Strigops habroptila (Kakapo): 115616404
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Entry
115616404 CDS
T08851
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04140
Autophagy - animal
shab04148
Efferocytosis
shab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115616404 (VPS11)
04148 Efferocytosis
115616404 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115616404 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115616404 (VPS11)
Membrane trafficking [BR:
shab04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115616404 (VPS11)
Hops complex
115616404 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
ISG65-75
GPS2_interact
zf-C3HC4_3
zf-RING-like
zf_RING_Vps8_fungal
GHL13
Motif
Other DBs
NCBI-GeneID:
115616404
NCBI-ProteinID:
XP_030361440
LinkDB
All DBs
Position
17:complement(83307..91977)
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AA seq
928 aa
AA seq
DB search
MAAYLQWRRFVFFDRETVKEPPGPDGAAGKPFALPPGIAVCDSGRGNLVFGDMEGQIWFL
PRSLQFSSFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTG
LAFRQSGKTTHLFVVTTENIQSYMLSAKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEAQNSDKQVL
NIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVRFDVETAIKV
LRQAGYYSHAVYLAEKHMHHEWYLKIQLEDIKNYQEALRYIGKLPFDQAESNMKRYGKIL
MHHVPNETTELLKVLCTDYRPLGDSEGPGMLEGRKANSEEFIPVFANNSRELKAFLEHMT
EVQADSPQGVYDTLLELQLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFDKALVLCQM
HNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEE
DCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVVKDYLVNKLQKQSRQIEQDEQR
IHKYREETTRIRQEIEELKARPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSE
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTL
ITDLPSGKAATLEAGLQRDLLMHTKRST
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttacctgcagtggcgccgcttcgtattcttcgacagagagacggtgaaggag
ccgccggggccggacggggccgcaggaaaacccttcgcgctgcccccgggcatcgcggtc
tgcgactcgggtcggggaaacctcgtgttcggggatatggaaggtcagatctggtttttg
cctcgctcccttcaattcagtagtttccaagcttacaagctaagggtgacacatctgtac
cagctgaagcagcacagtatcttggtttctgtgggtgaggatgaagagggcattaacccc
ttggttaaggtttggaacctggagaagcgagatggtggcaatcctctttgcacacgaatt
tttccagcaataccaggtaataagcccacagttgtatcctgcctcaccgtccacgagaac
cttaatttcatggcaatcggttttgcagatgggagtgtggtacttacaaaaggagacatc
actcgagaccggcatagtaagacccagatcctacatgaaggcagttacccggttactggc
cttgctttccgacagtctggcaaaacaacacatctatttgtggttaccacagagaacatc
cagtcttatatgctttcagcaaaagactatcctcacctggagctggacactcacggttgt
ggactgcgctgctcatctctcagtgacccatcccaggatctccagttcattgtggcagga
aatgaatgtgtgtacctttatcagccagacgaacgtggtccctgctttgcctttgaggga
caaaagctgattgttcactggtatcgggggtacctcatcattgtctccaaggaccgaaag
acttctccaaagtcagagtttgctgggaacgaggcacagaattcggacaaacaagtcttg
aatatctatgacttgtgcaacaaattcattgcatacagctcaatatttgatgatatagtg
gatgtcttagcagagtggggttctctgtatgtactgaccagagacgggaagattcatgtg
ctgcaggagaaggatacgcaaaccaaacttgagatgctgttcagaaagaacttatttgaa
atggccattaacctggccaagagccaccacttggacagcgatggcttgtcagagattttc
cggcagtatggtgatcatctgtataacaaggggaaccacgacggggccatccagcagtat
atccgaactatagggaaattggaaccatcttacgttattcggaaattcctggatgctcag
cgtatccacaatctcaccgcttacctgcagacgctccacctgcagtccttggccaatgca
gaccatactacgctgctgctgaattgctataccaagctcaaagacagctccaaactggaa
gagttcatcaagacgagcgagagtgaggtccgcttcgatgtggaaacagcgatcaaggtg
cttcgtcaggcgggttactactcccacgctgtgtacctggcagagaagcacatgcaccat
gaatggtacctcaaaatccagctagaggatatcaagaactaccaagaggctctgcgctac
attggaaaactgccttttgatcaggcagagagcaatatgaagcggtatggaaaaatcctt
atgcaccatgtccctaacgagaccacagaattgctgaaggtcctttgcactgattaccgg
ccactgggagacagcgaaggccccgggatgctggaaggaagaaaggctaattcggaggag
ttcattccagtctttgcaaacaactcccgagaactgaaggcttttctggagcacatgact
gaggtgcaggctgactctccgcagggtgtctacgacactttactggaacttcaactccag
aactgggcacatgaacaagatgagcagatcaaggagaagctgcacaatgaagccctcacc
ctcctgaagagcggaaggttcaaaacagtctttgataaggccttggtcttatgtcagatg
cacaatttcaaggatggtgtcctctacctctatgagcagggcaaacttttccaacagatc
atgcactaccacatgcagaatgagcagtacaagaaggtgatcgaggtgtgcgagttgtat
ggagaccaagaggcttgtctgtgggaacaggctctcggctactttgcgcggaaggaggag
gactgcaaagagtatattgctgcagtgctgaaacacatcgagaacaagaatcttatgcct
ccgttgcttgttgtgcagacgctggctcataactccacagccacactgtctgtggttaag
gattatcttgtcaacaagctgcagaagcagagccgccagatagagcaggatgagcagaga
attcacaaataccgagaagaaactacaaggatccgccaggagatcgaagagctaaaagca
aggcccaagatctttcagaagaccaagtgcagcatttgcaccagtgccctggagctgcct
tcagtccacttcctgtgcggtcattccttccaccagcattgctttgaaagctactccgag
agcgattcggaatgtcctacatgcatgccagaaaatcgcaaagtgatggacatgatccga
gcccaggagcagaagcgagatctgcacgaccagtttcagcatcagctcaagtgttccaac
gatggcttttctgttgttgccgactacttcggtcgtggcgtcttcaataagctgaccctc
atcacggacttgccttcgggaaaggcggcgacgcttgaggctggcctgcagcgggacctg
ctcatgcacaccaagcgcagcacctga
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