Strigops habroptila (Kakapo): 115616452
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Entry
115616452 CDS
T08851
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shab04515
]
115616452 (DSCAML1)
Cell adhesion molecules [BR:
shab04515
]
Immunoglobulin superfamily
Other
115616452 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Ig_6
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
115616452
NCBI-ProteinID:
XP_030361540
LinkDB
All DBs
Position
17:complement(1004911..1110458)
Genome browser
AA seq
2039 aa
AA seq
DB search
MWLVTFFLLYSLRKAHAEDVGTSLYFVNDSIQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVRAGR
PVELPCIASGYPNPAVRWIKDGRPLPTDGRWTKRITGLSISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYIIRWYRNTDLVVVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIIMLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRTNQYTMSDGTTVSHMNVTSPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
MLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGN
ESAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTP
SEPGICRFTASPPKPQDSERGKSVAVPIPHRASKSDYCNLPLYAKSEAFFRKPGSEPCPV
VPPREASIRGLARAYPAPARHLTLEPGAKPLGLPPPAPTATTLPQRTLPMPSTTSAAAAA
PASSAAPAPAATEPPAAERGPTHSKVGGSRDSLLEMSTSGVGRSQKQGAGAYSKSYTLV
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttttcctgctgtactctttgcggaaagcacatgctgaagatgtt
ggaaccagcctctactttgtgaacgactctatccagcaggtcaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagcgccgtccttcggtggtacctg
gccacaggcgacgacatctacgatgtgccccacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaatagctttatccacgacaacgactac
ttctgcaccgcggagaactcggctggcaaaatcaggagcccaaatatccgtgttaaagca
gttttcagggaaccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccctcttcagtgcaggaatacgttagtgttgtgtcctgg
gagaaagacaccgtttctatcatcccagaaaataggttttttattacttcttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacgcggcagagcaatggagccaggctctcggtctcagaccca
gcggagtccatccccacgatgctagacagcttccagtccagggaggtgagggcgggccgg
ccggtggagctgccctgcatcgcctcgggataccccaacccggctgtccggtggatcaag
gacgggcgcccgctccccaccgacggccgctggaccaagcgcatcacggggctgagcatc
agcgacctgcgcgtggaggacagcgggacctacatctgcgaggtgaccaacaccttcggg
tccgcagaggtcacggggaccctcacggtcatagaccctctgcgtgtgaccctcacacca
aagaagctcaaaacaggcatcggcagcaccgtcatcctctcttgtgccctcagcgggtcc
cccgagtacatcatccgctggtaccgcaacacggacctcgtggtggtggatgactacatc
tccatccggggcatcagcaacgagaccctcctcatcacagcggcgcagaagagccactct
ggagcctaccagtgctttgccacccgcaagtcccagacagcacaggacttttccatcatc
atgctggaggatgggaccccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctgatgtgcgccgccaagggggccccgccgccgaccgtgacctgg
gcgctggacgacgagcccatcccgcgggacagcgggcaccgcaccaaccagtacaccatg
tcggacggcaccacggtcagccacatgaacgtgacgagcccgcagatcaaggacggcggc
gtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagcatccgagcaatgaagaacataacagcggtagcgggtagggac
actttcatcaactgcagggtgatcgggtacccgtattactccatcaagtggtacaaggac
tctctgctgctgcccgataaccaccgccaagtggtctttgaaaacgggactcttaagctg
atggacgtccagaaaggcatggatgaaggagagtatctgtgcagcgtgctgatccagccc
cagctctccatcagccagagcgtccatgtcacagtgaaagtcccaccgctgatccagccc
tttgagttcccaccagcctccatcgggcagctcctgtacatcccctgtgtggtctcctcc
ggggacatgcccatccacatcacttggaggaaggacgggcacgtcatcctctccggctcc
ggagtcaccatcgagagcaaggagttcatgagctccctgcagatctccagcgtgtccctc
aagcacaacggcaactacacctgcatcgccagcaacgacgctgccacggtcagccgggag
cggcagctcatcgtgcgggtgcctccccgttttgtggtccaacccaacaaccaagatggc
atttacggaaaagctggggtgctgaattgctctgttgatggttacccacctccgaaagtc
atgtggaaacacgcaaaaggaagtggcaatccccagcagtaccaccccatacccctcacg
ggccgcatccagatcctgcccaacagctccctgctcatccgccacgtgctggaggaggac
atcggctactacctctgccaggccagcaacggtgtgggcacagacatcagcaagtccatg
tttctcaccgtgaagatcccagccatgatcacctcccaccccaacaccaccatcgccatc
aaggggcagaccaaggagctcaactgcaccgcgcggggtgagcggcccatcatcatccgc
tgggagaagggcgacaccgtcatcgaccccgaccgcaacatgcgctacgccatcaccacc
aaggacaacggcgacgaggtcatctccactctcaagctgaaaccagctgaccgtggggac
tcggtcttcttctcctgtcatgccatcaactcctatggcgaggacagaggcttgatccag
ctcaccgtccaagagccccctgacccaccagagctggagatccgggaggtgaaggcccgc
agtatgaacctgcgatggacgcagcggtttgatggcaacagcatcatcaccgggttcgat
atcgagtacaagaacaagtcggattcctgggattttaagcagtctacacgcaacatctcc
ccgaccatcaaccaggcgaacatcgtggacctgcacccggcctccgtgtacagcatccgc
atgtactccttcaacaagattgggcgcagtgagccaagcaaggagctcaccatcagcacg
gaggaagcagctcctgatgggcctccgatggacgtcaccttgcagccgatgacatcccag
agcatacaagtcacctggaaggcaccgaagaaggagctgcagaacggggtgatccgtggc
taccagatcggctaccgggagaacagcccgggcagcaacgggcagtacagcatcgtggag
atgaaggccacgggggacagcgaggtctacacgctggacaacctgaagaagttcgcgcag
tatggggtggtggtgcaggcgttcaaccgtgcagggacaggaccatcatccagcgagatc
aatgccaccacgctggaggacgttcccagccagccccccgagaacgtgagggccatctcc
atcacatcggacgtggccgtgatctcctggtcggagcccccgcgcagcaccctcaatggg
gtgctcaagggataccgggtcatcttctggtccctctacatggatggagagtggggtgag
atgcagaacatcacgaccacaagggagcgtgtggagctgcggggcatggagaagttcacc
aactacagcgtgcaggtgctggcgtacacccaggctggcgacggcgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggtcccccggccggcatcaaggctgtcccg
tcctctgccagcagcgtggtggtgtcctggctgccgccggcaaagcccaacggcatcatt
cggaagtacaccatcttctgctccagccccggctcggggcaaccggctcccagcgagtat
gagaccagccctgaccaactcttctaccgcattgcccacctgaaccgcgggcagcagtac
atgctctgggtggctgctgtcacctccgccggccgcggcaacatcagcgagaaggtcacc
atcgagcctgctgggaaagcccctgccaagatcatctcctttggaggcaccgtcaccacc
ccatggatgaaggatgtgaggctgccatgcaactctgttggggagccagtccccgccatc
aagtggaccaaggacagcgaggactctgccatcccagtgacagtggatggccatcgcctg
atccaggccaatggcacgctggtgctgcgctcggtgaaagcagaagactcggggtactac
acctgcaccgctaccaacacgtggggcttcgacaccatcatcatcaacctgcttgtccaa
gtgccccccgaccaacctcgcctgactgtgtccaagacctcggcatcatctatcacactg
gcctggattcctggggacaacgggggcagctccatccgaggctttgtgctccagtactct
gtggacaacagcgaggaatggaaggacgtcttcatcagctcctcggagcgctccttcaag
ctggagagcctcaagtgcggcacctggtacaaggtgaagctggcggccaagaacagcgtc
ggggccggccgcatcagcgagatcatcgaggccaagacccacggcagagagccctccttc
agcaaggaccagcacctcttcacgcacatcaactccacgcacgccaggctgaacctgcag
ggctggagcagcgggggctgccccatcaccgccatcgtgctggaataccggcccaagggc
aactgggtctggcagagcctgcgcaccaacagctccagcgaggtgttcctgacggagctg
cgcgaggcaacgtggtacgagctccgcatgaaggcctgcaacagcgccggctgcggcaac
gagagcgcgcagttcgccacgctggactatgatggcagcaccatcccacccatcaagtct
gcgcaaggggagggggacgacgtgaagaagctcttcaccatcgcctgccctgtgatcctg
gccacgctgggagtagcgctgctcttcatcatccgcaagaagaggaaggagaagcggctg
aagaggcttagagatgccaagagtttggctgaaatgctgatcagcaagaataaccgcagc
ttcgatacgccggtgaaggggcccccgcagggcccccgcttgcacatcgacatcccacgg
gtgcagctcctcatcgaggacaaggaaggcatcaaacagctcggggatgacaaagccacg
atcccggtgactgacacggagttcagccaggcggtgaacccccagagcttttgcaccggc
gtctcgctgcatcatcctgctctgatccagaacacggggcccctcatcgacatgtcagac
atccgccccggcaccaaccctgtgtcaaggaagagcgtcaagtctgcgcacagcacccgc
aaccggtactccagccagtggaccctcaccaagtgccaggcgtccaccccagcacggacc
ctcacctcggactggaggacagtgggctctcagcacggcatcacggtcaccgagagcgac
agctacagcgccagcctctctcaggacacagacaaggggcggaacagcatggtgtcgacg
gagagtgcctcctctacctacgaggagctggcacgcgcctacgagcacgcgaagctggag
gagcagctgcagcacgccaagtttgagatcaccgagtgcttcatctcagacagctcctcg
gaccaaatgaccacgggcacgactgacaacgccgacagcatgacctccatgagcaccccg
tccgagcccggcatctgccgcttcacagcttccccacccaagccccaggacagcgagcgg
ggcaagagcgtggccgtccctatcccgcaccgcgccagcaagagcgactactgcaacctg
ccgctctacgccaagtcggaggccttcttccgcaagccgggcagcgagccgtgcccggtg
gtgccgccacgggaagcctccatccgcgggctggcgcgggcgtaccccgctcccgcacgg
cacctcacgctggagcccggcgccaagcccctggggctgcccccgccggcccccaccgca
accaccttacctcagaggactctgcccatgcccagcaccaccagcgccgctgccgctgcg
cccgccagcagtgccgctccagcgcccgccgccaccgagccccccgccgccgagcggggc
cccacgcactccaaagtggggggctctagggactcgctcctagaaatgagcacatcgggg
gtaggaaggtctcaaaaacagggggctggagcctactccaagtcctacacgctggtgtag
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