Strigops habroptila (Kakapo): 115616046
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Entry
115616046 CDS
T08851
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
shab00536
]
115616046 (COL23A1)
Glycosaminoglycan binding proteins [BR:
shab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115616046 (COL23A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
115616046
NCBI-ProteinID:
XP_030360720
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Position
12:complement(11814342..11986355)
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AA seq
467 aa
AA seq
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MSAGSGAAAGTATSALCLLLSLTAVAVCLLLGAKTAELQGRLAALEERGPGPLLDALQPR
VEQLFREKLGEGLAKLRTAREAPSDCMCPPGPPGRRGKPGRRGEPGPAGQSGRDGYPGPL
GLDGKPGPPGPKGEKGEAGDIGPRGLKGEPGEEGLVGARGPPGPKGEPGIQGKKGDDGIP
GEPGLMGPKGEKGSVGPKGENGTDGLPGPKGEPGEKGGVGSIGPRGPPGLKGEQGDTVVI
DYDGRILDALKGSPGPPGPPGPQGAPGPKGELGLPGPPGLDGEKGPKGAKGDQGSTGITG
QKGETGEMGLAGPPGAEGPKGDKGDKGDTGSPCLQNNHIIPEPGPPGLPGPMGPPGIQGP
KGLDGAKGEKGDSGEKGDHGHTGPAGLPGAPGLIGLPGTKGEKGKPGEPGLDGFPGLRGE
KGERSERGEKGERGIPGRKGAKGQKGEPGPPGLDQPCPVVCPLFQPP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggcagcggagccgcggcgggtaccgccacctccgccctctgcctgctcctc
tcgctcaccgctgtggccgtgtgcctgctgctgggcgccaagacggcggagctgcagggc
aggctggccgccctggaggagcgcggccccgggccgctgctggacgcgctgcagccccgt
gtggagcagctcttccgagagaaactgggtgaaggactggcaaagctgcggacggcaaga
gaggctccgtcagactgcatgtgccccccaggccctccagggaggcgagggaagcccggt
cggcgcggagaaccaggacctgcagggcagtcaggacgtgatggttacccggggcctctt
ggtttggatggcaaaccaggacctccaggaccaaaaggggaaaagggtgaagcaggggac
atcggcccaaggggtctcaaaggcgagccgggagaggaaggcctcgtgggtgccagggga
cctccaggaccaaagggtgagcctggtatccaagggaaaaagggtgatgatgggatccct
ggggaaccaggacttatgggccctaagggagaaaaaggaagcgtgggtcccaagggagag
aatggcacagatggcttgccaggacccaagggtgaacctggtgagaagggaggagttggc
tccatcggaccccggggtccccctggtctgaaaggggaacagggtgacactgtagtgatc
gactatgatggccgaatcctggatgctctcaagggttcaccaggtcccccagggccaccg
ggcccccaaggtgctccaggtccaaagggagagctgggcttgccgggtccgcctgggctg
gatggtgaaaagggtcccaaaggagcgaagggtgaccagggcagcacggggatcacagga
cagaaaggagagacaggagaaatgggcttagcgggtccaccgggagcagaaggaccaaaa
ggagacaaaggagataaaggggacaccgggtcaccgtgtttgcagaacaatcatatcata
cccgagcctggaccccccggattacccggccctatgggtcctccaggaatccaggggcct
aaaggcttggatggtgcgaagggagaaaaaggtgacagtggtgagaagggcgaccacggc
cacactggacccgctggtctcccaggtgctccagggctcatcggcctacccggtaccaaa
ggagagaagggaaaaccaggggagccaggattggatggtttcccaggtctcagaggagag
aaaggagagcgaagtgaaagaggcgagaagggtgagcgaggaataccgggcagaaaagga
gccaaagggcagaagggggaaccaggcccccccggactggatcagccttgccccgtggta
tgtcctttatttcagccaccctaa
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