Strigops habroptila (Kakapo): 115616160
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Entry
115616160 CDS
T08851
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115616160 (TRIM71)
04121 Ubiquitin system [BR:
shab04121
]
115616160 (TRIM71)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115616160 (TRIM71)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115616160 (TRIM71)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115616160 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
zf-RING_UBOX
SARAF
DUF4094
Motif
Other DBs
NCBI-GeneID:
115616160
NCBI-ProteinID:
XP_030360951
UniProt:
A0A672TQX6
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All DBs
Position
1:complement(140450845..140512699)
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AA seq
876 aa
AA seq
DB search
MASFPESDFQICPLCKEMCGSPAPLSSNSSTSSSSSQTSGSSGGGGGGSSCGGPPRRLHV
LPCLHAFCRQCLEAQRHPGAGDSLKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLDVV
VVAAAADEQKNGRAAGAGPAAGSGAGGGSGGGGGNNRHHGRPPPPPRASGSSPAAASAAP
SSTSSSSSSGGGGGSAALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRAH
QRVRLTKDHFIERFAAGPAAPIALSPPYPASPYNILSVFPDRASYCQHHDDEVLHFYCDT
CSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQ
VEMKAKVVQSEVKVVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLD
NTISAVQQVLEEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYMAI
KSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDMISAVVMGPD
GNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSGRSYIGIGLP
GLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQ
FDRPAGVACDISRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEG
KILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLL
VIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFG
TQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttcccgagtccgacttccagatctgcccgctgtgcaaggagatgtgcggc
tcgccggctcccctctcctccaactcctccacctcctcgtcctcctcgcagacctccggc
tcctctgggggcggcggcggcggctcctcctgcgggggcccgccgcggcggctccacgtc
ctgccctgcctgcacgccttctgccgccagtgcctggaggcgcagcggcaccccggcgca
ggggactcgctcaagctgcgctgccccatctgcgaccagaaggtggtgatctcggagccc
tcgggcatggacgcgctgccttcctccaacttcctcctcagcaacctgctggacgtcgtc
gtcgtggccgccgctgccgacgagcagaagaacggccgcgccgccggggccggacccgcc
gcaggctccggcgcgggaggggggagcggcggcggcggcggcaacaaccgccaccacggc
cgcccgccgccgccgccccgtgcctccggctcgtcgcccgccgccgcctcggccgcgcct
tcctcgacgtcgtcgtcgtcctcctcgggcggcggcggcggctcggcggcgctgctgctg
cggcggccgcacagccggcagggcgagccccgctgcagctcctgcgacgagggcaacgcc
gccagctcccgctgcctcgactgccaggagcacctgtgcgacaactgcgtgcgggcgcac
cagcgcgtccgcctcaccaaggaccacttcatcgagcgcttcgccgccggccccgccgcg
ccgatcgccctcagcccgccctaccccgcctcgccctacaacatcctctcggtgttcccc
gaccgggccagctactgccagcaccacgacgacgaggtactgcatttctactgtgatacc
tgttctgtccccatatgtcgggaatgtaccatgggacgacatgtgggtcacagctttatc
tacctccaagatgccctgcaggattccaggactctcaccattcagctcctggcagatgct
cagcaaggacgacaggctattcaactgagtattgaacaggcccaggctgtggcagagcag
gttgagatgaaagcgaaggtggtacagtctgaagtcaaagtagtgactactagacataag
aaggccttggaagagcgggagtgcgagctactctggaaggtggaaaagattcgtcaagtc
aaggctaagtcactctacttgcaagtcgagaagttacgtcagaacctaaataagctggac
aacaccattagtgctgttcagcaggtcctggaggaaggtcgtaccatggatattctcctg
gctcgggaccgcatgctggctcaggtacaggagctgaagaatgtgagaggccttctccag
ccacaggaagatgacaggatcatgttcactccccctgaccaggcattgtatatggccatt
aaatcaatgggctttgtcagcagcggggctttcgctcctctgaccaaagccactggggaa
ggcctcaagcgtgcactgcagggcaaagtggcctctttcacagtgataggctacgaccac
gatggtgagcctcgcctctcgggaggtgacatgatctctgcagtggtgatgggcccagat
ggaaacctcttcggggcagatgtcagtgaccagcagaatggaacctacctggtcagctac
cgcccacagctagagggggagcacctggtgtccgtgatgatgtgcaaccagcacattgag
aacagccctttcaaagtcgtcgtgaaatctggacgcagctacataggcattgggctgcca
gggctctcctttggcagtgagggagacagtgatggcaaactctgccgcccctggggggtt
agtgtagacaaagaaggctacatcatcgttgctgaccgcagtaataaccgcatccaggtg
ttcaaaccatgcgggaccttccaccacaagtttggcaccctgggctcccggccgggccag
ttcgatcgccctgccggcgtggcttgcgacatctcgcgtcgcatcgttgtagctgacaag
gacaatcatcgcatccagatcttcacgtttgaggggcagttcattctgaagtttggggaa
aaaggaacaaagaacgggcaattcaattacccatgggatgtggccgtcaatgcagagggg
aagatcctggtctctgacacaaggaaccatcgtgttcagctgtttgggccagatggtgtg
tttcttaacaagtatggctttgaaggggcactctggaagcactttgattcccccagaggt
gtgactttcaatcacgagggccacttggtagtgacggacttcaacaaccatcgccttctg
gtcatccatccggattgccagtcagcacgctttctgggctcggagggcactgggaacggc
cagttcttgcgcccgcagggagtggcggtggatcaagaggggcgcatcatcgtggccgac
tccaggaaccaccgggtgcagatattcgagtcaaatggtagctttttatgcaagtttggc
actcagggaagtggcttcggtcagatggaccgtccttcaggtatagctgtcacccctgat
ggcatgattgttgtggtcgactttggaaacaatcgaattctcgtcttctaa
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