KEGG   Strigops habroptila (Kakapo): 115616034
Entry
115616034         CDS       T08851                                 
Symbol
SYNC
Name
(RefSeq) syncoilin
  KO
K10377  syncoilin 1
Organism
shab  Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:shab00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:shab04812]
    115616034 (SYNC)
Cytoskeleton proteins [BR:shab04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type IV
     115616034 (SYNC)
SSDB
Motif
Pfam: Filament Laminin_II Golgin_A5 CENP-H SOGA TPR_MLP1_2 FAZ1_C TCAD7 Hanta_nucleocap V_ATPase_I DUF4972
Other DBs
NCBI-GeneID: 115616034
NCBI-ProteinID: XP_030360702
LinkDB
Position
12:2047374..2054271
AA seq 549 aa
MGKRRHFKPDFTAALGKVLVTVVARDLMAEPKPPPEPRLDEAGASTAGAALRPDPVHSPL
EPALGPGLMPQPRDSPGACQDLQTDSGNADLEPNVPQLDQDTAETRIPLDVDVAGIPLDV
DADEAGVPLDVDGTEILLDVNAGGTGVPLDIDADGVEILLDVNGAGIPLDVDGAGIPLDV
DGAGILLDVDADRVGIPLYMDTDRAGIPADVDTDRAGILLDMDAEGAGSPLDADGTEHKC
LTLEELGDYFQECIEAVEQLEKERDSLIAELSQLREPALQEIRHAHEEIQAACRLLAKVE
LERDNLKDEIRQIKQKLFKVTKECVACQYQLESRRHDLSQHAAYRGELETQAGQLSGELS
QLKETCEKEKEVLRQRLEAPPCRQDNLYLQESRRLSMEFESFVAESRRGLEEHYEPQLLR
LLERREAGAKALQEMQGELQGMKEALRPLQGEVSQLRLQNRSLEEQIVLVKQKRDEEVGQ
YREQVEELEDRLKELKNGVQLQQRKNQELEELRTSLHQELSIYKRTKGQRDPQGTSPLAA
YPTRGTAAA
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgggcaagcgcaggcatttcaaacctgatttcacagccgcgctgggcaaggtgctggtg
acggtggtggcacgggacctgatggcagagcccaagcctcctccagaaccgcggctggat
gaagctggagcatccacagcaggagctgctctgcgcccagacccagtgcacagcccattg
gaacctgcactgggtccggggctgatgccccagcccagggacagccccggcgcctgccag
gacctccaaacagatagtgggaatgctgacttggagccaaacgtgccccagctggaccag
gatacagctgagaccaggatcccgttggatgtggatgtggcaggaatcccgctggacgtg
gatgcagatgaagcaggggtcccactggatgtggatgggacagagatcctgctagatgtg
aatgcaggtgggacaggggtcccattggatatagatgcagatggagtagagatcctgctg
gatgtgaatggggcaggaatcccactagatgtggatggagcagggatcccgctggacgtg
gatggggcaggaatccttctggatgtggatgcagatagagtagggatcccgctgtacatg
gacacagacagggcaggaatcccagctgacgtggacacagacagggctggcatcctgctg
gacatggatgcagagggggcaggcagccccctggatgcagatggcacggagcacaagtgc
ctgaccctggaagagctgggggactacttccaagagtgcatcgaagccgtggagcagctg
gagaaggagagggacagcctgattgcagagctcagccagctccgggagccagcgctgcag
gagatccgtcatgcccacgaggagatccaggcggcgtgccggctgctggccaaggtggag
ctggagagggacaacctgaaggatgagatccgtcagatcaagcagaagctcttcaaggtg
acgaaggagtgcgtggcttgccagtaccagctggagagccggcggcacgacctctcccag
cacgctgcttaccggggcgagctggagacccaggccgggcagctctccggggaactgtcc
cagctgaaggagacctgcgagaaggagaaggaggttttgaggcagcggctggaggctcct
ccgtgccgccaggataacctgtacctgcaggagagccgccggctctccatggagttcgag
agcttcgttgcggagagccggcggggtctggaggagcactacgagccccaactgctgcgg
ctgctggagagacgcgaggcgggagccaaggcgctgcaggagatgcagggggagctccag
gggatgaaggaagccctgcggcccttgcagggggaggtgagccagctgcggctgcagaac
cggagcctggaggagcagatcgtccttgtcaagcagaagcgggatgaagaggtcgggcag
taccgggaacaggtcgaggagctggaggacaggttgaaggagctgaagaacggggtccag
ctccagcagcgcaagaatcaggagctggaggagctgaggaccagcctccaccaggagctc
tccatctacaagaggactaagggacagagggatccgcaggggacgtctcctcttgctgct
taccctacccgaggcacagcagctgcctga

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