Strigops habroptila (Kakapo): 115616172
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Entry
115616172 CDS
T08851
Symbol
RNF130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115616172 (RNF130)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115616172 (RNF130)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115616172 (RNF130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
SP24
zf-ANAPC11
PspB
zf-RING_16
Prok-RING_4
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
115616172
NCBI-ProteinID:
XP_030360997
LinkDB
All DBs
Position
12:complement(12787060..12843460)
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AA seq
428 aa
AA seq
DB search
MSWRWARQHGNGGSSVLLLLLLWHCRVRPAGADNASQAYYTALINVTVLSPERGGPTLLR
IDRGRYGQDSPKVEVKGLLVAPVPINGVADRLGCDPRTRFQVPPNTKQWIALLQRGNCTF
REKILRAASHNATAVVIYNNISSEEPVTMTHQGTGDIVAVMITESKVKEILNYLEKNISV
LMAIAVGSRVPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTSARDRNQRRLG
DAAKKAIGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKACVDPWL
SEHCTCPMCKLNILKALGIVPNVPCTDNVAFDMERLTRGQPASRRSALGDFANDSSLSLE
PLRTSGMSQLPQDGELTPRSGEINIAVTKEWFIIASFGLLSALTLCYMIIKATASLNAND
LPHRAEWY
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagctggcggtgggctcgccagcacgggaacggcggctcctccgtcctgttgctgctg
ctgctgtggcactgccgggtccggccggccggcgccgataacgccagccaggcgtactac
accgccctcatcaacgtgacggtgctgagccccgagcgcggcggccccacgctgctgagg
atcgaccgcggccgctacgggcaggattcccccaaggtggaggtcaaaggcctgctcgtg
gctcccgtccccatcaacggagttgcagatcgcctgggctgtgaccctcgaacacgtttc
caagttccaccgaacaccaagcagtggattgctttactacagcgaggaaactgtacattt
agagagaaaatactgcgagcagcttcacataatgccacagctgtggtcatttacaacaat
atatccagtgaagaaccagttacaatgacccatcaagggactggagacattgtcgctgtc
atgattacagaatcaaaggttaaggagatcctgaattacttggaaaagaatatctctgtc
ctgatggcaatagcagtcgggtcccgtgttcctcctaaaaacttcagtcggggctctcta
gtctttgtgtcaatatcattcattgttttgatgataatttcttcagcatggttaatattt
tacttcatccagaagatcaggtacacaagtgcacgtgaccggaatcagcgtcgtcttgga
gatgctgccaagaaagccatcggtaaattgacaaccaggacagtaaagaaaggtgataag
gaaacagacccagactttgatcattgtgctgtctgcattgagagttacaagcagaatgat
gttgttcgcattttaccatgcaagcatgttttccacaaagcctgtgtggatccatggctt
agcgagcactgtacatgtccaatgtgtaaactgaacattttgaaggcactgggaattgtg
ccaaatgtgccatgtacagataacgtagcctttgacatggaaaggctcaccagaggccag
ccagcgagcaggcgatcagcactcggtgattttgccaatgacagctctctcagcctggag
cccctgcgcacctctgggatgtcacagcttccacaggatggggagctaacgccaaggtca
ggagagatcaacattgctgtgacaaaagaatggtttattattgccagttttggcctcctc
agtgcccttacactctgctacatgatcatcaaagccacagctagcttgaatgctaatgat
ctgccccacagagcagaatggtattga
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