Strigops habroptila (Kakapo): 115616545
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Entry
115616545 CDS
T08851
Symbol
ITGB4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04382
Cornified envelope formation
shab04510
Focal adhesion
shab04512
ECM-receptor interaction
shab04810
Regulation of actin cytoskeleton
shab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115616545 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115616545 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115616545 (ITGB4)
04810 Regulation of actin cytoskeleton
115616545 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115616545 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shab04147
]
115616545 (ITGB4)
04515 Cell adhesion molecules [BR:
shab04515
]
115616545 (ITGB4)
04090 CD molecules [BR:
shab04090
]
115616545 (ITGB4)
Exosome [BR:
shab04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115616545 (ITGB4)
Exosomal proteins of bladder cancer cells
115616545 (ITGB4)
Cell adhesion molecules [BR:
shab04515
]
Integrins
Integrin beta subunits
115616545 (ITGB4)
CD molecules [BR:
shab04090
]
Proteins
115616545 (ITGB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
I-EGF_1
EGF_integrin
EGF_Teneurin
PSI_integrin
EGF_2
EGF_TEN
vWA_SIBA-E
SEA
Motif
Other DBs
NCBI-GeneID:
115616545
NCBI-ProteinID:
XP_030361789
LinkDB
All DBs
Position
14:complement(141988..174516)
Genome browser
AA seq
1742 aa
AA seq
DB search
MRRKRMDVLPRMCAGLLFLSLLCATGLCQRSKIDNRCVLSQAKSCTECIRVDKDCSFCTD
ESFEEPRCNLRENLLRYGCAEASIVYTRGEMQTQQNFSINTSLQRTQVSPQGMFMRLRAG
EEMSFDMDVFQPLESPVDLYILMDFSYSMSDDLDNLKSMGQNLAEFLQALTSNYTIGFGK
FVDKVSSPQTDMRPEKLREPWNNADSPFSFKNVIRLTSNINYFSQELRKERISGNLDAPE
GGFDAILQTAVCKDKIGWRKDSTHLLVFSTESAFHYEADGTNVLAGILARNDEHCHLDAN
GTYVYDTKQDYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQEDSS
NIVELLRTAFERIRTKMDIRADFVPKAMKTEFTSLMYEKTESGSFHITRGEVGKFNVRIK
ALEYVGGQHVCSLPERDRQGVIQVKPTSLSDSLKITASVICDMCPCEQQQEFNSPMCSFH
GDFVCGQCICHPGWRGDTCDCSPASSPNNEVCIRPGDVEPCSGRGECLCGKCQCYSEDLT
QRFDGAFCQYDVLQCPRTSGFLCNDRGRCSKGACVCESGWEGPGCECPTSNDTCIDSRGG
ICNNHGRCECGRCICDKASLYTSSTCEISYSLGFQAVCESIRDCVRCQAWGTGNMKGNCS
TCHLQLQMVEELKKEEASEYCSFQDEDDDCTYHYTLEGDPNVLPNTTVHVQKKKECPPGN
FLWLIPLLIFLILLLGLLLLLCWKFCACCKACLALLPCCAQGRTVGFKEDHYMLRHGLMS
SDHLDTPMVRSGSLKGCDTVRWKINNNVHKQGFTSLAAANPKDLIPYGLSLRLTRLFTQN
LVKPDTRECEQLRKEVEENLNDIFKHIPGCHKLQQTKFRLQPNSGKRQDHTIVDTVLTAP
RSAKPEIIKVMEKHVAHEAFNDLKVSPGYYTVTSDQDAHGMVEFQEAVELVDVRVPLFIR
EDDDDEKQLQVEAIDVPTGIAEIGRRIVSITIIKEQASSLITFLQPAYSHSRFDKLAKIP
VLREIIDNGKSQVTYRTRDLTAKNGRDYIFTEGDLVFQPGETRKEVQVPLLELTEIDTLL
HNYQLKQFAIDLLHPKYGTKIGRYPQTTVTIADPEVVDGVSSMTGLGQVSQSPKGRLSAP
LNPNAKALSSREISFSWFPPPGKPLGYKVKYWIQGDPESEAHLIDVKAPSVELSNLYPFC
DYEMQVCAYNTMGEGAYSDIIHCHTLEDVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEI
TAYEVSYGLVNEDNIPIGPVKKVLVEDPKKRMVLIENLRESQPYRYMVKARNGAGWGPER
EATINLATQPKRPMSIPIIPDVPIIDAEGGEDYDSYLMYSADVLRSAAGSKHPSVSDDSE
HLLNGRVDFFPGSGSGTLTRTTNTSYHQLSSHMQQEHRVMGSSSLTRDYSTMLMGHDSRL
PLGVPDTPTRLVFSALGPTSLKVSWQEPHCDKEVQGYSVHYQLLNGGEVHRLTIPNPSQN
SVVVEDLLPNHSYIFKVKAQSEEGWGPEREGVITIESQVDPQSPLSPVPGSPFTLSTPSA
PGPLVFTALSPDSLQLSWERPRKPNGSILGYMVTCEMLHGGGEPRNIYVEGDNPETTLTV
PHLNENVPYKFKVQAKTTQGFGPEREGIITIESQDGGTFSQFGGQQYMREEVYNFPTEYT
TKTSISHSSLDPHFTDGMLLTTQRVESASSTLTKQVTKEFVSRTVMSSGTLTKQMERQFY
EA
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaagaggatggatgtgctgccacggatgtgtgctgggctgctcttcctgtcc
ctgctctgtgccactggcctctgccaaagaagcaaaatagataaccgctgtgtgctgtcc
caggcaaagagctgtaccgagtgcatccgagtggataaggactgctccttctgcactgat
gagagctttgaagagcctcgttgcaacttgcgggagaacttgctgcggtacggctgcgcg
gaggccagcatcgtgtacaccaggggcgagatgcagacccagcagaatttcagtatcaac
acatcactgcagagaacccaggtgtctccccagggcatgttcatgcgactgcgagctggg
gaggagatgagcttcgacatggatgtcttccagcccttggagagccctgtggatctctac
atcctcatggacttctcctactctatgtctgatgatctagacaacctcaaaagcatgggc
caaaacctagcggagttcctgcaagccctgacctccaattacaccattggatttggcaag
tttgtggacaaagtctcatcccctcagacagatatgagacctgagaagctccgtgagccc
tggaacaatgctgattcccccttctcattcaagaatgtcatccgtctgaccagcaatatc
aactacttcagccaggagctcaggaaagagcgcatctccggcaaccttgatgcccctgag
ggcggctttgatgcgatcctgcagacagctgtttgcaaggataagattggctggaggaag
gacagcactcacctgcttgtcttctccactgaatctgcctttcactatgaagctgatggt
accaacgtcctggcaggaatcctggcaagaaatgatgagcactgtcacctagatgccaat
ggcacatatgtgtatgataccaaacaggactatccttcagtgcccaccctggtgcgcctg
ctaggccaacacaacatcatccccatctttgctgtcaccaaccactcctacagctactat
gagaagctgcacaagtatttccccatctctgagattggagtgctccaggaggactcttcc
aacatcgtggagctgctccgcacagcctttgagcgaatccgcaccaagatggatatccgg
gctgactttgtccccaaagccatgaagacagagttcacctccttgatgtatgaaaagaca
gaatctggctccttccacattacccgtggggaagtgggcaagttcaatgtgcgcattaag
gcgcttgagtacgttggcgggcagcacgtctgcagcctccctgagagagaccggcaggga
gttatccaagtgaaacccacatccctgagtgacagcctcaaaatcacagcctctgtcatc
tgtgacatgtgtccttgtgaacagcaacaagagtttaactcacccatgtgcagcttccat
ggggactttgtttgtggacagtgcatctgccatccgggctggcgaggggacacatgtgac
tgctccccagcatcctcccccaacaacgaagtctgcatccgccctggggatgtggagccg
tgctcaggccggggtgagtgcctgtgtgggaagtgccagtgctactccgaggacctgacg
cagcgcttcgatggggcgttctgccagtacgatgtcctgcagtgcccacgtacctccggc
ttcctctgcaatgatcgtggccgctgctccaagggtgcatgtgtgtgtgagagcggctgg
gaggggccaggctgcgaatgccccacgagcaacgacacctgcatcgacagcagagggggt
atttgcaataatcatgggagatgtgaatgcggcagatgtatctgtgacaaggcttcgctg
tacaccagctccacctgcgaaatcagctactccctgggcttccaggctgtgtgtgagagc
atccgggactgcgttcgctgccaggcctggggaacaggcaatatgaaagggaactgcagc
acgtgccacctccagctccagatggtggaagagctaaagaaagaggaggccagtgaatac
tgctcattccaggatgaggacgacgattgcacataccactacaccctggagggagatccc
aatgtcctccccaacaccactgtccatgtccagaagaaaaaagagtgcccaccggggaac
ttcctctggctcatcccgctgctcatcttcctcattctgctcctggggctgctgctgctg
ctctgctggaagttctgtgcctgctgcaaggcttgcctggctctgcttccctgctgcgca
caaggtcgcactgttggcttcaaggaggaccactacatgcttcgccacggcctcatgtcc
tctgaccacctggatacgcccatggtccgcagtgggtcccttaagggttgcgacaccgtc
cgctggaagatcaacaacaatgttcacaaacagggcttcacctcccttgctgccgccaac
cctaaagatctcattccctatgggctgtctctgaggctgacccggcttttcacgcagaac
ctggtgaagccggacactcgagagtgtgagcagctgcgcaaggaagtggaggagaacctg
aacgacattttcaagcacatccctggctgccacaagctccagcagaccaagttcaggtta
cagcccaattctgggaaaaggcaggaccacaccattgtggacacagtgctcactgcccct
cgctcagccaagccagagatcatcaaagtgatggaaaagcatgttgcccacgaggctttc
aatgacctgaaggtttcaccaggttattacactgtgacctcagaccaagatgctcacggg
atggtggagttccaagaggctgtggagctggtggatgtgcgtgtcccactcttcattagg
gaggatgatgatgatgagaagcaactgcaggtagaggccattgatgtacctactggcatt
gcagagattggacgcaggattgttagcatcaccatcatcaaagaacaagcgagcagcctc
atcaccttcttgcagccagcctattcccacagtcgctttgataagctggccaagatccct
gtcctccgggagatcatagacaacgggaaatcccaagtcacctacaggacccgggatctc
accgccaagaatggcagagactacatcttcacagagggtgacctggtcttccagcctggg
gagacccgaaaggaggtgcaggtccccttgctggagctgactgaaatagataccctcctg
cacaactaccagctcaagcaatttgctattgatctcctccaccccaagtatggcaccaag
attggccggtacccccagaccacggtgaccatcgccgacccagaggtggtggatggtgtc
agctcgatgactggcctgggccaggtctcccagtccccaaaaggccgcctgagtgcacca
cttaatcccaatgccaaagctctcagctccagggaaatcagcttcagctggtttcctcca
ccaggaaaacctctggggtacaaggtgaaatactggatccagggggaccccgagtcagaa
gcccatcttatcgatgtcaaagcaccatcagtagagctgagtaacctctaccccttctgc
gactatgagatgcaagtctgtgcctacaacaccatgggtgaaggtgcttactctgacatc
atccactgccacacgcttgaggacgtccccagtgagcccggccgcttggctttcaacgtt
gtgtcttccactgtgacacagctgagctgggctgagcctgcagaaaccaatggggagatc
acagcttatgaagtcagttacggacttgtcaacgaggacaacatacccattggcccagtg
aagaaggtgctggttgaagacccaaagaagcgcatggtgctgatagaaaacctgcgggag
tcccagccctatcgctacatggtgaaagccagaaatggtgctggctggggacctgagaga
gaagccaccatcaaccttgccacacagcccaagcgcccgatgtccatccccatcatccct
gatgtccccatcattgatgcagagggaggtgaggactatgacagctacctgatgtacagt
gcagatgtgcttcgctctgcagctggcagcaagcatcccagtgtctccgatgattcagaa
cacttgctgaatggccgggtagacttcttccctggcagtggcagtggcacactgaccagg
acaacgaacaccagctaccatcagctgagctcacacatgcagcaggagcacagagtgatg
gggagctcctcactgacaagagactactccacgatgctgatggggcatgactccaggctg
ccactgggtgttcccgacacccccacgcgcctggtgttctctgccctgggacctacctcc
ctgaaggtgagctggcaggagccacactgcgacaaggaggtgcagggctacagcgtgcac
taccagctcctcaatggaggagaggttcaccgactcaccatccccaaccccagccagaac
tcagtggtggtagaggacctgctgcccaaccactcctacatcttcaaggtgaaagcacag
agtgaggaaggctgggggcccgagagggaaggagtcatcaccatagagtcccaggtggac
ccgcaaagcccactcagccctgtaccaggttcacccttcacgctgagcacacccagtgct
cctgggccacttgtgttcactgccctcagccctgactccctgcagctcagctgggagaga
ccccgcaagcccaatgggtccatcttgggctacatggtcacctgtgagatgctgcatgga
ggaggggagcccaggaatatctatgttgaaggggacaatcctgaaactaccctgactgtg
ccacacctgaatgagaatgtcccatacaagttcaaagtgcaagccaagaccacgcaaggc
tttgggccagagagagaaggcatcatcaccattgaatctcaggatggaggcactttctcc
cagtttggaggacagcagtacatgagagaggaagtgtacaacttcccaacagaatacacc
accaaaaccagcatcagccattcctctctggatccccacttcacagacggcatgctcctg
acaacccagcgagtggagagcgccagcagcaccctcaccaaacaggtcaccaaagagttt
gtgagccggaccgtgatgtccagtgggaccctcaccaaacagatggaaaggcaattttat
gaggcctga
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integrated database retrieval system
