Strigops habroptila (Kakapo): 115616130
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Entry
115616130 CDS
T08851
Symbol
TRIT1
Name
(RefSeq) tRNA dimethylallyltransferase isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
shab01006
]
115616130 (TRIT1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shab03016
]
115616130 (TRIT1)
Enzymes [BR:
shab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
115616130 (TRIT1)
Prenyltransferases [BR:
shab01006
]
Compound prenylation
tRNA dimethylallyltransferase
115616130 (TRIT1)
Transfer RNA biogenesis [BR:
shab03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
115616130 (TRIT1)
Prokaryotic type
115616130 (TRIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
IPT
zf-C2H2_jaz
AAA_16
AAA_33
nSTAND3
AAA_25
AAA_28
Cas6_I-A
AAA_22
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
115616130
NCBI-ProteinID:
XP_030360875
LinkDB
All DBs
Position
12:complement(1824762..1839778)
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AA seq
462 aa
AA seq
DB search
MAAAALCLGRARPPRPLVVILGATGTGKSALALQLGLRLGGEIVSADSMQVYEGLDIITN
KVSPQEQRLCRHHMISFVDPLVSNYTVVDFRDKAVPLIEDIFARDKIPIVVGGTNYYIES
LLWKVLINTKVQLGGCVSHCEKERASTAPGPVSDRKVELEQLDGGELYRRLSRVDPEMAA
KLHPHDKRKVARSLQVFEETGIPHSEILHQQQEEEGGGPLGGPLKYPHSCILWLHADQAA
LDQRLEKRVDDMLAAGLLEELRDFHRRYNQQKVAENRQDYQHGIFQSIGFKEFHEYLISE
GKCSPETSALLLQKGIQALKQVTKRYARRQNKWVRNRFLKRPGPNVPAVYGLEVSDLLRW
EENVLKPALEIVESFIQGREPPAEPVKMEHNVKENKRSHRVCELCDRLIIGDREWAAHTR
SKSHLHHLKRRRKLEATGRAAEAEGDSAGAATSDEDSSQPSP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgcgctgtgcctcggccgggcccgtccgccgcggccgctcgtggtgatc
ctcggcgctaccggcaccggcaagtcggcgctggcgctgcagctggggctgcgcctcggc
ggcgagatcgtcagcgccgactccatgcaggtgtacgagggcttggacatcatcacgaac
aaggtttctccccaggagcagcgtctgtgcaggcaccacatgatcagctttgtggatccc
cttgtctctaactacacggtggtagatttcagagacaaagctgtgcctctcattgaagat
atctttgcccgagacaagatcccgattgttgtgggaggaaccaactactacattgagtcc
ctgctttggaaggtcctcatcaacaccaaggtacagctggggggctgcgtatcccactgc
gaaaaggagagggccagcacagccccggggccggtcagcgacaggaaggtggagctggag
cagctggatggtggtgagctctatcgccgcctgagcagggtggaccccgagatggcagcc
aagctgcacccccatgataagcgcaaagtagccaggagcctccaagtgtttgaagagacg
gggatcccccatagtgaaatcttgcaccagcagcaggaggaggaaggtggagggccctta
ggtgggcccctgaaatacccacattcctgcatcttgtggctccatgcagaccaggcagct
ctggaccagcggctggagaagcgggtggatgacatgctggctgcggggctgctggaggag
ctgcgcgacttccaccgccgctacaaccaacagaaggtggctgagaaccggcaggattac
cagcacggcatcttccagtccattggcttcaaggagttccatgagtacctcatcagtgaa
gggaagtgctcacctgagaccagcgccctgctgctgcaaaaagggatccaggccctgaag
caggtgaccaagagatatgcccggaggcaaaacaaatgggtccgaaaccgcttcctgaaa
cgtcccgggcccaatgtgcccgcagtgtatggcttggaggtgtctgatctcctgcggtgg
gaagagaatgtgctgaaacctgctctggagattgtggagagcttcatccagggccgggag
cccccagcagagcctgtgaagatggagcacaatgtaaaggagaacaagcggagtcaccgc
gtgtgtgagctctgtgacagactcatcatcggggacagggagtgggcagctcacacacga
tccaaatcccacctgcaccatctgaagaggagaaggaagctggaggccaccggccgtgct
gcagaggctgagggggacagtgcgggtgcagcgacgtcggatgaggacagcagccagcct
tcgccatag
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