Strigops habroptila (Kakapo): 115615827
Help
Entry
115615827 CDS
T08851
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shab04515
]
115615827
Cell adhesion molecules [BR:
shab04515
]
Cadherins
Protocadherins
115615827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
115615827
NCBI-ProteinID:
XP_030360323
UniProt:
A0A672UFN5
LinkDB
All DBs
Position
12:21449295..21459841
Genome browser
AA seq
813 aa
AA seq
DB search
MATARQVLCLCAFLSLLHARAEPIRYSVAEEGESGSVVANVAEDAGLSPAQLSARGARLL
SEDSRQHFRLDRASGRLVVGERLDREELCGQSATCTLPFELLLSNPVQFFRVEVAVEDIN
DHAPAFPEKEITLKILERSDPGSRFPLEGAWDLDVGSNSIQSYSISPDNEYFSIDFGSRI
KGKMYVELVLEKPLDREEQAEVDFTLIAVDGGSPPRSGTTQIHIVVLDVNDNAPIFSEEF
YVGQVLENAPKGSVVLRVVATDRDAGVNGDISYQFSQAGGQSHSAFTIDPTSGEIKLTKP
LDFEVAENHELSVRATDGGDLSAICKVLVEVVDVNDNAPELVVSSFSSPLPENALPGTVV
ALFTVRDRDSGANGKIFCALEDQLSFSLRPAYKNYFELVTVSVLDREKTARYILTVTAAD
AGSPPLTTTQTFTVDISDVNDNAPVFNQTSYTMYVRENNVPTVLVGTISATDADVGPNAK
VTYSLLPAHPAGQPSCSCISVNSETGDVFVLRPLDYEKVRQIEVLVKASDAGSPPLSANV
TIRLVVVDENDNAPLVLYPSQESSPPSSELVPISAEAGYLITKVVAVDADSGQNSWLSYH
LLRATDPGLFVVGAQSGEVRLRRPVTERDAVKQKLVVLVRDNGRPPLSATAALSALVLSD
FSDVRLTHSSLAMEDDGSSLTIYLIISLVFVSLLFLVSTAALITRKVCKRRELKDGHVLY
GASNLQSSLADAAAAGTLPHAYCYEISLTTGSGNSEFKFLKPILPSLPPQLHATGEGTNN
EQDFPCGIVTAEDMAPDNPEMLSAEQFSSLSFN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcaaggcaagtgctctgtctctgtgctttcctctccctgctgcacgctcgc
gctgagcccatccgctactccgtagctgaggagggcgagagcggctccgtggtagccaac
gtggcggaggacgcggggctgtccccggcgcagctctcggctcgcggcgcccgcctgctc
tcggaggacagccggcagcactttcgcttagaccgcgccagcggccgcctcgtcgtgggc
gagcggctggaccgcgaggagctgtgcgggcagtccgctacctgcacgctgcccttcgag
ctcctgctgtcaaaccccgtgcagttctttcgggtcgaggtggccgtggaggacatcaat
gaccacgcgcccgctttcccggagaaagaaatcactcttaagatactggaaaggagcgac
cctggttcacgtttccctctggagggtgcttgggacctggatgttggcagcaacagcatc
cagtcttacagcatctctccagacaacgagtactttagtattgactttgggagtcggatt
aagggaaaaatgtatgtggaacttgttttggaaaagccgctagacagagaggagcaggca
gaggtggatttcactctcattgctgtggatgggggctctccacccaggagtgggaccacc
caaatccacattgttgttctagatgtaaatgacaacgcccccatcttctcagaggagttt
tatgttgggcaggttttggaaaatgccccgaagggctctgtggttctcagagtagtggca
accgatcgggatgcaggagttaatggggacatctcctatcagtttagccaagcaggaggc
cagagccactcggcattcacaattgaccccacaagcggtgaaattaaactcacaaagcct
ctggactttgaggtagcagagaatcacgagctcagcgtgcgagccacagatggcggggat
ctctcagcaatctgcaaagtgttggtggaggtggtggatgtgaatgacaatgcaccggag
ctggtggtcagttcctttagcagcccccttcctgagaatgcattacccgggacagtggtc
gccttatttactgtcagagaccgggattctggtgccaatgggaagatcttctgtgccctt
gaggaccagttgtcattctccctgcggccagcatataagaattactttgagttggtgact
gtgagtgtgctggaccgggagaagacagcacggtacatcctcacagtcacagcagcagac
gcggggtcacctcctctcacaacgacccagaccttcacagtggacatctctgatgtcaat
gacaatgcacctgtgttcaaccagacatcatacaccatgtatgtgcgtgagaacaatgtc
cccacagtgctcgttggaaccataagtgctacagatgctgacgtggggcctaatgccaag
gtgacctattccctgttgccagcccaccctgcagggcagccttcctgctcctgcatctct
gtgaactctgagactggggatgtgtttgtgctgcggcccctggactatgagaaggtgagg
cagattgaagtcctggtgaaagcctccgacgcagggtcacctcctctcagtgccaatgtc
accatccgccttgttgtagtggacgagaatgacaatgcccctctggtgctgtacccctca
caggagagcagccctccgtccagtgagttggtgcccatttcagctgaggcaggctacctc
atcaccaaagtggtggctgttgatgctgactcagggcagaactcctggctctcataccac
ctgctgagggccactgatcctggactgtttgtggtgggtgcccaaagtggggaggtgcga
ctgagaaggccggtgacagagagagatgctgtgaagcagaagctcgttgtgctggtacga
gacaacggtcgacctccactgtcagccactgcagcgcttagtgcactcgtgctcagtgac
ttctcagatgtgcggctaacacacagcagcctggccatggaggatgacggcagctccctg
acgatatatttaatcatttccttggtcttcgtctcactcctcttcctcgtgtccacagca
gccttaatcactcggaaggtgtgcaagagaagggagctgaaggatgggcacgtgctttac
ggcgccagcaacttgcagagcagcctggctgatgcggctgctgcagggaccctgccccac
gcctattgctatgagatcagcctcacgacgggctcgggcaacagcgagttcaagttcctg
aagcccatcctccccagccttcctccacagctgcatgccacaggtgagggcaccaacaat
gaacaggatttcccgtgtggcattgtcactgcagaggacatggcaccagacaaccctgag
atgctctctgcagaacaattcagtagtctttcctttaactag
DBGET
integrated database retrieval system
