccgacgggggctcgccacccaggctggggacg
gctcaggtccggatcgtggtggtggatgccaacgacaacatcccggtcttcggacaggag
gtctacgaggtacgcctggccgagaacagtcctccggagcagctggtggtcagagtgaca
gcagcagatctcgacgaagggtcctacgggaaagtgcggtacaccttcactcagacaccg
gaacgatctcggcagctcttcgagctgaatccagccaccggggagatacgggtggcgggc
aacctggatttcgaggaagcgaaaacccacgagatggtggtgaaagccactgacggcggg
gggctgtcggcgcactgcaaagtgcaggtggaggtcctggacgtgaacgacaaccctccg
gagatcgcgctcacttccctcacagcctccatccccgaggccgccccgccccgcacagtg
gtagccctgttcagtgtgcgggaccgggactccggggacaacggcaggacagagtgctcg
attgaaggggacttgcctttcagtctcaccccgacttttgataattactacgaactgaga
acgagcgcggccctggacagggagaggacagcggaatacaacgtcaccgtcacagccatg
gactggggcacgacgcggctcagctctcggaaaaatctctttgtgcagatattggacgtg
aacgacaattccccagagttcacccaggaggtttacaccatgtcggtcacggagaacaac
agccccatgcttcggataggcagcgtgaacgccacggatgccgacgcgggaaacaacgcc
cgcataaactatgcgctggtgcagcaggagggcaatgagcagccagtcgtgtcggtcaac
tctgaaaacggggatgtttatatcctccgcccgatggactacgaggaggtgggcaccttc
gaggtggcggtgcgcgctaccgacggcgggtcgccgccgctcagcgcccagacggtgctg
cgcgtggtggtgctggacgagaatgacaacgcgcccgtcgtgctgcacccgccccccgac
ggcagcgcggcgacgggcgagctggtactgcgctgggcgcgggcgggatacctggtggcc
aaggtggtggcggtggacgcggacgcggggcagaacgcgtggctgtcatacgagctggca
aaggcgacggagtcggggctgttccgcgtggggctgcacagcggcgaggtgcgcacggcg
cgggcagtgtcagagagggacgcgtcccggcagaggctggtgcgggaccgggggcagccg
ccgcgctccgccaccgccaccctcggcatcaccctcgtggacggcttctccgacgcccat
ttgcgagtgagcgaggaggtgccagcctctgagcctgacgggccgctgactctgtacctc
attgcctccctagcctgcgtgtcggcgctgttcctggccaccgcggtggccgccgtggcg
gtgaagctgcggcgggccaggcagagtgaggcggagtccttgcccacgtttccgaaggct
gccacagatagcaacgctggctccttgccccgcagctacctgtacgacgtctgcttcgcc
gccggcaccgtcaacagcgagtttcggttcctcaggcccctcttgccctgcttccccgcc
gggctgcccgccggccctggcgaacagcggagctcggtgtgctcgcaagatgcggctatc
cccggagaaggtggcgactggtcagcacagggcagagctcctccccccgaaggtatgggt
cccagccccgcagaagcagcctgcactgcgaacagggggatggagctaaatgtcagttct
gatcaaaaccgctggctcacacagcagtaa
DBGET
integrated database retrieval system