Strigops habroptila (Kakapo): 115616034
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Entry
115616034 CDS
T08851
Symbol
SYNC
Name
(RefSeq) syncoilin
KO
K10377
syncoilin 1
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shab04812
]
115616034 (SYNC)
Cytoskeleton proteins [BR:
shab04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
115616034 (SYNC)
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Gene cluster
GFIT
Motif
Pfam:
Filament
Laminin_II
Golgin_A5
CENP-H
SOGA
TPR_MLP1_2
FAZ1_C
TCAD7
Hanta_nucleocap
V_ATPase_I
DUF4972
Motif
Other DBs
NCBI-GeneID:
115616034
NCBI-ProteinID:
XP_030360702
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All DBs
Position
12:2047374..2054271
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AA seq
549 aa
AA seq
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MGKRRHFKPDFTAALGKVLVTVVARDLMAEPKPPPEPRLDEAGASTAGAALRPDPVHSPL
EPALGPGLMPQPRDSPGACQDLQTDSGNADLEPNVPQLDQDTAETRIPLDVDVAGIPLDV
DADEAGVPLDVDGTEILLDVNAGGTGVPLDIDADGVEILLDVNGAGIPLDVDGAGIPLDV
DGAGILLDVDADRVGIPLYMDTDRAGIPADVDTDRAGILLDMDAEGAGSPLDADGTEHKC
LTLEELGDYFQECIEAVEQLEKERDSLIAELSQLREPALQEIRHAHEEIQAACRLLAKVE
LERDNLKDEIRQIKQKLFKVTKECVACQYQLESRRHDLSQHAAYRGELETQAGQLSGELS
QLKETCEKEKEVLRQRLEAPPCRQDNLYLQESRRLSMEFESFVAESRRGLEEHYEPQLLR
LLERREAGAKALQEMQGELQGMKEALRPLQGEVSQLRLQNRSLEEQIVLVKQKRDEEVGQ
YREQVEELEDRLKELKNGVQLQQRKNQELEELRTSLHQELSIYKRTKGQRDPQGTSPLAA
YPTRGTAAA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcgcaggcatttcaaacctgatttcacagccgcgctgggcaaggtgctggtg
acggtggtggcacgggacctgatggcagagcccaagcctcctccagaaccgcggctggat
gaagctggagcatccacagcaggagctgctctgcgcccagacccagtgcacagcccattg
gaacctgcactgggtccggggctgatgccccagcccagggacagccccggcgcctgccag
gacctccaaacagatagtgggaatgctgacttggagccaaacgtgccccagctggaccag
gatacagctgagaccaggatcccgttggatgtggatgtggcaggaatcccgctggacgtg
gatgcagatgaagcaggggtcccactggatgtggatgggacagagatcctgctagatgtg
aatgcaggtgggacaggggtcccattggatatagatgcagatggagtagagatcctgctg
gatgtgaatggggcaggaatcccactagatgtggatggagcagggatcccgctggacgtg
gatggggcaggaatccttctggatgtggatgcagatagagtagggatcccgctgtacatg
gacacagacagggcaggaatcccagctgacgtggacacagacagggctggcatcctgctg
gacatggatgcagagggggcaggcagccccctggatgcagatggcacggagcacaagtgc
ctgaccctggaagagctgggggactacttccaagagtgcatcgaagccgtggagcagctg
gagaaggagagggacagcctgattgcagagctcagccagctccgggagccagcgctgcag
gagatccgtcatgcccacgaggagatccaggcggcgtgccggctgctggccaaggtggag
ctggagagggacaacctgaaggatgagatccgtcagatcaagcagaagctcttcaaggtg
acgaaggagtgcgtggcttgccagtaccagctggagagccggcggcacgacctctcccag
cacgctgcttaccggggcgagctggagacccaggccgggcagctctccggggaactgtcc
cagctgaaggagacctgcgagaaggagaaggaggttttgaggcagcggctggaggctcct
ccgtgccgccaggataacctgtacctgcaggagagccgccggctctccatggagttcgag
agcttcgttgcggagagccggcggggtctggaggagcactacgagccccaactgctgcgg
ctgctggagagacgcgaggcgggagccaaggcgctgcaggagatgcagggggagctccag
gggatgaaggaagccctgcggcccttgcagggggaggtgagccagctgcggctgcagaac
cggagcctggaggagcagatcgtccttgtcaagcagaagcgggatgaagaggtcgggcag
taccgggaacaggtcgaggagctggaggacaggttgaaggagctgaagaacggggtccag
ctccagcagcgcaagaatcaggagctggaggagctgaggaccagcctccaccaggagctc
tccatctacaagaggactaagggacagagggatccgcaggggacgtctcctcttgctgct
taccctacccgaggcacagcagctgcctga
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